RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 EGFEM1PQ0D2K5 195 aa2.09□□□□□ -2.07
XRN1-206ENST00000467077 CDH17Q12864 832 aa2.09□□□□□ -2.07
XRN1-206ENST00000467077 NRF1Q16656 503 aa2.09□□□□□ -2.07
XRN1-206ENST00000467077 TTLL9Q3SXZ7 439 aa2.09□□□□□ -2.07
XRN1-206ENST00000467077 CTSL3PQ5NE16 218 aa2.09□□□□□ -2.07
XRN1-206ENST00000467077 AGBL2Q5U5Z8 902 aa2.09□□□□□ -2.07
XRN1-206ENST00000467077 OR2A2Q6IF42 318 aa2.09□□□□□ -2.07
XRN1-206ENST00000467077 KCNIP4Q6PIL6 250 aa2.09□□□□□ -2.07
XRN1-206ENST00000467077 SBSNQ6UWP8 590 aa2.09□□□□□ -2.07
XRN1-206ENST00000467077 ENPP6Q6UWR7 440 aa2.09□□□□□ -2.07
XRN1-206ENST00000467077 ANGPTL8Q6UXH0 198 aa2.09□□□□□ -2.07
XRN1-206ENST00000467077 LCA5Q86VQ0 697 aa2.09□□□□□ -2.07
XRN1-206ENST00000467077 TPRA1Q86W33 373 aa2.09□□□□□ -2.07
XRN1-206ENST00000467077 PPP1R27Q86WC6 154 aa2.09□□□□□ -2.07
XRN1-206ENST00000467077 CPNE9Q8IYJ1 553 aa2.09□□□□□ -2.07
XRN1-206ENST00000467077 KATNAL2Q8IYT4 538 aa2.09□□□□□ -2.07
XRN1-206ENST00000467077 SLC38A6Q8IZM9 456 aa2.09□□□□□ -2.07
XRN1-206ENST00000467077 ZNF433Q8N7K0 673 aaPredicted RBP2.09□□□□□ -2.07
XRN1-206ENST00000467077 PRELID2Q8N945 189 aa2.09□□□□□ -2.07
XRN1-206ENST00000467077 CCDC71LQ8N9Z2 235 aa2.09□□□□□ -2.07
XRN1-206ENST00000467077 STXBP6Q8NFX7 210 aa2.09□□□□□ -2.07
XRN1-206ENST00000467077 OR10A7Q8NGE5 316 aa2.09□□□□□ -2.07
XRN1-206ENST00000467077 OR1J4Q8NGS1 313 aa2.09□□□□□ -2.07
XRN1-206ENST00000467077 OR8K3Q8NH51 312 aa2.09□□□□□ -2.07
XRN1-206ENST00000467077 RAB3IL1Q8TBN0 382 aa2.09□□□□□ -2.07
XRN1-206ENST00000467077 NT5CQ8TCD5 201 aa2.09□□□□□ -2.07
XRN1-206ENST00000467077 SLC5A11Q8WWX8 675 aa2.09□□□□□ -2.07
XRN1-206ENST00000467077 SRSF12Q8WXF0 261 aaKnown RBP2.09□□□□□ -2.07
XRN1-206ENST00000467077 STARD4Q96DR4 205 aa2.09□□□□□ -2.07
XRN1-206ENST00000467077 SH3YL1Q96HL8 342 aaPredicted RBP2.09□□□□□ -2.07
XRN1-206ENST00000467077 NAP1L5Q96NT1 182 aaPredicted RBP2.09□□□□□ -2.07
XRN1-206ENST00000467077 AMDHD1Q96NU7 426 aa2.09□□□□□ -2.07
XRN1-206ENST00000467077 BIRC8Q96P09 236 aa2.09□□□□□ -2.07
XRN1-206ENST00000467077 ERP44Q9BS26 406 aa2.09□□□□□ -2.07
XRN1-206ENST00000467077 SRXN1Q9BYN0 137 aa2.09□□□□□ -2.07
XRN1-206ENST00000467077 RMND5AQ9H871 391 aa2.09□□□□□ -2.07
XRN1-206ENST00000467077 EML4Q9HC35 981 aaKnown RBP2.09□□□□□ -2.07
XRN1-206ENST00000467077 NANSQ9NR45 359 aa2.09□□□□□ -2.07
XRN1-206ENST00000467077 CHRAC1Q9NRG0 131 aa2.09□□□□□ -2.07
XRN1-206ENST00000467077 WARS2Q9UGM6 360 aaKnown RBP2.09□□□□□ -2.07
XRN1-206ENST00000467077 SNX6Q9UNH7 406 aa2.09□□□□□ -2.07
XRN1-206ENST00000467077 MRPS33Q9Y291 106 aaKnown RBP2.09□□□□□ -2.07
XRN1-206ENST00000467077 C15orf41Q9Y2V0 281 aa2.09□□□□□ -2.07
XRN1-206ENST00000467077 PLLPQ9Y342 182 aa2.09□□□□□ -2.07
XRN1-206ENST00000467077 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.09□□□□□ -2.07
XRN1-206ENST00000467077 MAD1L1Q9Y6D9 718 aa2.09□□□□□ -2.07
XRN1-206ENST00000467077 MALRD1Q5VYJ5 2156 aa2.09□□□□□ -2.08
XRN1-206ENST00000467077 TLN2Q9Y4G6 2542 aa2.09□□□□□ -2.08
XRN1-206ENST00000467077 ABCA1O95477 2261 aa2.08□□□□□ -2.08
XRN1-206ENST00000467077 IGHV7-81A0A0B4J1V7 117 aa2.08□□□□□ -2.08
XRN1-206ENST00000467077 IQANK1A0A1B0GTG1 560 aa2.08□□□□□ -2.08
XRN1-206ENST00000467077 A0A1B0GWB2 263 aa2.08□□□□□ -2.08
XRN1-206ENST00000467077 CTAGE15A4D2H0 777 aa2.08□□□□□ -2.08
XRN1-206ENST00000467077 SLC22A20A6NK97 555 aa2.08□□□□□ -2.08
XRN1-206ENST00000467077 C4orf51C9J302 202 aa2.08□□□□□ -2.08
XRN1-206ENST00000467077 K7EQM0 130 aa2.08□□□□□ -2.08
XRN1-206ENST00000467077 CDC7O00311 574 aa2.08□□□□□ -2.08
XRN1-206ENST00000467077 RS1O15537 224 aa2.08□□□□□ -2.08
XRN1-206ENST00000467077 ERI3O43414 337 aaKnown RBP2.08□□□□□ -2.08
XRN1-206ENST00000467077 UGT2B17O75795 530 aa2.08□□□□□ -2.08
XRN1-206ENST00000467077 ZNF189O75820 626 aaPredicted RBP2.08□□□□□ -2.08
XRN1-206ENST00000467077 CBR3O75828 277 aa2.08□□□□□ -2.08
XRN1-206ENST00000467077 VAPBO95292 243 aa2.08□□□□□ -2.08
XRN1-206ENST00000467077 ETHE1O95571 254 aa2.08□□□□□ -2.08
XRN1-206ENST00000467077 CD8AP01732 235 aa2.08□□□□□ -2.08
XRN1-206ENST00000467077 CRHP06850 196 aa2.08□□□□□ -2.08
XRN1-206ENST00000467077 C8GP07360 202 aa2.08□□□□□ -2.08
XRN1-206ENST00000467077 MPC1LP0DKB6 136 aa2.08□□□□□ -2.08
XRN1-206ENST00000467077 SMIM10L1P0DMW3 83 aa2.08□□□□□ -2.08
XRN1-206ENST00000467077 SLC25A16P16260 332 aa2.08□□□□□ -2.08
XRN1-206ENST00000467077 USF1P22415 310 aaPredicted RBP2.08□□□□□ -2.08
XRN1-206ENST00000467077 NTSP30990 170 aa2.08□□□□□ -2.08
XRN1-206ENST00000467077 P2RY1P47900 373 aa2.08□□□□□ -2.08
XRN1-206ENST00000467077 MARCKSL1P49006 195 aa2.08□□□□□ -2.08
XRN1-206ENST00000467077 PPT1P50897 306 aa2.08□□□□□ -2.08
XRN1-206ENST00000467077 LINC00315P59091 139 aa2.08□□□□□ -2.08
XRN1-206ENST00000467077 CBX1P83916 185 aa2.08□□□□□ -2.08
XRN1-206ENST00000467077 GGTLC2Q14390 218 aa2.08□□□□□ -2.08
XRN1-206ENST00000467077 MPPED2Q15777 294 aa2.08□□□□□ -2.08
XRN1-206ENST00000467077 PGGHGQ32M88 737 aa2.08□□□□□ -2.08
XRN1-206ENST00000467077 TP53I3Q53FA7 332 aa2.08□□□□□ -2.08
XRN1-206ENST00000467077 TIGD3Q6B0B8 471 aa2.08□□□□□ -2.08
XRN1-206ENST00000467077 TRIM40Q6P9F5 258 aa2.08□□□□□ -2.08
XRN1-206ENST00000467077 AGTRAPQ6RW13 159 aa2.08□□□□□ -2.08
XRN1-206ENST00000467077 CYHR1Q6ZMK1 362 aa2.08□□□□□ -2.08
XRN1-206ENST00000467077 MBOAT1Q6ZNC8 495 aa2.08□□□□□ -2.08
XRN1-206ENST00000467077 CTAGE6Q86UF2 777 aa2.08□□□□□ -2.08
XRN1-206ENST00000467077 MTURNQ8N3F0 131 aa2.08□□□□□ -2.08
XRN1-206ENST00000467077 SNX31Q8N9S9 440 aa2.08□□□□□ -2.08
XRN1-206ENST00000467077 ZNF540Q8NDQ6 660 aa2.08□□□□□ -2.08
XRN1-206ENST00000467077 OR8K1Q8NGG5 319 aa2.08□□□□□ -2.08
XRN1-206ENST00000467077 NUBPLQ8TB37 319 aa2.08□□□□□ -2.08
XRN1-206ENST00000467077 DOK4Q8TEW6 326 aa2.08□□□□□ -2.08
XRN1-206ENST00000467077 ANKRD49Q8WVL7 239 aa2.08□□□□□ -2.08
XRN1-206ENST00000467077 PEX13Q92968 403 aa2.08□□□□□ -2.08
XRN1-206ENST00000467077 PPWD1Q96BP3 646 aaKnown RBP2.08□□□□□ -2.08
XRN1-206ENST00000467077 MS4A6EQ96DS6 147 aa2.08□□□□□ -2.08
XRN1-206ENST00000467077 PELI1Q96FA3 418 aa2.08□□□□□ -2.08
XRN1-206ENST00000467077 SNF8Q96H20 258 aa2.08□□□□□ -2.08
XRN1-206ENST00000467077 SMIM10Q96HG1 83 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms