RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 MAP3K5Q99683 1374 aa3.25□□□□□ -1.89
PTCD3-205ENST00000464541 EVC2Q86UK5 1308 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 IGSF9BQ9UPX0 1349 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 TRAV8-7A0A075B6U6 113 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 A0A0A6YYD5 115 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 A0A1B0GW55 424 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 A0A1W2PP18 115 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 A0A1W2PRG6 482 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 ZNF726A6NNF4 738 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 ZNF705GA8MUZ8 300 aaPredicted RBP3.24□□□□□ -1.89
PTCD3-205ENST00000464541 HIDE1A8MVS5 230 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 M0QXV9 152 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 ENSAO43768 121 aaKnown RBP3.24□□□□□ -1.89
PTCD3-205ENST00000464541 CDC40O60508 579 aaKnown RBP eCLIP3.24□□□□□ -1.89
PTCD3-205ENST00000464541 EIF3GO75821 320 aaKnown RBP eCLIP3.24□□□□□ -1.89
PTCD3-205ENST00000464541 SNAP29O95721 258 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 C6orf47O95873 294 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 GCGP01275 180 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 GP1BAP07359 652 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 RPSAP08865 295 aaKnown RBP3.24□□□□□ -1.89
PTCD3-205ENST00000464541 DUX4L2P0CJ85 424 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 DUX4L3P0CJ86 424 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 DUX4L5P0CJ88 424 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 DUX4L6P0CJ89 424 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 DUX4L7P0CJ90 424 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 HLA-GP17693 338 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 CSNK2A2P19784 350 aaPredicted RBP3.24□□□□□ -1.89
PTCD3-205ENST00000464541 RAB5AP20339 215 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 HLA-DMAP28067 261 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 ARL2P36404 184 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 TAS2R39P59534 338 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 RPL31P62899 125 aaKnown RBP3.24□□□□□ -1.89
PTCD3-205ENST00000464541 ZNF92Q03936 586 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 GLO1Q04760 184 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 TWF1Q12792 350 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 ZNHIT3Q15649 155 aaPredicted RBP3.24□□□□□ -1.89
PTCD3-205ENST00000464541 ZBTB6Q15916 424 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 COX19Q49B96 90 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 PDZD11Q5EBL8 140 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 ACTL10Q5JWF8 245 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 HES5Q5TA89 166 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 OGFRL1Q5TC84 451 aaPredicted RBP3.24□□□□□ -1.89
PTCD3-205ENST00000464541 RESP18Q5W5W9 173 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 LPCAT4Q643R3 524 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 DUX4L9Q6RFH8 374 aaPredicted RBP3.24□□□□□ -1.89
PTCD3-205ENST00000464541 CD300LGQ6UXG3 332 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 WDR82Q6UXN9 313 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 ZNF493Q6ZR52 646 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 LHFPL3Q86UP9 236 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 WDR31Q8NA23 367 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 TTLQ8NG68 377 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 OR2Y1Q8NGV0 311 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 OR51A7Q8NH64 312 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 OR5W2Q8NH69 310 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 ENKURQ8TC29 256 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 ZNF75AQ96N20 296 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 PARP12Q9H0J9 701 aaKnown RBP3.24□□□□□ -1.89
PTCD3-205ENST00000464541 DSN1Q9H410 356 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 ZDHHC4Q9NPG8 344 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 FGFR1OP2Q9NVK5 253 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 PLEKHJ1Q9NW61 149 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 FKBP14Q9NWM8 211 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 DUX4Q9UBX2 424 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 RAB23Q9ULC3 237 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 CFL2Q9Y281 166 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 ZNF835Q9Y2P0 537 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 COL1A2P08123 1366 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 RAB3GAP2Q9H2M9 1393 aa3.24□□□□□ -1.89
PTCD3-205ENST00000464541 AK9Q5TCS8 1911 aa3.23□□□□□ -1.89
PTCD3-205ENST00000464541 IGLV2-18A0A075B6J9 118 aa3.23□□□□□ -1.89
PTCD3-205ENST00000464541 A0A1B0GVX0 72 aa3.23□□□□□ -1.89
PTCD3-205ENST00000464541 DFFAO00273 331 aa3.23□□□□□ -1.89
PTCD3-205ENST00000464541 RAD51CO43502 376 aa3.23□□□□□ -1.89
PTCD3-205ENST00000464541 DENRO43583 198 aaKnown RBP3.23□□□□□ -1.89
PTCD3-205ENST00000464541 UTS2O95399 124 aa3.23□□□□□ -1.89
PTCD3-205ENST00000464541 BRI3O95415 125 aa3.23□□□□□ -1.89
PTCD3-205ENST00000464541 HLA-DRAP01903 254 aa3.23□□□□□ -1.89
PTCD3-205ENST00000464541 IFNA6P05013 189 aa3.23□□□□□ -1.89
PTCD3-205ENST00000464541 ARG1P05089 322 aa3.23□□□□□ -1.89
PTCD3-205ENST00000464541 OR8U9P0C7N5 309 aa3.23□□□□□ -1.89
PTCD3-205ENST00000464541 NQO1P15559 274 aaKnown RBP3.23□□□□□ -1.89
PTCD3-205ENST00000464541 AK4P27144 223 aaPredicted RBP3.23□□□□□ -1.89
PTCD3-205ENST00000464541 MAS1LP35410 378 aa3.23□□□□□ -1.89
PTCD3-205ENST00000464541 RAB14P61106 215 aa3.23□□□□□ -1.89
PTCD3-205ENST00000464541 ERCC8Q13216 396 aa3.23□□□□□ -1.89
PTCD3-205ENST00000464541 SLC39A6Q13433 755 aa3.23□□□□□ -1.89
PTCD3-205ENST00000464541 POU2AF1Q16633 256 aa3.23□□□□□ -1.89
PTCD3-205ENST00000464541 IMPG1Q17R60 797 aa3.23□□□□□ -1.89
PTCD3-205ENST00000464541 TMEM249Q2WGJ8 235 aa3.23□□□□□ -1.89
PTCD3-205ENST00000464541 HORMAD1Q86X24 394 aa3.23□□□□□ -1.89
PTCD3-205ENST00000464541 PUSL1Q8N0Z8 303 aaKnown RBP3.23□□□□□ -1.89
PTCD3-205ENST00000464541 CYP4Z2PQ8N1L4 340 aa3.23□□□□□ -1.89
PTCD3-205ENST00000464541 TMEM251Q8N6I4 163 aa3.23□□□□□ -1.89
PTCD3-205ENST00000464541 OR8U1Q8NH10 309 aa3.23□□□□□ -1.89
PTCD3-205ENST00000464541 OR4S2Q8NH73 311 aa3.23□□□□□ -1.89
PTCD3-205ENST00000464541 MED8Q96G25 268 aa3.23□□□□□ -1.89
PTCD3-205ENST00000464541 SCGB3A2Q96PL1 93 aa3.23□□□□□ -1.89
PTCD3-205ENST00000464541 MRPS26Q9BYN8 205 aaKnown RBP3.23□□□□□ -1.89
PTCD3-205ENST00000464541 DHX35Q9H5Z1 703 aaKnown RBP3.23□□□□□ -1.89
PTCD3-205ENST00000464541 ISYNA1Q9NPH2 558 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms