RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 ANGPTL6Q8NI99 470 aa13.42□□□□□ -0.26
COL9A3-208ENST00000469802 SSMEM1Q8WWF3 244 aa13.42□□□□□ -0.26
COL9A3-208ENST00000469802 PIGCQ92535 297 aa13.42□□□□□ -0.26
COL9A3-208ENST00000469802 RNF170Q96K19 258 aa13.42□□□□□ -0.26
COL9A3-208ENST00000469802 GAFA1Q96PS6 74 aa13.42□□□□□ -0.26
COL9A3-208ENST00000469802 OR8B4Q96RC9 309 aa13.42□□□□□ -0.26
COL9A3-208ENST00000469802 DCTN5Q9BTE1 182 aa13.42□□□□□ -0.26
COL9A3-208ENST00000469802 MROQ9BYG7 248 aa13.42□□□□□ -0.26
COL9A3-208ENST00000469802 TVP23BQ9NYZ1 205 aa13.42□□□□□ -0.26
COL9A3-208ENST00000469802 A0A0U1RQK1 487 aa13.41□□□□□ -0.26
COL9A3-208ENST00000469802 TMEM269A0A1B0GVZ9 245 aa13.41□□□□□ -0.26
COL9A3-208ENST00000469802 PSMD9O00233 223 aa13.41□□□□□ -0.26
COL9A3-208ENST00000469802 GSC2O15499 205 aa13.41□□□□□ -0.26
COL9A3-208ENST00000469802 AKR7A2O43488 359 aa13.41□□□□□ -0.26
COL9A3-208ENST00000469802 NDUFB3O43676 98 aa13.41□□□□□ -0.26
COL9A3-208ENST00000469802 ZNF254O75437 659 aa13.41□□□□□ -0.26
COL9A3-208ENST00000469802 SRSF10O75494 262 aaKnown RBP13.41□□□□□ -0.26
COL9A3-208ENST00000469802 NDUFA7O95182 113 aa13.41□□□□□ -0.26
COL9A3-208ENST00000469802 ATP6V1B1P15313 513 aa13.41□□□□□ -0.26
COL9A3-208ENST00000469802 OMGP23515 440 aa13.41□□□□□ -0.26
COL9A3-208ENST00000469802 MAP2K3P46734 347 aa13.41□□□□□ -0.26
COL9A3-208ENST00000469802 GPM6AP51674 278 aa13.41□□□□□ -0.26
COL9A3-208ENST00000469802 RPL15P61313 204 aaKnown RBP13.41□□□□□ -0.26
COL9A3-208ENST00000469802 ESRRGP62508 458 aa13.41□□□□□ -0.26
COL9A3-208ENST00000469802 EFNB1P98172 346 aa13.41□□□□□ -0.26
COL9A3-208ENST00000469802 IKZF1Q13422 519 aa13.41□□□□□ -0.26
COL9A3-208ENST00000469802 DGUOKQ16854 277 aa13.41□□□□□ -0.26
COL9A3-208ENST00000469802 LRRC10Q5BKY1 277 aa13.41□□□□□ -0.26
COL9A3-208ENST00000469802 ZNF679Q8IYX0 411 aa13.41□□□□□ -0.26
COL9A3-208ENST00000469802 OR5T2Q8NGG2 359 aa13.41□□□□□ -0.26
COL9A3-208ENST00000469802 WFDC12Q8WWY7 111 aa13.41□□□□□ -0.26
COL9A3-208ENST00000469802 ASB17Q8WXJ9 295 aa13.41□□□□□ -0.26
COL9A3-208ENST00000469802 CNN2Q99439 309 aaKnown RBP13.41□□□□□ -0.26
COL9A3-208ENST00000469802 PBOV1Q9GZY1 135 aa13.41□□□□□ -0.26
COL9A3-208ENST00000469802 OR51I2Q9H344 312 aa13.41□□□□□ -0.26
COL9A3-208ENST00000469802 C1RLQ9NZP8 487 aa13.41□□□□□ -0.26
COL9A3-208ENST00000469802 DNAJB11Q9UBS4 358 aa13.41□□□□□ -0.26
COL9A3-208ENST00000469802 NUFIP1Q9UHK0 495 aaKnown RBP13.41□□□□□ -0.26
COL9A3-208ENST00000469802 TMEM14AQ9Y6G1 99 aa13.41□□□□□ -0.26
COL9A3-208ENST00000469802 A0A1B0GUS0 222 aa13.4□□□□□ -0.26
COL9A3-208ENST00000469802 NKX6-3A6NJ46 265 aa13.4□□□□□ -0.26
COL9A3-208ENST00000469802 SIGLEC5O15389 551 aa13.4□□□□□ -0.26
COL9A3-208ENST00000469802 RHBDL1O75783 438 aa13.4□□□□□ -0.26
COL9A3-208ENST00000469802 TFF1P04155 84 aa13.4□□□□□ -0.26
COL9A3-208ENST00000469802 RAG2P55895 527 aa13.4□□□□□ -0.26
COL9A3-208ENST00000469802 GNG3P63215 75 aa13.4□□□□□ -0.26
COL9A3-208ENST00000469802 MFGE8Q08431 387 aaPredicted RBP13.4□□□□□ -0.26
COL9A3-208ENST00000469802 BNIP1Q12981 228 aa13.4□□□□□ -0.26
COL9A3-208ENST00000469802 ATP6AP1Q15904 470 aa13.4□□□□□ -0.26
COL9A3-208ENST00000469802 CEACAM21Q3KPI0 293 aa13.4□□□□□ -0.26
COL9A3-208ENST00000469802 ZBTB37Q5TC79 503 aa13.4□□□□□ -0.26
COL9A3-208ENST00000469802 SLX4IPQ5VYV7 408 aa13.4□□□□□ -0.26
COL9A3-208ENST00000469802 KCTD8Q6ZWB6 473 aa13.4□□□□□ -0.26
COL9A3-208ENST00000469802 Q8N7P7 452 aa13.4□□□□□ -0.26
COL9A3-208ENST00000469802 OR5K1Q8NHB7 308 aa13.4□□□□□ -0.26
COL9A3-208ENST00000469802 FAM81AQ8TBF8 368 aa13.4□□□□□ -0.26
COL9A3-208ENST00000469802 PRRG3Q9BZD7 231 aa13.4□□□□□ -0.26
COL9A3-208ENST00000469802 GABARAPL1Q9H0R8 117 aa13.4□□□□□ -0.26
COL9A3-208ENST00000469802 GPR84Q9NQS5 396 aa13.4□□□□□ -0.26
COL9A3-208ENST00000469802 SNTG1Q9NSN8 517 aa13.4□□□□□ -0.26
COL9A3-208ENST00000469802 ONECUT1Q9UBC0 465 aa13.4□□□□□ -0.26
COL9A3-208ENST00000469802 NLKQ9UBE8 527 aa13.4□□□□□ -0.26
COL9A3-208ENST00000469802 ZNF222Q9UK12 451 aa13.4□□□□□ -0.26
COL9A3-208ENST00000469802 DSCAML1Q8TD84 2053 aa13.4□□□□□ -0.27
COL9A3-208ENST00000469802 CMYA5Q8N3K9 4069 aa13.39□□□□□ -0.27
COL9A3-208ENST00000469802 IGKV1D-17A0A075B6S4 117 aa13.39□□□□□ -0.27
COL9A3-208ENST00000469802 OR5B21A6NL26 309 aa13.39□□□□□ -0.27
COL9A3-208ENST00000469802 ZAR1LA6NP61 321 aa13.39□□□□□ -0.27
COL9A3-208ENST00000469802 M0R129 80 aa13.39□□□□□ -0.27
COL9A3-208ENST00000469802 MITFO75030 526 aaPredicted RBP13.39□□□□□ -0.27
COL9A3-208ENST00000469802 IGHV4-59P01825 116 aa13.39□□□□□ -0.27
COL9A3-208ENST00000469802 TTRP02766 147 aa13.39□□□□□ -0.27
COL9A3-208ENST00000469802 EPHA2P29317 976 aa13.39□□□□□ -0.27
COL9A3-208ENST00000469802 IER3P46695 156 aa13.39□□□□□ -0.27
COL9A3-208ENST00000469802 RIDAP52758 137 aaKnown RBP13.39□□□□□ -0.27
COL9A3-208ENST00000469802 CAV3P56539 151 aa13.39□□□□□ -0.27
COL9A3-208ENST00000469802 GMFBP60983 142 aa13.39□□□□□ -0.27
COL9A3-208ENST00000469802 ZNF829Q3KNS6 432 aaPredicted RBP13.39□□□□□ -0.27
COL9A3-208ENST00000469802 CEP78Q5JTW2 689 aa13.39□□□□□ -0.27
COL9A3-208ENST00000469802 AADACL4Q5VUY2 407 aa13.39□□□□□ -0.27
COL9A3-208ENST00000469802 NXNL2Q5VZ03 156 aa13.39□□□□□ -0.27
COL9A3-208ENST00000469802 C12orf73Q69YU5 71 aa13.39□□□□□ -0.27
COL9A3-208ENST00000469802 KDM4DQ6B0I6 523 aa13.39□□□□□ -0.27
COL9A3-208ENST00000469802 BCDIN3DQ7Z5W3 292 aaKnown RBP13.39□□□□□ -0.27
COL9A3-208ENST00000469802 OR4F5Q8NH21 305 aa13.39□□□□□ -0.27
COL9A3-208ENST00000469802 OR51E1Q8TCB6 317 aa13.39□□□□□ -0.27
COL9A3-208ENST00000469802 DYRK2Q92630 601 aa13.39□□□□□ -0.27
COL9A3-208ENST00000469802 TNFRSF14Q92956 283 aa13.39□□□□□ -0.27
COL9A3-208ENST00000469802 MED30Q96HR3 178 aa13.39□□□□□ -0.27
COL9A3-208ENST00000469802 TTTY10Q9BZA0 68 aa13.39□□□□□ -0.27
COL9A3-208ENST00000469802 ADGRL4Q9HBW9 690 aa13.39□□□□□ -0.27
COL9A3-208ENST00000469802 SIRT7Q9NRC8 400 aa13.39□□□□□ -0.27
COL9A3-208ENST00000469802 TNFRSF19Q9NS68 423 aa13.39□□□□□ -0.27
COL9A3-208ENST00000469802 KRT84Q9NSB2 600 aa13.39□□□□□ -0.27
COL9A3-208ENST00000469802 SLC25A10Q9UBX3 287 aaPredicted RBP13.39□□□□□ -0.27
COL9A3-208ENST00000469802 OR2AT4A6NND4 320 aa13.38□□□□□ -0.27
COL9A3-208ENST00000469802 ZNF732B4DXR9 585 aa13.38□□□□□ -0.27
COL9A3-208ENST00000469802 RNASEK-C17orf49H0YIS7 233 aa13.38□□□□□ -0.27
COL9A3-208ENST00000469802 DHRS3O75911 302 aa13.38□□□□□ -0.27
COL9A3-208ENST00000469802 ACAA1P09110 424 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms