RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 RXFP4Q8TDU9 374 aa11.96□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 SDF2Q99470 211 aa11.96□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 PRSS50Q9UI38 385 aa11.96□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 C2CD4DB7Z1M9 353 aa11.96□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 PF4V1P10720 104 aa11.96□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 CD80P33681 288 aa11.96□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 PYCR3Q53H96 274 aa11.96□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 WDR74Q6RFH5 385 aaPredicted RBP11.96□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 ZC3H3Q8IXZ2 948 aaKnown RBP11.96□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 IGKV3D-11A0A0A0MRZ8 115 aa11.96□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 TRIM77I1YAP6 450 aa11.96□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 ST8SIA5O15466 376 aa11.96□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 IGKV3-11P04433 115 aa11.96□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 CCL2P13500 99 aa11.96□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 MN1Q10571 1320 aaPredicted RBP11.96□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 CEBPEQ15744 281 aa11.96□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 OR6S1Q8NH40 331 aa11.96□□□□□ -0.49
NPHP3-ACAD11-201ENST00000471702 GYPAP02724 150 aa11.96□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 CD22P20273 847 aa11.96□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 CST5P28325 142 aaPredicted RBP11.96□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 C16orf52Q8NHV5 167 aa11.96□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 NUDCD2Q8WVJ2 157 aa11.96□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 MMP17Q9ULZ9 603 aa11.96□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 RGPD1P0DJD0 1748 aa11.96□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 DSCR3O14972 297 aa11.96□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 RPL18Q07020 188 aaKnown RBP11.96□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 OR1C1Q15619 314 aa11.96□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 ZNF683Q8IZ20 524 aa11.96□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 PRR14LQ5THK1 2151 aa11.96□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 IGKV3OR2-268A0A0C4DH90 116 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 CTXN2P0C2S0 81 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 ZBTB25P24278 435 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 RPUSD3Q6P087 351 aaKnown RBP11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 KCTD12Q96CX2 325 aaKnown RBP11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 SHISA4Q96DD7 197 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 OR1A1Q9P1Q5 309 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 M0R1X1 148 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 PMS2P2O95744 297 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 OR52I2Q8NH67 350 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 A4GALTQ9NPC4 353 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 DAPP1Q9UN19 280 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 A0A1W2PPQ1 181 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 ZNF195O14628 629 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 FGF17O60258 216 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 DUS4LO95620 317 aaKnown RBP11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 MMP11P24347 488 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 RFX2P48378 723 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 SELENBP1Q13228 472 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 ENDOGQ14249 297 aaKnown RBP11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 CEACAM16Q2WEN9 425 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 ETFRF1Q6IPR1 90 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 Q7L0L9 218 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 MARC2Q969Z3 335 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 TEX37Q96LM6 180 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 SLC25A21Q9BQT8 299 aaPredicted RBP11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 ZNF416Q9BWM5 594 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 TMPRSS13Q9BYE2 586 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 CXCL16Q9H2A7 254 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 EVA1AQ9H8M9 152 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 ARNTLO00327 626 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 AQP8O94778 261 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 HPP00738 406 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 NID1P14543 1247 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 TMEM240Q5SV17 173 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 COL5A1-AS1Q5SY13 56 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 COMMD1Q8N668 190 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 OR13D1Q8NGV5 346 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 FREM1Q5H8C1 2179 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 AKR1C3P42330 323 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 RELBQ01201 579 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 ZNF620Q6ZNG0 422 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 KMT5CQ86Y97 462 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 TMEM116Q8NCL8 245 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 ABHD14AQ9BUJ0 271 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 CSNK1G1Q9HCP0 422 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 LYRM4Q9HD34 91 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 KLK4Q9Y5K2 254 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 WNK1Q9H4A3 2382 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 IGKV3D-15A0A087WSY6 115 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 RFPL4AA6NLU0 287 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 RFPL4AL1F8VTS6 287 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 CST7O76096 145 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 IGKV3-15P01624 115 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 RETREG3Q86VR2 466 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 NRG4Q8WWG1 115 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 FAHD2AQ96GK7 314 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 C11orf68Q9H3H3 251 aaKnown RBP11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 NEURL4Q96JN8 1562 aa11.95□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 DHRS3O75911 302 aa11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 ATP1B1P05026 303 aa11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 RAB1AP62820 205 aa11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 IZUMO4Q1ZYL8 232 aa11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 ZNF787Q6DD87 383 aa11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 TMED6Q8WW62 240 aa11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 SMIM7Q9BQ49 75 aa11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 ADAT1Q9BUB4 502 aaKnown RBP11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 TMPRSS2O15393 492 aa11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 PPP1R17O96001 155 aa11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 NUBP1P53384 320 aa11.94□□□□□ -0.5
NPHP3-ACAD11-201ENST00000471702 CYHR1Q6ZMK1 362 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms