RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 PPCDCQ96CD2 204 aa2.08□□□□□ -2.08
UBXN4-206ENST00000470687 PIK3IP1Q96FE7 263 aa2.08□□□□□ -2.08
UBXN4-206ENST00000470687 C4orf36Q96KX1 117 aa2.08□□□□□ -2.08
UBXN4-206ENST00000470687 AMDHD1Q96NU7 426 aa2.08□□□□□ -2.08
UBXN4-206ENST00000470687 MS4A4EQ96PG1 132 aa2.08□□□□□ -2.08
UBXN4-206ENST00000470687 RBM14Q96PK6 669 aaKnown RBP2.08□□□□□ -2.08
UBXN4-206ENST00000470687 DHRS9Q9BPW9 319 aa2.08□□□□□ -2.08
UBXN4-206ENST00000470687 PYGO2Q9BRQ0 406 aa2.08□□□□□ -2.08
UBXN4-206ENST00000470687 POTEKPQ9BYX7 375 aa2.08□□□□□ -2.08
UBXN4-206ENST00000470687 REG4Q9BYZ8 158 aa2.08□□□□□ -2.08
UBXN4-206ENST00000470687 ROPN1BQ9BZX4 212 aaPredicted RBP2.08□□□□□ -2.08
UBXN4-206ENST00000470687 ACTR6Q9GZN1 396 aa2.08□□□□□ -2.08
UBXN4-206ENST00000470687 NMUR2Q9GZQ4 415 aa2.08□□□□□ -2.08
UBXN4-206ENST00000470687 LIME1Q9H400 295 aa2.08□□□□□ -2.08
UBXN4-206ENST00000470687 DSN1Q9H410 356 aa2.08□□□□□ -2.08
UBXN4-206ENST00000470687 REEP4Q9H6H4 257 aa2.08□□□□□ -2.08
UBXN4-206ENST00000470687 FOLH1BQ9HBA9 442 aa2.08□□□□□ -2.08
UBXN4-206ENST00000470687 ESM1Q9NQ30 184 aa2.08□□□□□ -2.08
UBXN4-206ENST00000470687 NANSQ9NR45 359 aa2.08□□□□□ -2.08
UBXN4-206ENST00000470687 CBLN4Q9NTU7 201 aa2.08□□□□□ -2.08
UBXN4-206ENST00000470687 EXD2Q9NVH0 621 aa2.08□□□□□ -2.08
UBXN4-206ENST00000470687 SMPD3Q9NY59 655 aaPredicted RBP2.08□□□□□ -2.08
UBXN4-206ENST00000470687 MRPL39Q9NYK5 338 aaKnown RBP2.08□□□□□ -2.08
UBXN4-206ENST00000470687 FBXL3Q9UKT7 428 aa2.08□□□□□ -2.08
UBXN4-206ENST00000470687 B9D1Q9UPM9 204 aa2.08□□□□□ -2.08
UBXN4-206ENST00000470687 SLC35A3Q9Y2D2 325 aa2.08□□□□□ -2.08
UBXN4-206ENST00000470687 HDGFL3Q9Y3E1 203 aa2.08□□□□□ -2.08
UBXN4-206ENST00000470687 RNF115Q9Y4L5 304 aa2.08□□□□□ -2.08
UBXN4-206ENST00000470687 GMPPBQ9Y5P6 360 aa2.08□□□□□ -2.08
UBXN4-206ENST00000470687 TEP1Q99973 2627 aaKnown RBP2.08□□□□□ -2.08
UBXN4-206ENST00000470687 AKAP6Q13023 2319 aa2.08□□□□□ -2.08
UBXN4-206ENST00000470687 HEATR1Q9H583 2144 aaKnown RBP2.08□□□□□ -2.08
UBXN4-206ENST00000470687 RTTNQ86VV8 2226 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 ITPR3Q14573 2671 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 HIVEP1P15822 2718 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 HEATR5AQ86XA9 2040 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 IGHV4-30-2A0A087WSY4 118 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 LOC102725191A0A1B0GVB3 256 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 A0A1W2PP18 115 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 OR5H1A6NKK0 313 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 A8MT66 165 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 TRIM49D1C9J1S8 452 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 H7C417 338 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 SULT2B1O00204 365 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 SDHDO14521 159 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 AZIN1O14977 448 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 PPIHO43447 177 aaKnown RBP2.07□□□□□ -2.08
UBXN4-206ENST00000470687 OR2T1O43869 369 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 RAMP1O60894 148 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 MRPL33O75394 65 aaKnown RBP2.07□□□□□ -2.08
UBXN4-206ENST00000470687 BANF1O75531 89 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 KCNK2O95069 426 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 NXPH4O95158 308 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 UTS2O95399 124 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 OXSR1O95747 527 aaPredicted RBP2.07□□□□□ -2.08
UBXN4-206ENST00000470687 LY6G6DO95868 133 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 IL3P08700 152 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 GGT1P19440 569 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 HNF1AP20823 631 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 TUBG1P23258 451 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 GATA2P23769 480 aaPredicted RBP2.07□□□□□ -2.08
UBXN4-206ENST00000470687 UCP1P25874 307 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 RPL4P36578 427 aaKnown RBP2.07□□□□□ -2.08
UBXN4-206ENST00000470687 HPCAL1P37235 193 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 CCT3P49368 545 aaKnown RBP2.07□□□□□ -2.08
UBXN4-206ENST00000470687 EVX1P49640 407 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 EFNA4P52798 201 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 SUCLG1P53597 346 aaKnown RBP2.07□□□□□ -2.08
UBXN4-206ENST00000470687 MFAP2P55001 183 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 SH3BGRP55822 239 aaPredicted RBP2.07□□□□□ -2.08
UBXN4-206ENST00000470687 PRPS1P60891 318 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 SLC35A1P78382 337 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 MRPS11P82912 194 aaKnown RBP2.07□□□□□ -2.08
UBXN4-206ENST00000470687 H3F3AP84243 136 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 VLDLRP98155 873 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 ATXN7L3Q14CW9 347 aaPredicted RBP2.07□□□□□ -2.08
UBXN4-206ENST00000470687 ZNF146Q15072 292 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 CD226Q15762 336 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 ZNF141Q15928 474 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 MOGQ16653 247 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 PLPPR5Q32ZL2 321 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 ARHGAP11BQ3KRB8 267 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 TMEM176BQ3YBM2 270 aaPredicted RBP2.07□□□□□ -2.08
UBXN4-206ENST00000470687 KCTD21Q4G0X4 260 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 ATP6AP1LQ52LC2 224 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 TTC23Q5W5X9 447 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 OLFML2AQ68BL7 652 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 CYB5R2Q6BCY4 276 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 ADNP2Q6IQ32 1131 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 FAAP20Q6NZ36 180 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 C3orf33Q6P1S2 294 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 ZNF613Q6PF04 617 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 CLEC2AQ6UVW9 174 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 ZYG11AQ6WRX3 759 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 DNM1P46Q6ZS02 220 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 TMPPEQ6ZT21 453 aa2.07□□□□□ -2.08
UBXN4-206ENST00000470687 NCCRP1Q6ZVX7 275 aaPredicted RBP2.07□□□□□ -2.08
UBXN4-206ENST00000470687 EIF3MQ7L2H7 374 aaKnown RBP2.07□□□□□ -2.08
UBXN4-206ENST00000470687 NUFIP2Q7Z417 695 aaKnown RBP2.07□□□□□ -2.08
UBXN4-206ENST00000470687 GRINAQ7Z429 371 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms