RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 ZNF718Q3SXZ3 478 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 DNAL1Q4LDG9 190 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 BEND6Q5SZJ8 279 aaPredicted RBP4.46□□□□□ -1.7
PTCD3-207ENST00000467273 SERTAD4-AS1Q5TG53 156 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 TYW3Q6IPR3 259 aaKnown RBP4.46□□□□□ -1.7
PTCD3-207ENST00000467273 ZNF782Q6ZMW2 699 aaPredicted RBP4.46□□□□□ -1.7
PTCD3-207ENST00000467273 TMEM182Q6ZP80 229 aaPredicted RBP4.46□□□□□ -1.7
PTCD3-207ENST00000467273 CFAP77Q6ZQR2 320 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 ZNF584Q8IVC4 421 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 C20orf196Q8IYI0 205 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 RNF148Q8N7C7 305 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 C11orf65Q8NCR3 313 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 OR4F17Q8NGA8 305 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 OR5D16Q8NGK9 328 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 PNPT1Q8TCS8 783 aaKnown RBP4.46□□□□□ -1.7
PTCD3-207ENST00000467273 ST6GALNAC6Q969X2 333 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 COQ8BQ96D53 544 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 TSSK3Q96PN8 268 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 TSPAN32Q96QS1 320 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 OR4F4Q96R69 305 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 PANX1Q96RD7 426 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 KCNA7Q96RP8 456 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 CIB1Q99828 191 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 ALKBH7Q9BT30 221 aaPredicted RBP4.46□□□□□ -1.7
PTCD3-207ENST00000467273 MFFQ9GZY8 342 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 SRD5A3Q9H8P0 318 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 MED20Q9H944 212 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 CDH20Q9HBT6 801 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 TNFRSF19Q9NS68 423 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 B3GAT1Q9P2W7 334 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 VPREB3Q9UKI3 123 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 SNX24Q9Y343 169 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 IFT52Q9Y366 437 aa4.46□□□□□ -1.7
PTCD3-207ENST00000467273 PUS1Q9Y606 427 aaKnown RBP eCLIP4.46□□□□□ -1.7
PTCD3-207ENST00000467273 SOX21Q9Y651 276 aaPredicted RBP4.46□□□□□ -1.7
PTCD3-207ENST00000467273 TRAV25A0A0B4J276 109 aa4.45□□□□□ -1.7
PTCD3-207ENST00000467273 LCE6AA0A183 80 aa4.45□□□□□ -1.7
PTCD3-207ENST00000467273 IQCMA0A1B0GVH7 501 aa4.45□□□□□ -1.7
PTCD3-207ENST00000467273 DPPA5A6NC42 116 aa4.45□□□□□ -1.7
PTCD3-207ENST00000467273 E9PQ18 207 aa4.45□□□□□ -1.7
PTCD3-207ENST00000467273 M0R3G1 203 aa4.45□□□□□ -1.7
PTCD3-207ENST00000467273 RHODO00212 210 aa4.45□□□□□ -1.7
PTCD3-207ENST00000467273 SPRY3O43610 288 aa4.45□□□□□ -1.7
PTCD3-207ENST00000467273 ENSAO43768 121 aaKnown RBP4.45□□□□□ -1.7
PTCD3-207ENST00000467273 PROP1O75360 226 aa4.45□□□□□ -1.7
PTCD3-207ENST00000467273 BCAS1O75363 584 aaPredicted RBP4.45□□□□□ -1.7
PTCD3-207ENST00000467273 DFFBO76075 338 aa4.45□□□□□ -1.7
PTCD3-207ENST00000467273 FARS2O95363 451 aaKnown RBP4.45□□□□□ -1.7
PTCD3-207ENST00000467273 DUS4LO95620 317 aaKnown RBP4.45□□□□□ -1.7
PTCD3-207ENST00000467273 IGHV4-59P01825 116 aa4.45□□□□□ -1.7
PTCD3-207ENST00000467273 MBP02144 154 aa4.45□□□□□ -1.7
PTCD3-207ENST00000467273 IL6P05231 212 aa4.45□□□□□ -1.7
PTCD3-207ENST00000467273 GSTA1P08263 222 aa4.45□□□□□ -1.7
PTCD3-207ENST00000467273 B4GALT1P15291 398 aa4.45□□□□□ -1.7
PTCD3-207ENST00000467273 CTRB1P17538 263 aa4.45□□□□□ -1.7
PTCD3-207ENST00000467273 PRPS1L1P21108 318 aa4.45□□□□□ -1.7
PTCD3-207ENST00000467273 ARRB2P32121 409 aa4.45□□□□□ -1.7
PTCD3-207ENST00000467273 RANBP1P43487 201 aa4.45□□□□□ -1.7
PTCD3-207ENST00000467273 KIR2DS4P43632 304 aa4.45□□□□□ -1.7
PTCD3-207ENST00000467273 RPS5P46782 204 aaKnown RBP4.45□□□□□ -1.7
PTCD3-207ENST00000467273 BCAP31P51572 246 aa4.45□□□□□ -1.7
PTCD3-207ENST00000467273 EFNB2P52799 333 aa4.45□□□□□ -1.7
PTCD3-207ENST00000467273 FOXA1P55317 472 aa4.45□□□□□ -1.7
PTCD3-207ENST00000467273 COPZ1P61923 177 aa4.45□□□□□ -1.7
PTCD3-207ENST00000467273 HPCAP84074 193 aa4.45□□□□□ -1.7
PTCD3-207ENST00000467273 TNFAIP6P98066 277 aaPredicted RBP4.45□□□□□ -1.7
PTCD3-207ENST00000467273 ACSM1Q08AH1 577 aa4.45□□□□□ -1.7
PTCD3-207ENST00000467273 UAP1Q16222 522 aaPredicted RBP4.45□□□□□ -1.7
PTCD3-207ENST00000467273 SRSF7Q16629 238 aaKnown RBP eCLIP4.45□□□□□ -1.7
PTCD3-207ENST00000467273 PCK2Q16822 640 aa4.45□□□□□ -1.7
PTCD3-207ENST00000467273 MOGAT2Q3SYC2 334 aa4.45□□□□□ -1.7
PTCD3-207ENST00000467273 RFTN2Q52LD8 501 aaPredicted RBP4.45□□□□□ -1.7
PTCD3-207ENST00000467273 DEFB121Q5J5C9 76 aa4.45□□□□□ -1.7
PTCD3-207ENST00000467273 CTRB2Q6GPI1 263 aa4.45□□□□□ -1.7
PTCD3-207ENST00000467273 ZNF771Q7L3S4 317 aaPredicted RBP4.45□□□□□ -1.7
PTCD3-207ENST00000467273 C6orf120Q7Z4R8 191 aa4.45□□□□□ -1.7
PTCD3-207ENST00000467273 NET1Q7Z628 596 aaPredicted RBP4.45□□□□□ -1.7
PTCD3-207ENST00000467273 NDUFA11Q86Y39 141 aa4.45□□□□□ -1.7
PTCD3-207ENST00000467273 CCNYL1Q8N7R7 359 aa4.45□□□□□ -1.7
PTCD3-207ENST00000467273 WFDC9Q8NEX5 89 aa4.45□□□□□ -1.7
PTCD3-207ENST00000467273 OR1J1Q8NGS3 322 aa4.45□□□□□ -1.7
PTCD3-207ENST00000467273 FANK1Q8TC84 345 aa4.45□□□□□ -1.7
PTCD3-207ENST00000467273 NPRL2Q8WTW4 380 aa4.45□□□□□ -1.7
PTCD3-207ENST00000467273 GLYATL2Q8WU03 294 aa4.45□□□□□ -1.7
PTCD3-207ENST00000467273 ROPN1LQ96C74 230 aa4.45□□□□□ -1.7
PTCD3-207ENST00000467273 BSCL2Q96G97 398 aaPredicted RBP4.45□□□□□ -1.7
PTCD3-207ENST00000467273 SLC35G5Q96KT7 338 aa4.45□□□□□ -1.7
PTCD3-207ENST00000467273 ZNF583Q96ND8 569 aa4.45□□□□□ -1.7
PTCD3-207ENST00000467273 SIGLEC11Q96RL6 698 aa4.45□□□□□ -1.7
PTCD3-207ENST00000467273 NAPGQ99747 312 aaPredicted RBP4.45□□□□□ -1.7
PTCD3-207ENST00000467273 ULBP2Q9BZM5 246 aa4.45□□□□□ -1.7
PTCD3-207ENST00000467273 NDEL1Q9GZM8 345 aa4.45□□□□□ -1.7
PTCD3-207ENST00000467273 AAMDCQ9H7C9 122 aa4.45□□□□□ -1.7
PTCD3-207ENST00000467273 CNOT2Q9NZN8 540 aaKnown RBP4.45□□□□□ -1.7
PTCD3-207ENST00000467273 PSMC3IPQ9P2W1 217 aaPredicted RBP4.45□□□□□ -1.7
PTCD3-207ENST00000467273 ENPP5Q9UJA9 477 aa4.45□□□□□ -1.7
PTCD3-207ENST00000467273 PAIP2BQ9ULR5 123 aaKnown RBP4.45□□□□□ -1.7
PTCD3-207ENST00000467273 PPP2R2CQ9Y2T4 447 aa4.45□□□□□ -1.7
PTCD3-207ENST00000467273 U3KQK5 164 aa4.45□□□□□ -1.7
PTCD3-207ENST00000467273 DNAH3Q8TD57 4116 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms