RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 BIRC7Q96CA5 298 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 CMBLQ96DG6 245 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 NUS1Q96E22 293 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 SMIM10Q96HG1 83 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 AKR1E2Q96JD6 320 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 CAPNS2Q96L46 248 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 TSNAXQ99598 290 aaKnown RBP2.73□□□□□ -1.97
VPS13D-203ENST00000466732 THTPAQ9BU02 230 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 FICDQ9BVA6 458 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 NAA50Q9GZZ1 169 aaKnown RBP2.73□□□□□ -1.97
VPS13D-203ENST00000466732 OR2AG1Q9H205 316 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 DSN1Q9H410 356 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 PTGES2Q9H7Z7 377 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 EML4Q9HC35 981 aaKnown RBP2.73□□□□□ -1.97
VPS13D-203ENST00000466732 HRASLSQ9HDD0 168 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 NLE1Q9NVX2 485 aaPredicted RBP2.73□□□□□ -1.97
VPS13D-203ENST00000466732 SPG21Q9NZD8 308 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 CALML5Q9NZT1 146 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 ONECUT1Q9UBC0 465 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 SEC14L3Q9UDX4 400 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 NUFIP1Q9UHK0 495 aaKnown RBP2.73□□□□□ -1.97
VPS13D-203ENST00000466732 PRO0461Q9UI25 63 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 RIMS3Q9UJD0 308 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 PITPNC1Q9UKF7 332 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 PRPF19Q9UMS4 504 aaKnown RBP2.73□□□□□ -1.97
VPS13D-203ENST00000466732 NPTNQ9Y639 398 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 LAMB4A4D0S4 1761 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 RIC1Q4ADV7 1423 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 MYO5AQ9Y4I1 1855 aaKnown RBP2.73□□□□□ -1.97
VPS13D-203ENST00000466732 MICAL3Q7RTP6 2002 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 TRPM2O94759 1503 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 AGLP35573 1532 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 NEXMIFQ5QGS0 1516 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 ZFYVE16Q7Z3T8 1539 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 DLC1Q96QB1 1528 aa2.73□□□□□ -1.97
VPS13D-203ENST00000466732 TRIP11Q15643 1979 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 NFASCO94856 1347 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 MAP3K4Q9Y6R4 1608 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 ANKRD36CQ5JPF3 1778 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 PLXND1Q9Y4D7 1925 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 TMEM129A0AVI4 362 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 H0Y9J4 135 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 TEX46H3BTG2 121 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 H7C417 338 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 SGK494L7N484 410 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 PDXKO00764 312 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 TNFSF11O14788 317 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 RTL8CO15255 209 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 CHADO15335 359 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 ZNF208O43345 1280 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 TPST1O60507 370 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 RP2O75695 350 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 OR4F21O95013 312 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 TSPOAP1O95153 1857 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 STBD1O95210 358 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 FADS2O95864 444 aaKnown RBP2.72□□□□□ -1.97
VPS13D-203ENST00000466732 IFNA5P01569 189 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 OR10J4P0C629 311 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 SLC35G4P0C7Q5 338 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 C1GALT1C1LP0DN25 315 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 UCHL3P15374 230 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 RPS3P23396 243 aaKnown RBP eCLIP2.72□□□□□ -1.97
VPS13D-203ENST00000466732 S100A7P31151 101 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 DLSTP36957 453 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 QARSP47897 775 aaKnown RBP2.72□□□□□ -1.97
VPS13D-203ENST00000466732 RGS4P49798 205 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 PPOXP50336 477 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 UCP2P55851 309 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 KRTAP10-8P60410 259 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 DCDP81605 110 aaKnown RBP2.72□□□□□ -1.97
VPS13D-203ENST00000466732 EMX1Q04741 257 aaPredicted RBP2.72□□□□□ -1.97
VPS13D-203ENST00000466732 AESQ08117 197 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 PTGES3Q15185 160 aaKnown RBP2.72□□□□□ -1.97
VPS13D-203ENST00000466732 RSU1Q15404 277 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 TGIF1Q15583 401 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 CYP51A1Q16850 503 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 FER1L6Q2WGJ9 1857 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 SCGB2B2Q4G0G5 96 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 AGKQ53H12 422 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 PYY3Q5JQD4 70 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 C9orf129Q5T035 196 aaKnown RBP2.72□□□□□ -1.97
VPS13D-203ENST00000466732 SAMD13Q5VXD3 122 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 RAET1LQ5VY80 246 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 OR4F3Q6IEY1 312 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 ZNF773Q6PK81 442 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 TMEM220Q6QAJ8 160 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 LANCL3Q6ZV70 420 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 ZNF546Q86UE3 836 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 LRRC28Q86X40 367 aaPredicted RBP2.72□□□□□ -1.97
VPS13D-203ENST00000466732 SNX29P2Q8IUI4 249 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 DDX60Q8IY21 1712 aaKnown RBP2.72□□□□□ -1.97
VPS13D-203ENST00000466732 NALCNQ8IZF0 1738 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 TMEM156Q8N614 296 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 FADS6Q8N9I5 356 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 NECAP1Q8NC96 275 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 FAM71CQ8NEG0 241 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 OR51L1Q8NGJ5 315 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 OR8D4Q8NGM9 314 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 OR10K1Q8NGX5 313 aa2.72□□□□□ -1.97
VPS13D-203ENST00000466732 OR4L1Q8NH43 312 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms