RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 KPRPQ5T749 579 aaPredicted RBP2.17□□□□□ -2.06
VPS8-220ENST00000469713 LCE1CQ5T751 118 aa2.17□□□□□ -2.06
VPS8-220ENST00000469713 LCE1BQ5T7P3 118 aa2.17□□□□□ -2.06
VPS8-220ENST00000469713 SLC35D2Q76EJ3 337 aa2.17□□□□□ -2.06
VPS8-220ENST00000469713 APCDD1LQ8NCL9 501 aa2.17□□□□□ -2.06
VPS8-220ENST00000469713 TMEM234Q8WY98 164 aa2.17□□□□□ -2.06
VPS8-220ENST00000469713 NAPGQ99747 312 aaPredicted RBP2.17□□□□□ -2.06
VPS8-220ENST00000469713 RHOXF2Q9BQY4 288 aa2.17□□□□□ -2.06
VPS8-220ENST00000469713 DHX35Q9H5Z1 703 aaKnown RBP2.17□□□□□ -2.06
VPS8-220ENST00000469713 PPIL1Q9Y3C6 166 aa2.17□□□□□ -2.06
VPS8-220ENST00000469713 KLF12Q9Y4X4 402 aa2.17□□□□□ -2.06
VPS8-220ENST00000469713 IGHV3OR16-8A0A075B7F1 116 aa2.16□□□□□ -2.06
VPS8-220ENST00000469713 A0A1W2PPV4 95 aa2.16□□□□□ -2.06
VPS8-220ENST00000469713 A0A1W2PRF3 423 aa2.16□□□□□ -2.06
VPS8-220ENST00000469713 A0A1W2PRM7 423 aa2.16□□□□□ -2.06
VPS8-220ENST00000469713 C16orf90A8MZG2 172 aa2.16□□□□□ -2.06
VPS8-220ENST00000469713 CENPBD1B2RD01 187 aa2.16□□□□□ -2.06
VPS8-220ENST00000469713 H0YC42 278 aa2.16□□□□□ -2.06
VPS8-220ENST00000469713 MYL12BO14950 172 aa2.16□□□□□ -2.06
VPS8-220ENST00000469713 MBP02144 154 aa2.16□□□□□ -2.06
VPS8-220ENST00000469713 IL3RAP26951 378 aa2.16□□□□□ -2.06
VPS8-220ENST00000469713 GDI2P50395 445 aaKnown RBP2.16□□□□□ -2.06
VPS8-220ENST00000469713 PPP1CAP62136 330 aa2.16□□□□□ -2.06
VPS8-220ENST00000469713 MED27Q6P2C8 311 aa2.16□□□□□ -2.06
VPS8-220ENST00000469713 PRSS54Q6PEW0 395 aa2.16□□□□□ -2.06
VPS8-220ENST00000469713 ASCL4Q6XD76 172 aa2.16□□□□□ -2.06
VPS8-220ENST00000469713 SLC25A29Q8N8R3 303 aa2.16□□□□□ -2.06
VPS8-220ENST00000469713 OR51L1Q8NGJ5 315 aa2.16□□□□□ -2.06
VPS8-220ENST00000469713 OR1S1Q8NH92 325 aa2.16□□□□□ -2.06
VPS8-220ENST00000469713 ING5Q8WYH8 240 aa2.16□□□□□ -2.06
VPS8-220ENST00000469713 SMARCD1Q96GM5 515 aa2.16□□□□□ -2.06
VPS8-220ENST00000469713 Q96MT0 163 aa2.16□□□□□ -2.06
VPS8-220ENST00000469713 CHID1Q9BWS9 393 aa2.16□□□□□ -2.06
VPS8-220ENST00000469713 KIR3DX1Q9H7L2 352 aa2.16□□□□□ -2.06
VPS8-220ENST00000469713 LINC00574Q9H8X3 128 aa2.16□□□□□ -2.06
VPS8-220ENST00000469713 DHCR7Q9UBM7 475 aaKnown RBP2.16□□□□□ -2.06
VPS8-220ENST00000469713 SCN4AP35499 1836 aa2.15□□□□□ -2.06
VPS8-220ENST00000469713 SBNO1A3KN83 1393 aa2.15□□□□□ -2.07
VPS8-220ENST00000469713 IGHV6-1A0A0B4J1U7 121 aa2.15□□□□□ -2.07
VPS8-220ENST00000469713 ISPDA4D126 451 aa2.15□□□□□ -2.07
VPS8-220ENST00000469713 SCO1O75880 301 aa2.15□□□□□ -2.07
VPS8-220ENST00000469713 ETHE1O95571 254 aa2.15□□□□□ -2.07
VPS8-220ENST00000469713 SLC35G6P0C7Q6 338 aa2.15□□□□□ -2.07
VPS8-220ENST00000469713 NELFEP18615 380 aaKnown RBP2.15□□□□□ -2.07
VPS8-220ENST00000469713 IVDP26440 423 aa2.15□□□□□ -2.07
VPS8-220ENST00000469713 TGFBR1P36897 503 aa2.15□□□□□ -2.07
VPS8-220ENST00000469713 HCCSP53701 268 aa2.15□□□□□ -2.07
VPS8-220ENST00000469713 MTPNP58546 118 aa2.15□□□□□ -2.07
VPS8-220ENST00000469713 RBX1P62877 108 aa2.15□□□□□ -2.07
VPS8-220ENST00000469713 CPTPQ5TA50 214 aa2.15□□□□□ -2.07
VPS8-220ENST00000469713 SLC7A5P1Q8MH63 180 aa2.15□□□□□ -2.07
VPS8-220ENST00000469713 ORMDL3Q8N138 153 aa2.15□□□□□ -2.07
VPS8-220ENST00000469713 ZCCHC24Q8N2G6 241 aaKnown RBP2.15□□□□□ -2.07
VPS8-220ENST00000469713 CYB561A3Q8NBI2 242 aa2.15□□□□□ -2.07
VPS8-220ENST00000469713 OR4A15Q8NGL6 344 aa2.15□□□□□ -2.07
VPS8-220ENST00000469713 OR5M1Q8NGP8 315 aa2.15□□□□□ -2.07
VPS8-220ENST00000469713 OR10Z1Q8NGY1 313 aa2.15□□□□□ -2.07
VPS8-220ENST00000469713 SFXN5Q8TD22 340 aa2.15□□□□□ -2.07
VPS8-220ENST00000469713 KLF14Q8TD94 323 aaPredicted RBP2.15□□□□□ -2.07
VPS8-220ENST00000469713 SNF8Q96H20 258 aa2.15□□□□□ -2.07
VPS8-220ENST00000469713 CHRNA10Q9GZZ6 450 aa2.15□□□□□ -2.07
VPS8-220ENST00000469713 TDRD3Q9H7E2 651 aaKnown RBP2.15□□□□□ -2.07
VPS8-220ENST00000469713 CA10Q9NS85 328 aa2.15□□□□□ -2.07
VPS8-220ENST00000469713 IFNKQ9P0W0 207 aa2.15□□□□□ -2.07
VPS8-220ENST00000469713 KIF27Q86VH2 1401 aa2.15□□□□□ -2.07
VPS8-220ENST00000469713 BAZ2AQ9UIF9 1905 aaKnown RBP2.15□□□□□ -2.07
VPS8-220ENST00000469713 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.14□□□□□ -2.07
VPS8-220ENST00000469713 LOC102724200A0A096LPH7 203 aaPredicted RBP2.14□□□□□ -2.07
VPS8-220ENST00000469713 TRAV8-4A0A0B4J246 113 aa2.14□□□□□ -2.07
VPS8-220ENST00000469713 TRAV8-6A0A0B4J262 113 aa2.14□□□□□ -2.07
VPS8-220ENST00000469713 IGHV2OR16-5A0A0B4J2B6 119 aa2.14□□□□□ -2.07
VPS8-220ENST00000469713 IGKV1-6A0A0C4DH72 117 aa2.14□□□□□ -2.07
VPS8-220ENST00000469713 OR7C2O60412 319 aa2.14□□□□□ -2.07
VPS8-220ENST00000469713 CNMDO75829 334 aa2.14□□□□□ -2.07
VPS8-220ENST00000469713 PLEKHA8P1O95397 391 aa2.14□□□□□ -2.07
VPS8-220ENST00000469713 SNAI1O95863 264 aaPredicted RBP2.14□□□□□ -2.07
VPS8-220ENST00000469713 IGKV1-39P01597 117 aa2.14□□□□□ -2.07
VPS8-220ENST00000469713 P01737 135 aa2.14□□□□□ -2.07
VPS8-220ENST00000469713 IGKV1D-39P04432 117 aa2.14□□□□□ -2.07
VPS8-220ENST00000469713 CRYGCP07315 174 aa2.14□□□□□ -2.07
VPS8-220ENST00000469713 MMP7P09237 267 aaPredicted RBP2.14□□□□□ -2.07
VPS8-220ENST00000469713 RNASE2P10153 161 aaKnown RBP2.14□□□□□ -2.07
VPS8-220ENST00000469713 CPN2P22792 545 aa2.14□□□□□ -2.07
VPS8-220ENST00000469713 PRSS3P35030 304 aa2.14□□□□□ -2.07
VPS8-220ENST00000469713 ERFP50548 548 aa2.14□□□□□ -2.07
VPS8-220ENST00000469713 SLC35B1P78383 322 aa2.14□□□□□ -2.07
VPS8-220ENST00000469713 ST3GAL4Q11206 333 aa2.14□□□□□ -2.07
VPS8-220ENST00000469713 MAD2L1BPQ15013 274 aaPredicted RBP2.14□□□□□ -2.07
VPS8-220ENST00000469713 SP6Q3SY56 376 aa2.14□□□□□ -2.07
VPS8-220ENST00000469713 HHATQ5VTY9 493 aa2.14□□□□□ -2.07
VPS8-220ENST00000469713 SPINT4Q6UDR6 99 aa2.14□□□□□ -2.07
VPS8-220ENST00000469713 CASP12Q6UXS9 341 aa2.14□□□□□ -2.07
VPS8-220ENST00000469713 C16orf47Q6ZP98 133 aaPredicted RBP2.14□□□□□ -2.07
VPS8-220ENST00000469713 BBS7Q8IWZ6 715 aa2.14□□□□□ -2.07
VPS8-220ENST00000469713 ARHGAP18Q8N392 663 aa2.14□□□□□ -2.07
VPS8-220ENST00000469713 OR6K6Q8NGW6 343 aa2.14□□□□□ -2.07
VPS8-220ENST00000469713 FRMD8P1Q9BZ68 369 aaPredicted RBP2.14□□□□□ -2.07
VPS8-220ENST00000469713 STMN4Q9H169 189 aaPredicted RBP2.14□□□□□ -2.07
VPS8-220ENST00000469713 FANCEQ9HB96 536 aa2.14□□□□□ -2.07
VPS8-220ENST00000469713 TICRRQ7Z2Z1 1910 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms