RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 C1QTNF5Q9BXJ0 243 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 PBOV1Q9GZY1 135 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 OR51B6Q9H340 312 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 NIPAL2Q9H841 368 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 AKIP1Q9NQ31 210 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 TRIM36Q9NQ86 728 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 SNTG1Q9NSN8 517 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 TBCCD1Q9NVR7 557 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 NDUFB11Q9NX14 153 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 NUFIP1Q9UHK0 495 aaKnown RBP4.05□□□□□ -1.76
SF3B1-208ENST00000470268 OR52A1Q9UKL2 312 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 TRBV2A0A0J9YWF9 115 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 A0A1B0GTI1 187 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.05□□□□□ -1.76
SF3B1-208ENST00000470268 A0A1W2PPK0 400 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 A0A1W2PPR1 153 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 A1L4Q6 167 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 DEFB108AA8MXU0 73 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 ATP6V1G2-DDX39BF2Z307 99 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 GPRIN2O60269 458 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 LMX1BO60663 402 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 SMPD2O60906 423 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 PLAUP00749 431 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 LCATP04180 440 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 ANXA2P07355 339 aaKnown RBP4.05□□□□□ -1.76
SF3B1-208ENST00000470268 TACSTD2P09758 323 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 PPP3CBP16298 524 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 APLNRP35414 380 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 CCR9P51686 369 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 GBX2P52951 348 aaPredicted RBP4.05□□□□□ -1.76
SF3B1-208ENST00000470268 UCP2P55851 309 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 TPTEP56180 551 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 BDH1Q02338 343 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 ZNF92Q03936 586 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 BSPH1Q075Z2 132 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 SLC3A1Q07837 685 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 MOGQ16653 247 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 TBC1D28Q2M2D7 210 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 CCDC58Q4VC31 144 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 RPL22L1Q6P5R6 122 aaKnown RBP4.05□□□□□ -1.76
SF3B1-208ENST00000470268 ARL9Q6T311 187 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 ELMOD2Q8IZ81 293 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 MCFD2Q8NI22 146 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 OR51E1Q8TCB6 317 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 SPTSSAQ969W0 71 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 SGK3Q96BR1 496 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 SMIM19Q96E16 107 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 DACH2Q96NX9 599 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 ISYNA1Q9NPH2 558 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 FAIMQ9NVQ4 179 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 TXNL4BQ9NX01 149 aaKnown RBP4.05□□□□□ -1.76
SF3B1-208ENST00000470268 NDRG3Q9UGV2 375 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 GTF2A1LQ9UNN4 478 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 STARD10Q9Y365 291 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 CACNA1CQ13936 2221 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 FLNCQ14315 2725 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 DIDO1Q9BTC0 2240 aaKnown RBP4.04□□□□□ -1.76
SF3B1-208ENST00000470268 USP9XQ93008 2570 aaPredicted RBP4.04□□□□□ -1.76
SF3B1-208ENST00000470268 A0A0B4J203 849 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 A6NIN4 97 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 P2RY10O00398 339 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 ABCD4O14678 606 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 SC5DO75845 299 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 CDRT1O95170 752 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 PTAFRP25105 342 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 ACKR3P25106 362 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 SDC2P34741 201 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 GK2Q14410 553 aaPredicted RBP4.04□□□□□ -1.76
SF3B1-208ENST00000470268 HLXQ14774 488 aaPredicted RBP4.04□□□□□ -1.76
SF3B1-208ENST00000470268 DGUOKQ16854 277 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 ZNF829Q3KNS6 432 aaPredicted RBP4.04□□□□□ -1.76
SF3B1-208ENST00000470268 ZNF404Q494X3 552 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 GLYATL3Q5SZD4 288 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 SPATA46Q5T0L3 261 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 NCMAPQ5T1S8 102 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 ASPHD2Q6ICH7 369 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 ADAM5Q6NVV9 412 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 FIP1L1Q6UN15 594 aaKnown RBP4.04□□□□□ -1.76
SF3B1-208ENST00000470268 TMEM91Q6ZNR0 172 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 USP43Q70EL4 1123 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 NR2C2APQ86WQ0 139 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 OR8H2Q8N162 312 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 LILRB1Q8NHL6 650 aaPredicted RBP4.04□□□□□ -1.76
SF3B1-208ENST00000470268 NEUROG1Q92886 237 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 SPSB4Q96A44 273 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 MRPL48Q96GC5 212 aaKnown RBP4.04□□□□□ -1.76
SF3B1-208ENST00000470268 PGAM5Q96HS1 289 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 OR2J1Q9GZK6 312 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 PPP1R3EQ9H7J1 279 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 PLGRKTQ9HBL7 147 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 ITGB1BP2Q9UKP3 347 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 SLC45A2Q9UMX9 530 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 STUB1Q9UNE7 303 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 RTTNQ86VV8 2226 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 A0A0U1RQV5 110 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 LINC00854A0A1B0GVQ3 168 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 LOC107986453A0A1B0GWG9 222 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 ANKRD61A6NGH8 418 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 TMEM212A6NML5 194 aa4.04□□□□□ -1.76
SF3B1-208ENST00000470268 SHISA9B4DS77 424 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms