RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 DCTDP32321 178 aa14.35□□□□□ -0.11
COL7A1-208ENST00000470076 PROK1P58294 105 aa14.35□□□□□ -0.11
COL7A1-208ENST00000470076 KRTAP10-3P60369 221 aa14.35□□□□□ -0.11
COL7A1-208ENST00000470076 TAF9Q16594 264 aa14.35□□□□□ -0.11
COL7A1-208ENST00000470076 CPOQ8IVL8 374 aa14.35□□□□□ -0.11
COL7A1-208ENST00000470076 OR8B12Q8NGG6 310 aa14.35□□□□□ -0.11
COL7A1-208ENST00000470076 ANGPTL6Q8NI99 470 aa14.35□□□□□ -0.11
COL7A1-208ENST00000470076 HPSE2Q8WWQ2 592 aa14.35□□□□□ -0.11
COL7A1-208ENST00000470076 LYZL4Q96KX0 146 aa14.35□□□□□ -0.11
COL7A1-208ENST00000470076 GAFA1Q96PS6 74 aa14.35□□□□□ -0.11
COL7A1-208ENST00000470076 SEMA6AQ9H2E6 1030 aa14.35□□□□□ -0.11
COL7A1-208ENST00000470076 ZNF556Q9HAH1 456 aa14.35□□□□□ -0.11
COL7A1-208ENST00000470076 SLC25A10Q9UBX3 287 aaPredicted RBP14.35□□□□□ -0.11
COL7A1-208ENST00000470076 VPREB3Q9UKI3 123 aa14.35□□□□□ -0.11
COL7A1-208ENST00000470076 AQP12BA6NM10 295 aa14.34□□□□□ -0.11
COL7A1-208ENST00000470076 M0R1W7 72 aa14.34□□□□□ -0.11
COL7A1-208ENST00000470076 SIGLEC5O15389 551 aa14.34□□□□□ -0.11
COL7A1-208ENST00000470076 ACAA1P09110 424 aaPredicted RBP14.34□□□□□ -0.11
COL7A1-208ENST00000470076 T-ENOLP0DO92 83 aa14.34□□□□□ -0.11
COL7A1-208ENST00000470076 ALOX5APP20292 161 aa14.34□□□□□ -0.11
COL7A1-208ENST00000470076 MAP2K3P46734 347 aa14.34□□□□□ -0.11
COL7A1-208ENST00000470076 CAV3P56539 151 aa14.34□□□□□ -0.11
COL7A1-208ENST00000470076 CDK5Q00535 292 aa14.34□□□□□ -0.11
COL7A1-208ENST00000470076 DGUOKQ16854 277 aa14.34□□□□□ -0.11
COL7A1-208ENST00000470076 NCR3LG1Q68D85 454 aa14.34□□□□□ -0.11
COL7A1-208ENST00000470076 DHRS7BQ6IAN0 325 aaPredicted RBP14.34□□□□□ -0.11
COL7A1-208ENST00000470076 Q6ZSV7 163 aa14.34□□□□□ -0.11
COL7A1-208ENST00000470076 KRT74Q7RTS7 529 aa14.34□□□□□ -0.11
COL7A1-208ENST00000470076 KRT77Q7Z794 578 aa14.34□□□□□ -0.11
COL7A1-208ENST00000470076 TMEM179BQ7Z7N9 219 aa14.34□□□□□ -0.11
COL7A1-208ENST00000470076 AQP12AQ8IXF9 295 aa14.34□□□□□ -0.11
COL7A1-208ENST00000470076 FAM81AQ8TBF8 368 aa14.34□□□□□ -0.11
COL7A1-208ENST00000470076 TNFRSF14Q92956 283 aa14.34□□□□□ -0.11
COL7A1-208ENST00000470076 TEX12Q9BXU0 123 aa14.34□□□□□ -0.11
COL7A1-208ENST00000470076 FGF23Q9GZV9 251 aaPredicted RBP14.34□□□□□ -0.11
COL7A1-208ENST00000470076 C1orf21Q9H246 121 aa14.34□□□□□ -0.11
COL7A1-208ENST00000470076 C16orf95Q9H693 158 aa14.34□□□□□ -0.11
COL7A1-208ENST00000470076 METTL8Q9H825 291 aaKnown RBP14.34□□□□□ -0.11
COL7A1-208ENST00000470076 NLKQ9UBE8 527 aa14.34□□□□□ -0.11
COL7A1-208ENST00000470076 LAMP5Q9UJQ1 280 aa14.34□□□□□ -0.11
COL7A1-208ENST00000470076 KLHDC2Q9Y2U9 406 aa14.34□□□□□ -0.11
COL7A1-208ENST00000470076 LRP12Q9Y561 859 aa14.34□□□□□ -0.11
COL7A1-208ENST00000470076 A0A0U1RQV5 110 aa14.33□□□□□ -0.12
COL7A1-208ENST00000470076 ZNF816-ZNF321PA0A0X1KG74 233 aa14.33□□□□□ -0.12
COL7A1-208ENST00000470076 ACOD1A6NK06 481 aa14.33□□□□□ -0.12
COL7A1-208ENST00000470076 OR2AT4A6NND4 320 aa14.33□□□□□ -0.12
COL7A1-208ENST00000470076 E2F6O75461 281 aa14.33□□□□□ -0.12
COL7A1-208ENST00000470076 PAHP00439 452 aa14.33□□□□□ -0.12
COL7A1-208ENST00000470076 NDUFB7P17568 137 aa14.33□□□□□ -0.12
COL7A1-208ENST00000470076 GLRA1P23415 457 aa14.33□□□□□ -0.12
COL7A1-208ENST00000470076 TGFBR2P37173 567 aa14.33□□□□□ -0.12
COL7A1-208ENST00000470076 GPM6AP51674 278 aa14.33□□□□□ -0.12
COL7A1-208ENST00000470076 UBE2E1P51965 193 aa14.33□□□□□ -0.12
COL7A1-208ENST00000470076 RPS7P62081 194 aaKnown RBP14.33□□□□□ -0.12
COL7A1-208ENST00000470076 GNG3P63215 75 aa14.33□□□□□ -0.12
COL7A1-208ENST00000470076 ACSM1Q08AH1 577 aa14.33□□□□□ -0.12
COL7A1-208ENST00000470076 BLMHQ13867 455 aa14.33□□□□□ -0.12
COL7A1-208ENST00000470076 ASPHD2Q6ICH7 369 aa14.33□□□□□ -0.12
COL7A1-208ENST00000470076 KCTD18Q6PI47 426 aaPredicted RBP14.33□□□□□ -0.12
COL7A1-208ENST00000470076 DEGS2Q6QHC5 323 aa14.33□□□□□ -0.12
COL7A1-208ENST00000470076 OR5R1Q8NH85 324 aa14.33□□□□□ -0.12
COL7A1-208ENST00000470076 CANT1Q8WVQ1 401 aa14.33□□□□□ -0.12
COL7A1-208ENST00000470076 CLPTM1LQ96KA5 538 aa14.33□□□□□ -0.12
COL7A1-208ENST00000470076 RBM4BQ9BQ04 359 aaKnown RBP14.33□□□□□ -0.12
COL7A1-208ENST00000470076 TAS2R1Q9NYW7 299 aa14.33□□□□□ -0.12
COL7A1-208ENST00000470076 A0A1W2PQ09 198 aa14.32□□□□□ -0.12
COL7A1-208ENST00000470076 MEIOCA2RUB1 952 aa14.32□□□□□ -0.12
COL7A1-208ENST00000470076 TSPAN9O75954 239 aa14.32□□□□□ -0.12
COL7A1-208ENST00000470076 ANXA8P13928 327 aa14.32□□□□□ -0.12
COL7A1-208ENST00000470076 ATP6V1B1P15313 513 aa14.32□□□□□ -0.12
COL7A1-208ENST00000470076 SLC2A5P22732 501 aa14.32□□□□□ -0.12
COL7A1-208ENST00000470076 SAA4P35542 130 aa14.32□□□□□ -0.12
COL7A1-208ENST00000470076 PRB3Q04118 309 aaPredicted RBP14.32□□□□□ -0.12
COL7A1-208ENST00000470076 KLRD1Q13241 179 aa14.32□□□□□ -0.12
COL7A1-208ENST00000470076 CEACAM21Q3KPI0 293 aa14.32□□□□□ -0.12
COL7A1-208ENST00000470076 CCDC197Q8NCU1 140 aa14.32□□□□□ -0.12
COL7A1-208ENST00000470076 BBS1Q8NFJ9 593 aa14.32□□□□□ -0.12
COL7A1-208ENST00000470076 ZNF671Q8TAW3 534 aa14.32□□□□□ -0.12
COL7A1-208ENST00000470076 UBE2FQ969M7 185 aa14.32□□□□□ -0.12
COL7A1-208ENST00000470076 YIPF3Q9GZM5 350 aa14.32□□□□□ -0.12
COL7A1-208ENST00000470076 OR51I2Q9H344 312 aa14.32□□□□□ -0.12
COL7A1-208ENST00000470076 TCF7L1Q9HCS4 588 aa14.32□□□□□ -0.12
COL7A1-208ENST00000470076 TRBV23-1A0A0A0MS06 115 aa14.31□□□□□ -0.12
COL7A1-208ENST00000470076 TMEM269A0A1B0GVZ9 245 aa14.31□□□□□ -0.12
COL7A1-208ENST00000470076 A0A1W2PRD5 423 aa14.31□□□□□ -0.12
COL7A1-208ENST00000470076 A0A1W2PRF3 423 aa14.31□□□□□ -0.12
COL7A1-208ENST00000470076 A0A1W2PRM7 423 aa14.31□□□□□ -0.12
COL7A1-208ENST00000470076 OR5B21A6NL26 309 aa14.31□□□□□ -0.12
COL7A1-208ENST00000470076 ZNF732B4DXR9 585 aa14.31□□□□□ -0.12
COL7A1-208ENST00000470076 RHBDL1O75783 438 aa14.31□□□□□ -0.12
COL7A1-208ENST00000470076 FAM107AO95990 144 aa14.31□□□□□ -0.12
COL7A1-208ENST00000470076 TFF1P04155 84 aa14.31□□□□□ -0.12
COL7A1-208ENST00000470076 GABRA2P47869 451 aa14.31□□□□□ -0.12
COL7A1-208ENST00000470076 DLX1P56177 255 aa14.31□□□□□ -0.12
COL7A1-208ENST00000470076 APOFQ13790 326 aa14.31□□□□□ -0.12
COL7A1-208ENST00000470076 OR5A2Q8NGI9 324 aa14.31□□□□□ -0.12
COL7A1-208ENST00000470076 DUS3LQ96G46 650 aaKnown RBP14.31□□□□□ -0.12
COL7A1-208ENST00000470076 THTPAQ9BU02 230 aa14.31□□□□□ -0.12
COL7A1-208ENST00000470076 MROQ9BYG7 248 aa14.31□□□□□ -0.12
COL7A1-208ENST00000470076 YY1AP1Q9H869 796 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms