RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 MGLLQ99685 303 aa8.21□□□□□ -1.1
RTFDC1-205ENST00000466260 CCDC32Q9BV29 185 aa8.21□□□□□ -1.1
RTFDC1-205ENST00000466260 BEX2Q9BXY8 128 aa8.21□□□□□ -1.1
RTFDC1-205ENST00000466260 SLIRPQ9GZT3 109 aaKnown RBP8.21□□□□□ -1.1
RTFDC1-205ENST00000466260 NXF2Q9GZY0 626 aaKnown RBP8.21□□□□□ -1.1
RTFDC1-205ENST00000466260 PPP1R3EQ9H7J1 279 aa8.21□□□□□ -1.1
RTFDC1-205ENST00000466260 ADGRL4Q9HBW9 690 aa8.21□□□□□ -1.1
RTFDC1-205ENST00000466260 GCM1Q9NP62 436 aa8.21□□□□□ -1.1
RTFDC1-205ENST00000466260 PCDHB10Q9UN67 800 aa8.21□□□□□ -1.1
RTFDC1-205ENST00000466260 STUB1Q9UNE7 303 aa8.21□□□□□ -1.1
RTFDC1-205ENST00000466260 EXOSC1Q9Y3B2 195 aaKnown RBP8.21□□□□□ -1.1
RTFDC1-205ENST00000466260 DOCK11Q5JSL3 2073 aa8.2□□□□□ -1.1
RTFDC1-205ENST00000466260 hCG_38984A0A1B0GV85 526 aa8.2□□□□□ -1.1
RTFDC1-205ENST00000466260 hCG_1807616A0A1W2PRN6 198 aa8.2□□□□□ -1.1
RTFDC1-205ENST00000466260 METTL15A6NJ78 407 aa8.2□□□□□ -1.1
RTFDC1-205ENST00000466260 ANKRD30BLA7E2S9 258 aa8.2□□□□□ -1.1
RTFDC1-205ENST00000466260 B4DSR2 109 aa8.2□□□□□ -1.1
RTFDC1-205ENST00000466260 ZNF670-ZNF695F2Z2N8 137 aa8.2□□□□□ -1.1
RTFDC1-205ENST00000466260 H3BSH0 61 aa8.2□□□□□ -1.1
RTFDC1-205ENST00000466260 IGHV2-70P01814 119 aa8.2□□□□□ -1.1
RTFDC1-205ENST00000466260 IGHV2-5P01817 119 aa8.2□□□□□ -1.1
RTFDC1-205ENST00000466260 MSMBP08118 114 aa8.2□□□□□ -1.1
RTFDC1-205ENST00000466260 HNF1AP20823 631 aa8.2□□□□□ -1.1
RTFDC1-205ENST00000466260 CD80P33681 288 aa8.2□□□□□ -1.1
RTFDC1-205ENST00000466260 ATP6V1E1P36543 226 aa8.2□□□□□ -1.1
RTFDC1-205ENST00000466260 RIDAP52758 137 aaKnown RBP8.2□□□□□ -1.1
RTFDC1-205ENST00000466260 PSMA6P60900 246 aaKnown RBP8.2□□□□□ -1.1
RTFDC1-205ENST00000466260 VBP1P61758 197 aa8.2□□□□□ -1.1
RTFDC1-205ENST00000466260 LMO4P61968 165 aa8.2□□□□□ -1.1
RTFDC1-205ENST00000466260 BTG1P62324 171 aa8.2□□□□□ -1.1
RTFDC1-205ENST00000466260 LCN2P80188 198 aa8.2□□□□□ -1.1
RTFDC1-205ENST00000466260 FAM3AP98173 230 aa8.2□□□□□ -1.1
RTFDC1-205ENST00000466260 RAB40BQ12829 278 aa8.2□□□□□ -1.1
RTFDC1-205ENST00000466260 MLLT11Q13015 90 aaPredicted RBP8.2□□□□□ -1.1
RTFDC1-205ENST00000466260 ZMYND11Q15326 602 aa8.2□□□□□ -1.1
RTFDC1-205ENST00000466260 MPPED2Q15777 294 aa8.2□□□□□ -1.1
RTFDC1-205ENST00000466260 FAM120AOSQ5T036 256 aa8.2□□□□□ -1.1
RTFDC1-205ENST00000466260 KCTD18Q6PI47 426 aaPredicted RBP8.2□□□□□ -1.1
RTFDC1-205ENST00000466260 PRIMA1Q86XR5 153 aa8.2□□□□□ -1.1
RTFDC1-205ENST00000466260 OR10H4Q8NGA5 316 aa8.2□□□□□ -1.1
RTFDC1-205ENST00000466260 OR52H1Q8NGJ2 320 aa8.2□□□□□ -1.1
RTFDC1-205ENST00000466260 OR51F2Q8NH61 342 aa8.2□□□□□ -1.1
RTFDC1-205ENST00000466260 SETD6Q8TBK2 473 aa8.2□□□□□ -1.1
RTFDC1-205ENST00000466260 AP3S1Q92572 193 aa8.2□□□□□ -1.1
RTFDC1-205ENST00000466260 PPP1R14AQ96A00 147 aa8.2□□□□□ -1.1
RTFDC1-205ENST00000466260 CEP19Q96LK0 163 aa8.2□□□□□ -1.1
RTFDC1-205ENST00000466260 OR8B4Q96RC9 309 aa8.2□□□□□ -1.1
RTFDC1-205ENST00000466260 PAPOLGQ9BWT3 736 aaKnown RBP8.2□□□□□ -1.1
RTFDC1-205ENST00000466260 OPA3Q9H6K4 179 aa8.2□□□□□ -1.1
RTFDC1-205ENST00000466260 NIPAL2Q9H841 368 aa8.2□□□□□ -1.1
RTFDC1-205ENST00000466260 MRPS18AQ9NVS2 196 aaKnown RBP8.2□□□□□ -1.1
RTFDC1-205ENST00000466260 HIF1ANQ9NWT6 349 aa8.2□□□□□ -1.1
RTFDC1-205ENST00000466260 AASSQ9UDR5 926 aa8.2□□□□□ -1.1
RTFDC1-205ENST00000466260 SSR3Q9UNL2 185 aa8.2□□□□□ -1.1
RTFDC1-205ENST00000466260 DIMT1Q9UNQ2 313 aaKnown RBP8.2□□□□□ -1.1
RTFDC1-205ENST00000466260 GSTK1Q9Y2Q3 226 aa8.2□□□□□ -1.1
RTFDC1-205ENST00000466260 SONP18583 2426 aaKnown RBP8.2□□□□□ -1.1
RTFDC1-205ENST00000466260 ZANQ9Y493 2812 aa8.2□□□□□ -1.1
RTFDC1-205ENST00000466260 CUBNO60494 3623 aa8.19□□□□□ -1.1
RTFDC1-205ENST00000466260 MTORP42345 2549 aa8.19□□□□□ -1.1
RTFDC1-205ENST00000466260 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.19□□□□□ -1.1
RTFDC1-205ENST00000466260 TMEM269A0A1B0GVZ9 245 aa8.19□□□□□ -1.1
RTFDC1-205ENST00000466260 FUOMA2VDF0 154 aa8.19□□□□□ -1.1
RTFDC1-205ENST00000466260 TMEM178BH3BS89 294 aa8.19□□□□□ -1.1
RTFDC1-205ENST00000466260 RPP14O95059 124 aaKnown RBP8.19□□□□□ -1.1
RTFDC1-205ENST00000466260 GALP22466 123 aa8.19□□□□□ -1.1
RTFDC1-205ENST00000466260 CFL1P23528 166 aaKnown RBP8.19□□□□□ -1.1
RTFDC1-205ENST00000466260 SRP14P37108 136 aaKnown RBP8.19□□□□□ -1.1
RTFDC1-205ENST00000466260 GNALP38405 381 aa8.19□□□□□ -1.1
RTFDC1-205ENST00000466260 PMELP40967 661 aa8.19□□□□□ -1.1
RTFDC1-205ENST00000466260 GSK3AP49840 483 aa8.19□□□□□ -1.1
RTFDC1-205ENST00000466260 PSMD7P51665 324 aa8.19□□□□□ -1.1
RTFDC1-205ENST00000466260 GMFBP60983 142 aa8.19□□□□□ -1.1
RTFDC1-205ENST00000466260 SEC61A1P61619 476 aaKnown RBP8.19□□□□□ -1.1
RTFDC1-205ENST00000466260 MFGE8Q08431 387 aaPredicted RBP8.19□□□□□ -1.1
RTFDC1-205ENST00000466260 SPHARQ15513 63 aa8.19□□□□□ -1.1
RTFDC1-205ENST00000466260 MED22Q15528 200 aa8.19□□□□□ -1.1
RTFDC1-205ENST00000466260 SMN1Q16637 294 aaKnown RBP8.19□□□□□ -1.1
RTFDC1-205ENST00000466260 ODF4Q2M2E3 257 aa8.19□□□□□ -1.1
RTFDC1-205ENST00000466260 DMRTC1Q5HYR2 192 aa8.19□□□□□ -1.1
RTFDC1-205ENST00000466260 ZNF322Q6U7Q0 402 aaPredicted RBP8.19□□□□□ -1.1
RTFDC1-205ENST00000466260 ZNF826PQ6ZT77 177 aa8.19□□□□□ -1.1
RTFDC1-205ENST00000466260 SSX6Q7RTT6 188 aa8.19□□□□□ -1.1
RTFDC1-205ENST00000466260 PRSS45Q7RTY3 260 aa8.19□□□□□ -1.1
RTFDC1-205ENST00000466260 KLHL36Q8N4N3 616 aa8.19□□□□□ -1.1
RTFDC1-205ENST00000466260 YIPF7Q8N8F6 280 aa8.19□□□□□ -1.1
RTFDC1-205ENST00000466260 DEFB108BQ8NET1 73 aa8.19□□□□□ -1.1
RTFDC1-205ENST00000466260 OR11L1Q8NGX0 322 aa8.19□□□□□ -1.1
RTFDC1-205ENST00000466260 PIGCQ92535 297 aa8.19□□□□□ -1.1
RTFDC1-205ENST00000466260 TMEM186Q96B77 213 aa8.19□□□□□ -1.1
RTFDC1-205ENST00000466260 FAM71F1Q96KD3 344 aaPredicted RBP8.19□□□□□ -1.1
RTFDC1-205ENST00000466260 PBOV1Q9GZY1 135 aa8.19□□□□□ -1.1
RTFDC1-205ENST00000466260 C1orf123Q9NWV4 160 aa8.19□□□□□ -1.1
RTFDC1-205ENST00000466260 CDC42EP3Q9UKI2 254 aa8.19□□□□□ -1.1
RTFDC1-205ENST00000466260 PAIP2BQ9ULR5 123 aaKnown RBP8.19□□□□□ -1.1
RTFDC1-205ENST00000466260 TMEM14AQ9Y6G1 99 aa8.19□□□□□ -1.1
RTFDC1-205ENST00000466260 hCG_2014768A0A024R1R8 64 aa8.18□□□□□ -1.1
RTFDC1-205ENST00000466260 PPIAL4EA0A075B759 164 aa8.18□□□□□ -1.1
RTFDC1-205ENST00000466260 LRRC30A6NM36 301 aa8.18□□□□□ -1.1
RTFDC1-205ENST00000466260 ZNF850A8MQ14 1090 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms