RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 RABL2BQ9UNT1 228 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 OSGIN2Q9Y236 505 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 PEX16Q9Y5Y5 336 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 V9GY05 133 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 ESPL1Q14674 2120 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 BSNQ9UPA5 3926 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 COL6A6A6NMZ7 2263 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 hCG_38984A0A1B0GV85 526 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 A0A1B0GWJ7 208 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 C5orf49A4QMS7 147 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 P2RY10O00398 339 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 SCAF4O95104 1147 aaKnown RBP4.7□□□□□ -1.66
VPS41-211ENST00000466017 CST4P01036 141 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 ERCC1P07992 297 aaPredicted RBP4.7□□□□□ -1.66
VPS41-211ENST00000466017 CALCBP10092 127 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 SLC2A1P11166 492 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 GYPEP15421 78 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 SELEP16581 610 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 ATF1P18846 271 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 RAB3AP20336 220 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 KITLGP21583 273 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 BMP5P22003 454 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 CALRP27797 417 aaKnown RBP4.7□□□□□ -1.66
VPS41-211ENST00000466017 BDKRB2P30411 391 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 GLRXP35754 106 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 TGFBR1P36897 503 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 WNT5AP41221 380 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 ALDH3B1P43353 468 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 ADORA2A-AS1P86434 159 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 NAAAQ02083 359 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 NHLH2Q02577 135 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 TNK1Q13470 666 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 INSL4Q14641 139 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 PPA1Q15181 289 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 TAB1Q15750 504 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 SNAI3Q3KNW1 292 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 MBNL2Q5VZF2 373 aaKnown RBP4.7□□□□□ -1.66
VPS41-211ENST00000466017 GLT8D1Q68CQ7 371 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 MZT2AQ6P582 158 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 METAP1DQ6UB28 335 aaPredicted RBP4.7□□□□□ -1.66
VPS41-211ENST00000466017 C3P1Q6ZMU1 363 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 LDLRAD3Q86YD5 345 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 NKAIN3Q8N8D7 197 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 SEMA6DQ8NFY4 1073 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 OR51A4Q8NGJ6 313 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 OR6Q1Q8NGQ2 317 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 OR13C3Q8NGS6 347 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 OR13C5Q8NGS8 318 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 OR10AC1Q8NH08 325 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 NDNFQ8TB73 568 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 TBC1D15Q8TC07 691 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 OR51E1Q8TCB6 317 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 S100ZQ8WXG8 99 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 SLC7A6Q92536 515 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 PTX4Q96A99 478 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 SPSB1Q96BD6 273 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 S100PBPQ96BU1 408 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 FGGYQ96C11 551 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 HAVCR1Q96D42 359 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 ADAT3Q96EY9 351 aaPredicted RBP4.7□□□□□ -1.66
VPS41-211ENST00000466017 REEP6Q96HR9 211 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 RAX2Q96IS3 184 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 RADILQ96JH8 1075 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 TSC22D3Q99576 134 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 SOSTQ9BQB4 213 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 CHST5Q9GZS9 411 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 SLC22A4Q9H015 551 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 CDH20Q9HBT6 801 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 ABCB9Q9NP78 766 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 CKLFQ9UBR5 152 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 SLC23A1Q9UHI7 598 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 SPATA2Q9UM82 520 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 STARD10Q9Y365 291 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 SPEF1Q9Y4P9 236 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 MPC1Q9Y5U8 109 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 MGAQ8IWI9 3026 aa4.7□□□□□ -1.66
VPS41-211ENST00000466017 IGF2RP11717 2491 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 TPRP12270 2363 aaKnown RBP4.69□□□□□ -1.66
VPS41-211ENST00000466017 ANKRD11Q6UB99 2663 aaPredicted RBP4.69□□□□□ -1.66
VPS41-211ENST00000466017 TRAV8-7A0A075B6U6 113 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 IGHV1-18A0A0C4DH31 117 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 ZNF816-ZNF321PA0A0X1KG74 233 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 WIPF3A6NGB9 483 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 IFITM5A6NNB3 132 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 IQCF6A8MYZ5 107 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 EEF1E1-BLOC1S5C9J1V9 151 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 AIPO00170 330 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 SLC17A2O00624 439 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 EEF1E1O43324 174 aaKnown RBP4.69□□□□□ -1.66
VPS41-211ENST00000466017 SULT1B1O43704 296 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 SMPD2O60906 423 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 NCR1O76036 304 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 GOSR1O95249 250 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 AMY1AP04745 511 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 ACAA1P09110 424 aaPredicted RBP4.69□□□□□ -1.66
VPS41-211ENST00000466017 CECR9P0C854 216 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 ADRA2CP18825 462 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 PRKACBP22694 351 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 CD40LGP29965 261 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 CCKARP32238 428 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms