RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 SGCEO43556 437 aa16.33■□□□□ 0.2
TSPAN4-210ENST00000464987 SYNGR3O43761 229 aa16.33■□□□□ 0.2
TSPAN4-210ENST00000464987 HTR3BO95264 441 aa16.33■□□□□ 0.2
TSPAN4-210ENST00000464987 PNLIPRP3Q17RR3 467 aa16.33■□□□□ 0.2
TSPAN4-210ENST00000464987 VAX1Q5SQQ9 334 aa16.33■□□□□ 0.2
TSPAN4-210ENST00000464987 JMJD6Q6NYC1 403 aaPredicted RBP16.33■□□□□ 0.2
TSPAN4-210ENST00000464987 OR10D3Q8NH80 312 aa16.33■□□□□ 0.2
TSPAN4-210ENST00000464987 OR1S1Q8NH92 325 aa16.33■□□□□ 0.2
TSPAN4-210ENST00000464987 HAS2Q92819 552 aa16.33■□□□□ 0.2
TSPAN4-210ENST00000464987 SF3B5Q9BWJ5 86 aaKnown RBP16.33■□□□□ 0.2
TSPAN4-210ENST00000464987 PECRQ9BY49 303 aa16.33■□□□□ 0.2
TSPAN4-210ENST00000464987 COMMD9Q9P000 198 aa16.33■□□□□ 0.2
TSPAN4-210ENST00000464987 ZNF581Q9P0T4 197 aa16.33■□□□□ 0.2
TSPAN4-210ENST00000464987 MED13Q9UHV7 2174 aa16.32■□□□□ 0.2
TSPAN4-210ENST00000464987 DBX1A6NMT0 343 aa16.32■□□□□ 0.2
TSPAN4-210ENST00000464987 DUS4LO95620 317 aaKnown RBP16.32■□□□□ 0.2
TSPAN4-210ENST00000464987 ZNF32P17041 273 aa16.32■□□□□ 0.2
TSPAN4-210ENST00000464987 ALDH3B1P43353 468 aa16.32■□□□□ 0.2
TSPAN4-210ENST00000464987 FGL1Q08830 312 aa16.32■□□□□ 0.2
TSPAN4-210ENST00000464987 FAM74A1Q5RGS3 127 aa16.32■□□□□ 0.2
TSPAN4-210ENST00000464987 FAHD2BQ6P2I3 314 aaPredicted RBP16.32■□□□□ 0.2
TSPAN4-210ENST00000464987 C6orf15Q6UXA7 325 aaPredicted RBP16.32■□□□□ 0.2
TSPAN4-210ENST00000464987 Q6ZSR3 168 aa16.32■□□□□ 0.2
TSPAN4-210ENST00000464987 GLRX5Q86SX6 157 aa16.32■□□□□ 0.2
TSPAN4-210ENST00000464987 OR5M9Q8NGP3 310 aa16.32■□□□□ 0.2
TSPAN4-210ENST00000464987 OR13G1Q8NGZ3 307 aa16.32■□□□□ 0.2
TSPAN4-210ENST00000464987 PP6455Q8WZ26 134 aa16.32■□□□□ 0.2
TSPAN4-210ENST00000464987 ST8SIA2Q92186 375 aa16.32■□□□□ 0.2
TSPAN4-210ENST00000464987 SPTSSAQ969W0 71 aa16.32■□□□□ 0.2
TSPAN4-210ENST00000464987 INTS12Q96CB8 462 aaKnown RBP16.32■□□□□ 0.2
TSPAN4-210ENST00000464987 FAHD2AQ96GK7 314 aa16.32■□□□□ 0.2
TSPAN4-210ENST00000464987 ADGRG7Q96K78 797 aa16.32■□□□□ 0.2
TSPAN4-210ENST00000464987 P4HTMQ9NXG6 502 aa16.32■□□□□ 0.2
TSPAN4-210ENST00000464987 KNTC1P50748 2209 aa16.32■□□□□ 0.2
TSPAN4-210ENST00000464987 IGKV1D-8A0A087WSZ0 117 aa16.31■□□□□ 0.2
TSPAN4-210ENST00000464987 C13orf42A0A1B0GVH6 325 aa16.31■□□□□ 0.2
TSPAN4-210ENST00000464987 ANGPTL7O43827 346 aa16.31■□□□□ 0.2
TSPAN4-210ENST00000464987 GP1BAP07359 652 aa16.31■□□□□ 0.2
TSPAN4-210ENST00000464987 CTRB1P17538 263 aa16.31■□□□□ 0.2
TSPAN4-210ENST00000464987 AMY2BP19961 511 aa16.31■□□□□ 0.2
TSPAN4-210ENST00000464987 AGTR1P30556 359 aa16.31■□□□□ 0.2
TSPAN4-210ENST00000464987 SNU13P55769 128 aaKnown RBP16.31■□□□□ 0.2
TSPAN4-210ENST00000464987 AADACL3Q5VUY0 350 aa16.31■□□□□ 0.2
TSPAN4-210ENST00000464987 CTRB2Q6GPI1 263 aa16.31■□□□□ 0.2
TSPAN4-210ENST00000464987 SPINK14Q6IE38 97 aa16.31■□□□□ 0.2
TSPAN4-210ENST00000464987 C6orf201Q7Z4U5 140 aa16.31■□□□□ 0.2
TSPAN4-210ENST00000464987 GPR137CQ8N3F9 429 aa16.31■□□□□ 0.2
TSPAN4-210ENST00000464987 OR5H2Q8NGV7 314 aa16.31■□□□□ 0.2
TSPAN4-210ENST00000464987 PSMF1Q92530 271 aa16.31■□□□□ 0.2
TSPAN4-210ENST00000464987 ZNF75AQ96N20 296 aa16.31■□□□□ 0.2
TSPAN4-210ENST00000464987 VRK1Q99986 396 aaPredicted RBP16.31■□□□□ 0.2
TSPAN4-210ENST00000464987 TMEM38BQ9NVV0 291 aa16.31■□□□□ 0.2
TSPAN4-210ENST00000464987 DNAJC13O75165 2243 aa16.31■□□□□ 0.2
TSPAN4-210ENST00000464987 ZNF407Q9C0G0 2248 aa16.31■□□□□ 0.2
TSPAN4-210ENST00000464987 LGALS8O00214 317 aa16.31■□□□□ 0.2
TSPAN4-210ENST00000464987 MTRF1O75570 445 aaKnown RBP16.31■□□□□ 0.2
TSPAN4-210ENST00000464987 PLATP00750 562 aa16.31■□□□□ 0.2
TSPAN4-210ENST00000464987 SLC25A4P12235 298 aa16.31■□□□□ 0.2
TSPAN4-210ENST00000464987 GABRR1P24046 479 aa16.31■□□□□ 0.2
TSPAN4-210ENST00000464987 SERPINF1P36955 418 aa16.31■□□□□ 0.2
TSPAN4-210ENST00000464987 RFC3P40938 356 aa16.31■□□□□ 0.2
TSPAN4-210ENST00000464987 SLC9A3R2Q15599 337 aa16.31■□□□□ 0.2
TSPAN4-210ENST00000464987 AAED1Q7RTV5 226 aa16.31■□□□□ 0.2
TSPAN4-210ENST00000464987 KCNRGQ8N5I3 272 aa16.31■□□□□ 0.2
TSPAN4-210ENST00000464987 ABHD3Q8WU67 409 aa16.31■□□□□ 0.2
TSPAN4-210ENST00000464987 HDHD3Q9BSH5 251 aaPredicted RBP16.31■□□□□ 0.2
TSPAN4-210ENST00000464987 ARID1AO14497 2285 aa16.31■□□□□ 0.2
TSPAN4-210ENST00000464987 IGKV1-27A0A075B6S5 117 aa16.3■□□□□ 0.2
TSPAN4-210ENST00000464987 MPTX1A8MV57 137 aa16.3■□□□□ 0.2
TSPAN4-210ENST00000464987 SPRY1O43609 319 aaPredicted RBP16.3■□□□□ 0.2
TSPAN4-210ENST00000464987 HPP00738 406 aa16.3■□□□□ 0.2
TSPAN4-210ENST00000464987 IGHEP01854 428 aa16.3■□□□□ 0.2
TSPAN4-210ENST00000464987 DLSTP36957 453 aa16.3■□□□□ 0.2
TSPAN4-210ENST00000464987 LUMP51884 338 aaPredicted RBP16.3■□□□□ 0.2
TSPAN4-210ENST00000464987 SIGLEC14Q08ET2 396 aa16.3■□□□□ 0.2
TSPAN4-210ENST00000464987 SSPNQ14714 243 aa16.3■□□□□ 0.2
TSPAN4-210ENST00000464987 H3F3CQ6NXT2 135 aa16.3■□□□□ 0.2
TSPAN4-210ENST00000464987 SLC16A14Q7RTX9 510 aa16.3■□□□□ 0.2
TSPAN4-210ENST00000464987 GALNTL5Q7Z4T8 443 aa16.3■□□□□ 0.2
TSPAN4-210ENST00000464987 FAM219AQ8IW50 185 aa16.3■□□□□ 0.2
TSPAN4-210ENST00000464987 ARRDC1Q8N5I2 433 aa16.3■□□□□ 0.2
TSPAN4-210ENST00000464987 CSNK2A3Q8NEV1 391 aa16.3■□□□□ 0.2
TSPAN4-210ENST00000464987 KCNE4Q8WWG9 221 aa16.3■□□□□ 0.2
TSPAN4-210ENST00000464987 REEP6Q96HR9 211 aa16.3■□□□□ 0.2
TSPAN4-210ENST00000464987 RTBDNQ9BSG5 229 aaPredicted RBP16.3■□□□□ 0.2
TSPAN4-210ENST00000464987 ARRDC1-AS1Q9H2J1 176 aa16.3■□□□□ 0.2
TSPAN4-210ENST00000464987 MBD2Q9UBB5 411 aa16.3■□□□□ 0.2
TSPAN4-210ENST00000464987 MCTS1Q9ULC4 181 aaKnown RBP16.3■□□□□ 0.2
TSPAN4-210ENST00000464987 A0A0D9SG52 128 aa16.3■□□□□ 0.2
TSPAN4-210ENST00000464987 C5orf51A6NDU8 294 aa16.3■□□□□ 0.2
TSPAN4-210ENST00000464987 MSTNO14793 375 aa16.3■□□□□ 0.2
TSPAN4-210ENST00000464987 IGHV3-9P01782 118 aa16.3■□□□□ 0.2
TSPAN4-210ENST00000464987 GDF1P27539 372 aa16.3■□□□□ 0.2
TSPAN4-210ENST00000464987 SUPT4H1P63272 117 aaKnown RBP16.3■□□□□ 0.2
TSPAN4-210ENST00000464987 CTAG1AP78358 180 aa16.3■□□□□ 0.2
TSPAN4-210ENST00000464987 RAB35Q15286 201 aa16.3■□□□□ 0.2
TSPAN4-210ENST00000464987 CEACAM16Q2WEN9 425 aa16.3■□□□□ 0.2
TSPAN4-210ENST00000464987 TMEM128Q5BJH2 165 aa16.3■□□□□ 0.2
TSPAN4-210ENST00000464987 RAB11FIP2Q7L804 512 aa16.3■□□□□ 0.2
TSPAN4-210ENST00000464987 SEMA6DQ8NFY4 1073 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms