RNA–Protein interactions for RNA: ENST00000470086.5

LSM2-210, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-210ENST00000470086 KCNMB1Q16558 191 aa6.4□□□□□ -1.38
LSM2-210ENST00000470086 RFX4Q33E94 735 aa6.4□□□□□ -1.38
LSM2-210ENST00000470086 UTF1Q5T230 341 aa6.4□□□□□ -1.38
LSM2-210ENST00000470086 C9orf66Q5T8R8 295 aa6.4□□□□□ -1.38
LSM2-210ENST00000470086 TMEM200BQ69YZ2 307 aa6.4□□□□□ -1.38
LSM2-210ENST00000470086 DPY19L4Q7Z388 723 aa6.4□□□□□ -1.38
LSM2-210ENST00000470086 CD177Q8N6Q3 437 aa6.4□□□□□ -1.38
LSM2-210ENST00000470086 OR51D1Q8NGF3 324 aa6.4□□□□□ -1.38
LSM2-210ENST00000470086 C12orf43Q96C57 262 aaKnown RBP6.4□□□□□ -1.38
LSM2-210ENST00000470086 BPIFA2Q96DR5 249 aa6.4□□□□□ -1.38
LSM2-210ENST00000470086 ZNF799Q96GE5 643 aa6.4□□□□□ -1.38
LSM2-210ENST00000470086 ZNF570Q96NI8 536 aa6.4□□□□□ -1.38
LSM2-210ENST00000470086 ZBTB18Q99592 522 aa6.4□□□□□ -1.38
LSM2-210ENST00000470086 ATF6BQ99941 703 aa6.4□□□□□ -1.38
LSM2-210ENST00000470086 FAM110AQ9BQ89 295 aa6.4□□□□□ -1.38
LSM2-210ENST00000470086 SLC25A33Q9BSK2 321 aa6.4□□□□□ -1.38
LSM2-210ENST00000470086 ZMAT4Q9H898 229 aa6.4□□□□□ -1.38
LSM2-210ENST00000470086 ABCB10Q9NRK6 738 aa6.4□□□□□ -1.38
LSM2-210ENST00000470086 AURKCQ9UQB9 309 aa6.4□□□□□ -1.38
LSM2-210ENST00000470086 POLR1DQ9Y2S0 133 aa6.4□□□□□ -1.38
LSM2-210ENST00000470086 GGT3PA6NGU5 568 aa6.39□□□□□ -1.39
LSM2-210ENST00000470086 A6NIZ1 184 aa6.39□□□□□ -1.39
LSM2-210ENST00000470086 J3KTA2 159 aa6.39□□□□□ -1.39
LSM2-210ENST00000470086 CCL24O00175 119 aa6.39□□□□□ -1.39
LSM2-210ENST00000470086 SOCS2O14508 198 aa6.39□□□□□ -1.39
LSM2-210ENST00000470086 INMTO95050 263 aa6.39□□□□□ -1.39
LSM2-210ENST00000470086 KITP10721 976 aa6.39□□□□□ -1.39
LSM2-210ENST00000470086 PSG2P11465 335 aa6.39□□□□□ -1.39
LSM2-210ENST00000470086 PIPP12273 146 aaPredicted RBP6.39□□□□□ -1.39
LSM2-210ENST00000470086 SPNP16150 400 aa6.39□□□□□ -1.39
LSM2-210ENST00000470086 GPX2P18283 190 aa6.39□□□□□ -1.39
LSM2-210ENST00000470086 RHCEP18577 417 aa6.39□□□□□ -1.39
LSM2-210ENST00000470086 POU1F1P28069 291 aa6.39□□□□□ -1.39
LSM2-210ENST00000470086 OTX1P32242 354 aaPredicted RBP6.39□□□□□ -1.39
LSM2-210ENST00000470086 GGT2P36268 569 aa6.39□□□□□ -1.39
LSM2-210ENST00000470086 CDKN2AP42771 156 aaKnown RBP6.39□□□□□ -1.39
LSM2-210ENST00000470086 OR3A4PP47883 348 aa6.39□□□□□ -1.39
LSM2-210ENST00000470086 SLC25A1P53007 311 aa6.39□□□□□ -1.39
LSM2-210ENST00000470086 SLC18A1P54219 525 aa6.39□□□□□ -1.39
LSM2-210ENST00000470086 MTPNP58546 118 aa6.39□□□□□ -1.39
LSM2-210ENST00000470086 RAP1BP61224 184 aa6.39□□□□□ -1.39
LSM2-210ENST00000470086 RAP1AP62834 184 aa6.39□□□□□ -1.39
LSM2-210ENST00000470086 SLC34A1Q06495 639 aa6.39□□□□□ -1.39
LSM2-210ENST00000470086 CKAP4Q07065 602 aaKnown RBP6.39□□□□□ -1.39
LSM2-210ENST00000470086 ZNF260Q3ZCT1 412 aa6.39□□□□□ -1.39
LSM2-210ENST00000470086 C9orf152Q5JTZ5 239 aa6.39□□□□□ -1.39
LSM2-210ENST00000470086 FAM53AQ6NSI3 398 aaPredicted RBP6.39□□□□□ -1.39
LSM2-210ENST00000470086 HAPLN4Q86UW8 402 aa6.39□□□□□ -1.39
LSM2-210ENST00000470086 NRMQ8IXM6 262 aa6.39□□□□□ -1.39
LSM2-210ENST00000470086 OR6V1Q8N148 313 aa6.39□□□□□ -1.39
LSM2-210ENST00000470086 BATF2Q8N1L9 274 aa6.39□□□□□ -1.39
LSM2-210ENST00000470086 SLC26A10Q8NG04 563 aa6.39□□□□□ -1.39
LSM2-210ENST00000470086 ZNRF4Q8WWF5 429 aa6.39□□□□□ -1.39
LSM2-210ENST00000470086 NABP2Q9BQ15 211 aa6.39□□□□□ -1.39
LSM2-210ENST00000470086 WACQ9BTA9 647 aa6.39□□□□□ -1.39
LSM2-210ENST00000470086 SP140LQ9H930 580 aa6.39□□□□□ -1.39
LSM2-210ENST00000470086 TBC1D23Q9NUY8 699 aa6.39□□□□□ -1.39
LSM2-210ENST00000470086 MRPL22Q9NWU5 206 aaKnown RBP6.39□□□□□ -1.39
LSM2-210ENST00000470086 VNN3Q9NY84 501 aa6.39□□□□□ -1.39
LSM2-210ENST00000470086 RIMS3Q9UJD0 308 aa6.39□□□□□ -1.39
LSM2-210ENST00000470086 PITPNC1Q9UKF7 332 aa6.39□□□□□ -1.39
LSM2-210ENST00000470086 TBL2Q9Y4P3 447 aaKnown RBP6.39□□□□□ -1.39
LSM2-210ENST00000470086 GMEB1Q9Y692 573 aa6.39□□□□□ -1.39
LSM2-210ENST00000470086 APOBP04114 4563 aaKnown RBP6.38□□□□□ -1.39
LSM2-210ENST00000470086 hCG_38984A0A1B0GV85 526 aa6.38□□□□□ -1.39
LSM2-210ENST00000470086 LINC01548A6NM66 108 aa6.38□□□□□ -1.39
LSM2-210ENST00000470086 OR2AT4A6NND4 320 aa6.38□□□□□ -1.39
LSM2-210ENST00000470086 KHDRBS3O75525 346 aaKnown RBP6.38□□□□□ -1.39
LSM2-210ENST00000470086 MMP23AO75900 390 aa6.38□□□□□ -1.39
LSM2-210ENST00000470086 ALDOBP05062 364 aa6.38□□□□□ -1.39
LSM2-210ENST00000470086 IGHV1-8P0DP01 117 aa6.38□□□□□ -1.39
LSM2-210ENST00000470086 IDO1P14902 403 aa6.38□□□□□ -1.39
LSM2-210ENST00000470086 GABRA2P47869 451 aa6.38□□□□□ -1.39
LSM2-210ENST00000470086 LGALS4P56470 323 aa6.38□□□□□ -1.39
LSM2-210ENST00000470086 TAS2R41P59536 307 aa6.38□□□□□ -1.39
LSM2-210ENST00000470086 FHL3Q13643 280 aa6.38□□□□□ -1.39
LSM2-210ENST00000470086 BLMHQ13867 455 aa6.38□□□□□ -1.39
LSM2-210ENST00000470086 NFYCQ13952 458 aa6.38□□□□□ -1.39
LSM2-210ENST00000470086 SRSF7Q16629 238 aaKnown RBP eCLIP6.38□□□□□ -1.39
LSM2-210ENST00000470086 TBPL2Q6SJ96 375 aa6.38□□□□□ -1.39
LSM2-210ENST00000470086 DLEU7Q6UYE1 221 aa6.38□□□□□ -1.39
LSM2-210ENST00000470086 ZNF695Q8IW36 515 aa6.38□□□□□ -1.39
LSM2-210ENST00000470086 GJC3Q8NFK1 279 aa6.38□□□□□ -1.39
LSM2-210ENST00000470086 OR4P4Q8NGL7 312 aa6.38□□□□□ -1.39
LSM2-210ENST00000470086 OR4Q3Q8NH05 313 aa6.38□□□□□ -1.39
LSM2-210ENST00000470086 FNDC8Q8TC99 324 aa6.38□□□□□ -1.39
LSM2-210ENST00000470086 FOXRED1Q96CU9 486 aaPredicted RBP6.38□□□□□ -1.39
LSM2-210ENST00000470086 ZNF488Q96MN9 340 aa6.38□□□□□ -1.39
LSM2-210ENST00000470086 DNTTIP1Q9H147 329 aa6.38□□□□□ -1.39
LSM2-210ENST00000470086 YY1AP1Q9H869 796 aa6.38□□□□□ -1.39
LSM2-210ENST00000470086 ZNF319Q9P2F9 582 aa6.38□□□□□ -1.39
LSM2-210ENST00000470086 RHCGQ9UBD6 479 aa6.38□□□□□ -1.39
LSM2-210ENST00000470086 NLKQ9UBE8 527 aa6.38□□□□□ -1.39
LSM2-210ENST00000470086 LGALS13Q9UHV8 139 aa6.38□□□□□ -1.39
LSM2-210ENST00000470086 A4GNTQ9UNA3 340 aa6.38□□□□□ -1.39
LSM2-210ENST00000470086 RABL2BQ9UNT1 228 aa6.38□□□□□ -1.39
LSM2-210ENST00000470086 MED31Q9Y3C7 131 aa6.38□□□□□ -1.39
LSM2-210ENST00000470086 RHBDD3Q9Y3P4 386 aa6.38□□□□□ -1.39
LSM2-210ENST00000470086 SNX13Q9Y5W8 968 aa6.38□□□□□ -1.39
LSM2-210ENST00000470086 C17orf98A8MV24 154 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms