RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 ZNF581Q9P0T4 197 aa8.36□□□□□ -1.07
SF3A1-207ENST00000471342 DUSP13Q9UII6 198 aa8.36□□□□□ -1.07
SF3A1-207ENST00000471342 AK6Q9Y3D8 172 aaKnown RBP8.36□□□□□ -1.07
SF3A1-207ENST00000471342 CACNG2Q9Y698 323 aa8.36□□□□□ -1.07
SF3A1-207ENST00000471342 HEATR1Q9H583 2144 aaKnown RBP8.35□□□□□ -1.07
SF3A1-207ENST00000471342 A0A0B4J203 849 aa8.35□□□□□ -1.07
SF3A1-207ENST00000471342 LOC100506127A0A0U1RQW1 187 aa8.35□□□□□ -1.07
SF3A1-207ENST00000471342 GGT3PA6NGU5 568 aa8.35□□□□□ -1.07
SF3A1-207ENST00000471342 CYSRT1A8MQ03 144 aa8.35□□□□□ -1.07
SF3A1-207ENST00000471342 FOXI3A8MTJ6 420 aaPredicted RBP8.35□□□□□ -1.07
SF3A1-207ENST00000471342 C17orf100A8MU93 164 aa8.35□□□□□ -1.07
SF3A1-207ENST00000471342 B9A039 149 aa8.35□□□□□ -1.07
SF3A1-207ENST00000471342 SULT1B1O43704 296 aa8.35□□□□□ -1.07
SF3A1-207ENST00000471342 MTRF1O75570 445 aaKnown RBP8.35□□□□□ -1.07
SF3A1-207ENST00000471342 RP2O75695 350 aa8.35□□□□□ -1.07
SF3A1-207ENST00000471342 RHBDL1O75783 438 aa8.35□□□□□ -1.07
SF3A1-207ENST00000471342 HPXP02790 462 aa8.35□□□□□ -1.07
SF3A1-207ENST00000471342 SLC2A2P11168 524 aaPredicted RBP8.35□□□□□ -1.07
SF3A1-207ENST00000471342 PAX1P15863 534 aa8.35□□□□□ -1.07
SF3A1-207ENST00000471342 AZGP1P25311 298 aaKnown RBP8.35□□□□□ -1.07
SF3A1-207ENST00000471342 CFHR2P36980 270 aa8.35□□□□□ -1.07
SF3A1-207ENST00000471342 GATA4P43694 442 aa8.35□□□□□ -1.07
SF3A1-207ENST00000471342 HSD17B12Q53GQ0 312 aa8.35□□□□□ -1.07
SF3A1-207ENST00000471342 DNM1P46Q6ZS02 220 aa8.35□□□□□ -1.07
SF3A1-207ENST00000471342 CSNK2A3Q8NEV1 391 aa8.35□□□□□ -1.07
SF3A1-207ENST00000471342 OR10AD1Q8NGE0 317 aa8.35□□□□□ -1.07
SF3A1-207ENST00000471342 OR5A2Q8NGI9 324 aa8.35□□□□□ -1.07
SF3A1-207ENST00000471342 YIPF5Q969M3 257 aa8.35□□□□□ -1.07
SF3A1-207ENST00000471342 DGCR14Q96DF8 476 aaKnown RBP8.35□□□□□ -1.07
SF3A1-207ENST00000471342 MEGF10Q96KG7 1140 aa8.35□□□□□ -1.07
SF3A1-207ENST00000471342 SORCS2Q96PQ0 1159 aa8.35□□□□□ -1.07
SF3A1-207ENST00000471342 KCNK15Q9H427 330 aa8.35□□□□□ -1.07
SF3A1-207ENST00000471342 HES4Q9HCC6 221 aa8.35□□□□□ -1.07
SF3A1-207ENST00000471342 SNTG1Q9NSN8 517 aa8.35□□□□□ -1.07
SF3A1-207ENST00000471342 CBLN4Q9NTU7 201 aa8.35□□□□□ -1.07
SF3A1-207ENST00000471342 MTCH1Q9NZJ7 389 aa8.35□□□□□ -1.07
SF3A1-207ENST00000471342 CGGBP1Q9UFW8 167 aaPredicted RBP8.35□□□□□ -1.07
SF3A1-207ENST00000471342 SSR3Q9UNL2 185 aa8.35□□□□□ -1.07
SF3A1-207ENST00000471342 SPEF1Q9Y4P9 236 aa8.35□□□□□ -1.07
SF3A1-207ENST00000471342 MPC1Q9Y5U8 109 aa8.35□□□□□ -1.07
SF3A1-207ENST00000471342 HECTD1Q9ULT8 2610 aa8.35□□□□□ -1.07
SF3A1-207ENST00000471342 SPG11Q96JI7 2443 aa8.35□□□□□ -1.07
SF3A1-207ENST00000471342 AKAP6Q13023 2319 aa8.34□□□□□ -1.07
SF3A1-207ENST00000471342 H7C417 338 aa8.34□□□□□ -1.07
SF3A1-207ENST00000471342 SYNGR1O43759 233 aa8.34□□□□□ -1.07
SF3A1-207ENST00000471342 NOS1APO75052 506 aaPredicted RBP8.34□□□□□ -1.07
SF3A1-207ENST00000471342 LY6HO94772 140 aa8.34□□□□□ -1.07
SF3A1-207ENST00000471342 CDRT1O95170 752 aa8.34□□□□□ -1.07
SF3A1-207ENST00000471342 SERPINA3P01011 423 aa8.34□□□□□ -1.07
SF3A1-207ENST00000471342 ACAA1P09110 424 aaPredicted RBP8.34□□□□□ -1.07
SF3A1-207ENST00000471342 COX6B1P14854 86 aa8.34□□□□□ -1.07
SF3A1-207ENST00000471342 ZNF12P17014 697 aa8.34□□□□□ -1.07
SF3A1-207ENST00000471342 ZNF182P17025 639 aaPredicted RBP8.34□□□□□ -1.07
SF3A1-207ENST00000471342 EGR1P18146 543 aa8.34□□□□□ -1.07
SF3A1-207ENST00000471342 OR3A4PP47883 348 aa8.34□□□□□ -1.07
SF3A1-207ENST00000471342 NPBWR2P48146 333 aa8.34□□□□□ -1.07
SF3A1-207ENST00000471342 PPOXP50336 477 aa8.34□□□□□ -1.07
SF3A1-207ENST00000471342 RPS23P62266 143 aaKnown RBP8.34□□□□□ -1.07
SF3A1-207ENST00000471342 UNC119Q13432 240 aa8.34□□□□□ -1.07
SF3A1-207ENST00000471342 KISS1Q15726 138 aa8.34□□□□□ -1.07
SF3A1-207ENST00000471342 PRAMEF6Q5VXH4 476 aa8.34□□□□□ -1.07
SF3A1-207ENST00000471342 ZNF826PQ6ZT77 177 aa8.34□□□□□ -1.07
SF3A1-207ENST00000471342 MOB3CQ70IA8 216 aa8.34□□□□□ -1.07
SF3A1-207ENST00000471342 CDH26Q8IXH8 852 aa8.34□□□□□ -1.07
SF3A1-207ENST00000471342 OR5H6Q8NGV6 325 aa8.34□□□□□ -1.07
SF3A1-207ENST00000471342 RAB2BQ8WUD1 216 aa8.34□□□□□ -1.07
SF3A1-207ENST00000471342 ITLN1Q8WWA0 313 aa8.34□□□□□ -1.07
SF3A1-207ENST00000471342 AQP3Q92482 292 aa8.34□□□□□ -1.07
SF3A1-207ENST00000471342 FBXW5Q969U6 566 aa8.34□□□□□ -1.07
SF3A1-207ENST00000471342 SLC25A46Q96AG3 418 aa8.34□□□□□ -1.07
SF3A1-207ENST00000471342 SEH1LQ96EE3 360 aa8.34□□□□□ -1.07
SF3A1-207ENST00000471342 MIXL1Q9H2W2 232 aa8.34□□□□□ -1.07
SF3A1-207ENST00000471342 CLEC4MQ9H2X3 399 aaPredicted RBP8.34□□□□□ -1.07
SF3A1-207ENST00000471342 METTL17Q9H7H0 456 aaPredicted RBP8.34□□□□□ -1.07
SF3A1-207ENST00000471342 TMEM138Q9NPI0 162 aa8.34□□□□□ -1.07
SF3A1-207ENST00000471342 TMEM100Q9NV29 134 aa8.34□□□□□ -1.07
SF3A1-207ENST00000471342 ZNF701Q9NV72 531 aaPredicted RBP8.34□□□□□ -1.07
SF3A1-207ENST00000471342 RSL24D1Q9UHA3 163 aaKnown RBP8.34□□□□□ -1.07
SF3A1-207ENST00000471342 POLQO75417 2590 aa8.34□□□□□ -1.07
SF3A1-207ENST00000471342 CENPEQ02224 2701 aa8.34□□□□□ -1.07
SF3A1-207ENST00000471342 A0A0A6YYD4 124 aa8.33□□□□□ -1.08
SF3A1-207ENST00000471342 IGHV3-64DA0A0J9YX35 117 aa8.33□□□□□ -1.08
SF3A1-207ENST00000471342 A0A1W2PP11 408 aa8.33□□□□□ -1.08
SF3A1-207ENST00000471342 IFITM5A6NNB3 132 aa8.33□□□□□ -1.08
SF3A1-207ENST00000471342 TMEM14DPA8MWL7 114 aa8.33□□□□□ -1.08
SF3A1-207ENST00000471342 SLC17A2O00624 439 aa8.33□□□□□ -1.08
SF3A1-207ENST00000471342 TIMM8AO60220 97 aaPredicted RBP8.33□□□□□ -1.08
SF3A1-207ENST00000471342 PAHP00439 452 aa8.33□□□□□ -1.08
SF3A1-207ENST00000471342 IL1AP01583 271 aa8.33□□□□□ -1.08
SF3A1-207ENST00000471342 MAS1P04201 325 aa8.33□□□□□ -1.08
SF3A1-207ENST00000471342 SFTPBP07988 381 aa8.33□□□□□ -1.08
SF3A1-207ENST00000471342 COL8A2P25067 703 aa8.33□□□□□ -1.08
SF3A1-207ENST00000471342 GCH1P30793 250 aa8.33□□□□□ -1.08
SF3A1-207ENST00000471342 ZNF81P51508 661 aa8.33□□□□□ -1.08
SF3A1-207ENST00000471342 GPM6AP51674 278 aa8.33□□□□□ -1.08
SF3A1-207ENST00000471342 FUT6P51993 359 aa8.33□□□□□ -1.08
SF3A1-207ENST00000471342 EFNB2P52799 333 aa8.33□□□□□ -1.08
SF3A1-207ENST00000471342 PDZK1IP1Q13113 114 aa8.33□□□□□ -1.08
SF3A1-207ENST00000471342 CNPY1Q3B7I2 92 aa8.33□□□□□ -1.08
SF3A1-207ENST00000471342 PAMR1Q6UXH9 720 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms