RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 CCL8P80075 99 aa12.87□□□□□ -0.35
NPHP4-205ENST00000466897 FABP5Q01469 135 aa12.87□□□□□ -0.35
NPHP4-205ENST00000466897 ZNF181Q2M3W8 571 aa12.87□□□□□ -0.35
NPHP4-205ENST00000466897 CEP78Q5JTW2 689 aa12.87□□□□□ -0.35
NPHP4-205ENST00000466897 ASPHD2Q6ICH7 369 aa12.87□□□□□ -0.35
NPHP4-205ENST00000466897 MOB3CQ70IA8 216 aa12.87□□□□□ -0.35
NPHP4-205ENST00000466897 OR13F1Q8NGS4 319 aa12.87□□□□□ -0.35
NPHP4-205ENST00000466897 TMEM203Q969S6 136 aa12.87□□□□□ -0.35
NPHP4-205ENST00000466897 PPP1R3EQ9H7J1 279 aa12.87□□□□□ -0.35
NPHP4-205ENST00000466897 GPR173Q9NS66 373 aa12.87□□□□□ -0.35
NPHP4-205ENST00000466897 CKLFQ9UBR5 152 aa12.87□□□□□ -0.35
NPHP4-205ENST00000466897 SCOCQ9UIL1 159 aa12.87□□□□□ -0.35
NPHP4-205ENST00000466897 STUB1Q9UNE7 303 aa12.87□□□□□ -0.35
NPHP4-205ENST00000466897 SLC7A11Q9UPY5 501 aa12.87□□□□□ -0.35
NPHP4-205ENST00000466897 NAV2Q8IVL1 2488 aa12.87□□□□□ -0.35
NPHP4-205ENST00000466897 USF3Q68DE3 2245 aa12.86□□□□□ -0.35
NPHP4-205ENST00000466897 IGKV1-9A0A0C4DH69 117 aa12.86□□□□□ -0.35
NPHP4-205ENST00000466897 LOC100289279A0A1B0GTE1 492 aa12.86□□□□□ -0.35
NPHP4-205ENST00000466897 PQLC2LA1A4F0 135 aa12.86□□□□□ -0.35
NPHP4-205ENST00000466897 LRP5LA4QPB2 252 aa12.86□□□□□ -0.35
NPHP4-205ENST00000466897 GABRPO00591 440 aa12.86□□□□□ -0.35
NPHP4-205ENST00000466897 PIN1P1O15428 100 aa12.86□□□□□ -0.35
NPHP4-205ENST00000466897 ARL6IP5O75915 188 aa12.86□□□□□ -0.35
NPHP4-205ENST00000466897 IGHV4-39P01824 125 aa12.86□□□□□ -0.35
NPHP4-205ENST00000466897 ALDOBP05062 364 aa12.86□□□□□ -0.35
NPHP4-205ENST00000466897 CD36P16671 472 aa12.86□□□□□ -0.35
NPHP4-205ENST00000466897 RAB3AP20336 220 aa12.86□□□□□ -0.35
NPHP4-205ENST00000466897 THBS2P35442 1172 aa12.86□□□□□ -0.35
NPHP4-205ENST00000466897 CRYBB2P43320 205 aa12.86□□□□□ -0.35
NPHP4-205ENST00000466897 FUT6P51993 359 aa12.86□□□□□ -0.35
NPHP4-205ENST00000466897 PPP3R1P63098 170 aa12.86□□□□□ -0.35
NPHP4-205ENST00000466897 TIMM50Q3ZCQ8 353 aa12.86□□□□□ -0.35
NPHP4-205ENST00000466897 CEACAM19Q7Z692 300 aa12.86□□□□□ -0.35
NPHP4-205ENST00000466897 Q8TCH9 128 aa12.86□□□□□ -0.35
NPHP4-205ENST00000466897 ITLN1Q8WWA0 313 aa12.86□□□□□ -0.35
NPHP4-205ENST00000466897 DVL3Q92997 716 aaPredicted RBP12.86□□□□□ -0.35
NPHP4-205ENST00000466897 YIPF6Q96EC8 236 aa12.86□□□□□ -0.35
NPHP4-205ENST00000466897 CPNE2Q96FN4 548 aaPredicted RBP12.86□□□□□ -0.35
NPHP4-205ENST00000466897 RNF170Q96K19 258 aa12.86□□□□□ -0.35
NPHP4-205ENST00000466897 FGF23Q9GZV9 251 aaPredicted RBP12.86□□□□□ -0.35
NPHP4-205ENST00000466897 NOX4Q9NPH5 578 aa12.86□□□□□ -0.35
NPHP4-205ENST00000466897 DLL4Q9NR61 685 aa12.86□□□□□ -0.35
NPHP4-205ENST00000466897 TAS2R4Q9NYW5 299 aa12.86□□□□□ -0.35
NPHP4-205ENST00000466897 ARID1AO14497 2285 aa12.85□□□□□ -0.35
NPHP4-205ENST00000466897 IGHV1-69-2A0A0G2JMI3 117 aa12.85□□□□□ -0.35
NPHP4-205ENST00000466897 ZNF732B4DXR9 585 aa12.85□□□□□ -0.35
NPHP4-205ENST00000466897 TPD52L2O43399 206 aaKnown RBP12.85□□□□□ -0.35
NPHP4-205ENST00000466897 HPXP02790 462 aa12.85□□□□□ -0.35
NPHP4-205ENST00000466897 CSF3P09919 207 aa12.85□□□□□ -0.35
NPHP4-205ENST00000466897 AZGP1P25311 298 aaKnown RBP12.85□□□□□ -0.35
NPHP4-205ENST00000466897 CFHR2P36980 270 aa12.85□□□□□ -0.35
NPHP4-205ENST00000466897 RPL5P46777 297 aaKnown RBP12.85□□□□□ -0.35
NPHP4-205ENST00000466897 ATP5J2P56134 94 aa12.85□□□□□ -0.35
NPHP4-205ENST00000466897 ZNF154Q13106 437 aa12.85□□□□□ -0.35
NPHP4-205ENST00000466897 INSL4Q14641 139 aa12.85□□□□□ -0.35
NPHP4-205ENST00000466897 GDPGP1Q6ZNW5 385 aa12.85□□□□□ -0.35
NPHP4-205ENST00000466897 LHFPL2Q6ZUX7 228 aa12.85□□□□□ -0.35
NPHP4-205ENST00000466897 WDR86Q86TI4 376 aa12.85□□□□□ -0.35
NPHP4-205ENST00000466897 ZNF573Q86YE8 665 aa12.85□□□□□ -0.35
NPHP4-205ENST00000466897 CDH26Q8IXH8 852 aa12.85□□□□□ -0.35
NPHP4-205ENST00000466897 OR1M1Q8NGA1 313 aa12.85□□□□□ -0.35
NPHP4-205ENST00000466897 OR13C9Q8NGT0 318 aa12.85□□□□□ -0.35
NPHP4-205ENST00000466897 RDH5Q92781 318 aa12.85□□□□□ -0.35
NPHP4-205ENST00000466897 OR51I2Q9H344 312 aa12.85□□□□□ -0.35
NPHP4-205ENST00000466897 GCM1Q9NP62 436 aa12.85□□□□□ -0.35
NPHP4-205ENST00000466897 TMEM138Q9NPI0 162 aa12.85□□□□□ -0.35
NPHP4-205ENST00000466897 TRAV8-7A0A075B6U6 113 aa12.84□□□□□ -0.35
NPHP4-205ENST00000466897 MEGF11A6BM72 1044 aa12.84□□□□□ -0.35
NPHP4-205ENST00000466897 TRIM64BA6NI03 449 aa12.84□□□□□ -0.35
NPHP4-205ENST00000466897 RP2O75695 350 aa12.84□□□□□ -0.35
NPHP4-205ENST00000466897 DAOP14920 347 aa12.84□□□□□ -0.35
NPHP4-205ENST00000466897 RBP2P50120 134 aa12.84□□□□□ -0.35
NPHP4-205ENST00000466897 GPM6AP51674 278 aa12.84□□□□□ -0.35
NPHP4-205ENST00000466897 HSD17B12Q53GQ0 312 aa12.84□□□□□ -0.35
NPHP4-205ENST00000466897 PRSS57Q6UWY2 283 aa12.84□□□□□ -0.35
NPHP4-205ENST00000466897 NKAIN3Q8N8D7 197 aa12.84□□□□□ -0.35
NPHP4-205ENST00000466897 BORCS8Q96FH0 119 aa12.84□□□□□ -0.35
NPHP4-205ENST00000466897 FOXC2Q99958 501 aa12.84□□□□□ -0.35
NPHP4-205ENST00000466897 PKIBQ9C010 78 aa12.84□□□□□ -0.35
NPHP4-205ENST00000466897 PPIL3Q9H2H8 161 aaKnown RBP12.84□□□□□ -0.35
NPHP4-205ENST00000466897 FN3KRPQ9HA64 309 aa12.84□□□□□ -0.35
NPHP4-205ENST00000466897 SSR3Q9UNL2 185 aa12.84□□□□□ -0.35
NPHP4-205ENST00000466897 PPP1R3CQ9UQK1 317 aa12.84□□□□□ -0.35
NPHP4-205ENST00000466897 POLQO75417 2590 aa12.83□□□□□ -0.35
NPHP4-205ENST00000466897 MAGEB3O15480 346 aa12.83□□□□□ -0.36
NPHP4-205ENST00000466897 NDUFS7O75251 213 aa12.83□□□□□ -0.36
NPHP4-205ENST00000466897 FSTL3O95633 263 aa12.83□□□□□ -0.36
NPHP4-205ENST00000466897 SRMP19623 302 aa12.83□□□□□ -0.36
NPHP4-205ENST00000466897 GADD45AP24522 165 aa12.83□□□□□ -0.36
NPHP4-205ENST00000466897 MPZP25189 248 aa12.83□□□□□ -0.36
NPHP4-205ENST00000466897 BDKRB2P30411 391 aa12.83□□□□□ -0.36
NPHP4-205ENST00000466897 ATP1B3P54709 279 aa12.83□□□□□ -0.36
NPHP4-205ENST00000466897 DSCR9P59020 149 aa12.83□□□□□ -0.36
NPHP4-205ENST00000466897 SPRNQ5BIV9 151 aa12.83□□□□□ -0.36
NPHP4-205ENST00000466897 FAM27D1Q5T7N8 215 aa12.83□□□□□ -0.36
NPHP4-205ENST00000466897 DNM1P46Q6ZS02 220 aa12.83□□□□□ -0.36
NPHP4-205ENST00000466897 C11orf53Q8IXP5 236 aa12.83□□□□□ -0.36
NPHP4-205ENST00000466897 OR51A2Q8NGJ7 313 aa12.83□□□□□ -0.36
NPHP4-205ENST00000466897 HPS1Q92902 700 aa12.83□□□□□ -0.36
NPHP4-205ENST00000466897 PERPQ96FX8 193 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms