RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 PIGCQ92535 297 aa11.82□□□□□ -0.52
SNRNP40-203ENST00000463988 RPL3LQ92901 407 aaKnown RBP11.82□□□□□ -0.52
SNRNP40-203ENST00000463988 NRBF2Q96F24 287 aa11.82□□□□□ -0.52
SNRNP40-203ENST00000463988 WDR13Q9H1Z4 485 aa11.82□□□□□ -0.52
SNRNP40-203ENST00000463988 DPAGT1Q9H3H5 408 aa11.82□□□□□ -0.52
SNRNP40-203ENST00000463988 ONECUT1Q9UBC0 465 aa11.82□□□□□ -0.52
SNRNP40-203ENST00000463988 LAMP5Q9UJQ1 280 aa11.82□□□□□ -0.52
SNRNP40-203ENST00000463988 VWFP04275 2813 aa11.82□□□□□ -0.52
SNRNP40-203ENST00000463988 ZNF816-ZNF321PA0A0X1KG74 233 aa11.81□□□□□ -0.52
SNRNP40-203ENST00000463988 GPR137BO60478 399 aa11.81□□□□□ -0.52
SNRNP40-203ENST00000463988 FKBP6O75344 327 aa11.81□□□□□ -0.52
SNRNP40-203ENST00000463988 ZNF254O75437 659 aa11.81□□□□□ -0.52
SNRNP40-203ENST00000463988 IGHV4-59P01825 116 aa11.81□□□□□ -0.52
SNRNP40-203ENST00000463988 CAV3P56539 151 aa11.81□□□□□ -0.52
SNRNP40-203ENST00000463988 GNG3P63215 75 aa11.81□□□□□ -0.52
SNRNP40-203ENST00000463988 CBX1P83916 185 aa11.81□□□□□ -0.52
SNRNP40-203ENST00000463988 ROM1Q03395 351 aa11.81□□□□□ -0.52
SNRNP40-203ENST00000463988 IKZF1Q13422 519 aa11.81□□□□□ -0.52
SNRNP40-203ENST00000463988 APOFQ13790 326 aa11.81□□□□□ -0.52
SNRNP40-203ENST00000463988 FLOT2Q14254 428 aa11.81□□□□□ -0.52
SNRNP40-203ENST00000463988 SNAPC1Q16533 368 aa11.81□□□□□ -0.52
SNRNP40-203ENST00000463988 CEACAM21Q3KPI0 293 aa11.81□□□□□ -0.52
SNRNP40-203ENST00000463988 ZBTB37Q5TC79 503 aa11.81□□□□□ -0.52
SNRNP40-203ENST00000463988 KCTD8Q6ZWB6 473 aa11.81□□□□□ -0.52
SNRNP40-203ENST00000463988 SPATA24Q86W54 205 aa11.81□□□□□ -0.52
SNRNP40-203ENST00000463988 OR5T2Q8NGG2 359 aa11.81□□□□□ -0.52
SNRNP40-203ENST00000463988 ANGPTL6Q8NI99 470 aa11.81□□□□□ -0.52
SNRNP40-203ENST00000463988 FAM81AQ8TBF8 368 aa11.81□□□□□ -0.52
SNRNP40-203ENST00000463988 ASB17Q8WXJ9 295 aa11.81□□□□□ -0.52
SNRNP40-203ENST00000463988 LRTOMTQ8WZ04 291 aa11.81□□□□□ -0.52
SNRNP40-203ENST00000463988 TEAD3Q99594 435 aa11.81□□□□□ -0.52
SNRNP40-203ENST00000463988 MROQ9BYG7 248 aa11.81□□□□□ -0.52
SNRNP40-203ENST00000463988 FGF23Q9GZV9 251 aaPredicted RBP11.81□□□□□ -0.52
SNRNP40-203ENST00000463988 FAM206AQ9NX38 181 aa11.81□□□□□ -0.52
SNRNP40-203ENST00000463988 FAM96BQ9Y3D0 163 aa11.81□□□□□ -0.52
SNRNP40-203ENST00000463988 TMEM14AQ9Y6G1 99 aa11.81□□□□□ -0.52
SNRNP40-203ENST00000463988 TMEM269A0A1B0GVZ9 245 aa11.8□□□□□ -0.52
SNRNP40-203ENST00000463988 SIGLEC5O15389 551 aa11.8□□□□□ -0.52
SNRNP40-203ENST00000463988 GYG2O15488 501 aa11.8□□□□□ -0.52
SNRNP40-203ENST00000463988 AKR7A2O43488 359 aa11.8□□□□□ -0.52
SNRNP40-203ENST00000463988 ACAA1P09110 424 aaPredicted RBP11.8□□□□□ -0.52
SNRNP40-203ENST00000463988 EEF1B2P24534 225 aaKnown RBP11.8□□□□□ -0.52
SNRNP40-203ENST00000463988 CRISP1P54107 249 aa11.8□□□□□ -0.52
SNRNP40-203ENST00000463988 LCN1P1Q5VSP4 162 aa11.8□□□□□ -0.52
SNRNP40-203ENST00000463988 TMEM236Q5W0B7 351 aa11.8□□□□□ -0.52
SNRNP40-203ENST00000463988 FAHD1Q6P587 224 aa11.8□□□□□ -0.52
SNRNP40-203ENST00000463988 GDPGP1Q6ZNW5 385 aa11.8□□□□□ -0.52
SNRNP40-203ENST00000463988 TRPM8Q7Z2W7 1104 aa11.8□□□□□ -0.52
SNRNP40-203ENST00000463988 ZNF679Q8IYX0 411 aa11.8□□□□□ -0.52
SNRNP40-203ENST00000463988 Q8N7P7 452 aa11.8□□□□□ -0.52
SNRNP40-203ENST00000463988 OR5A2Q8NGI9 324 aa11.8□□□□□ -0.52
SNRNP40-203ENST00000463988 GAFA1Q96PS6 74 aa11.8□□□□□ -0.52
SNRNP40-203ENST00000463988 CITED1Q99966 193 aa11.8□□□□□ -0.52
SNRNP40-203ENST00000463988 OR51I2Q9H344 312 aa11.8□□□□□ -0.52
SNRNP40-203ENST00000463988 PAPOLBQ9NRJ5 636 aaKnown RBP11.8□□□□□ -0.52
SNRNP40-203ENST00000463988 SNTG1Q9NSN8 517 aa11.8□□□□□ -0.52
SNRNP40-203ENST00000463988 TVP23BQ9NYZ1 205 aa11.8□□□□□ -0.52
SNRNP40-203ENST00000463988 NLKQ9UBE8 527 aa11.8□□□□□ -0.52
SNRNP40-203ENST00000463988 SLC25A10Q9UBX3 287 aaPredicted RBP11.8□□□□□ -0.52
SNRNP40-203ENST00000463988 CCDC182A6NF36 153 aa11.79□□□□□ -0.52
SNRNP40-203ENST00000463988 OR5B21A6NL26 309 aa11.79□□□□□ -0.52
SNRNP40-203ENST00000463988 OR2AT4A6NND4 320 aa11.79□□□□□ -0.52
SNRNP40-203ENST00000463988 RNASEK-C17orf49H0YIS7 233 aa11.79□□□□□ -0.52
SNRNP40-203ENST00000463988 M0R1W7 72 aa11.79□□□□□ -0.52
SNRNP40-203ENST00000463988 IGLV3-1P01715 115 aa11.79□□□□□ -0.52
SNRNP40-203ENST00000463988 FBP1P09467 338 aa11.79□□□□□ -0.52
SNRNP40-203ENST00000463988 GLRA1P23415 457 aa11.79□□□□□ -0.52
SNRNP40-203ENST00000463988 GPM6AP51674 278 aa11.79□□□□□ -0.52
SNRNP40-203ENST00000463988 HCCSP53701 268 aa11.79□□□□□ -0.52
SNRNP40-203ENST00000463988 GMFBP60983 142 aa11.79□□□□□ -0.52
SNRNP40-203ENST00000463988 RIPPLY1Q0D2K3 151 aa11.79□□□□□ -0.52
SNRNP40-203ENST00000463988 DGUOKQ16854 277 aa11.79□□□□□ -0.52
SNRNP40-203ENST00000463988 NCR3LG1Q68D85 454 aa11.79□□□□□ -0.52
SNRNP40-203ENST00000463988 PDZD9Q8IXQ8 264 aa11.79□□□□□ -0.52
SNRNP40-203ENST00000463988 ZNF671Q8TAW3 534 aa11.79□□□□□ -0.52
SNRNP40-203ENST00000463988 H1FXQ92522 213 aaKnown RBP11.79□□□□□ -0.52
SNRNP40-203ENST00000463988 TNFRSF14Q92956 283 aa11.79□□□□□ -0.52
SNRNP40-203ENST00000463988 OR8B4Q96RC9 309 aa11.79□□□□□ -0.52
SNRNP40-203ENST00000463988 METTL8Q9H825 291 aaKnown RBP11.79□□□□□ -0.52
SNRNP40-203ENST00000463988 SIRT7Q9NRC8 400 aa11.79□□□□□ -0.52
SNRNP40-203ENST00000463988 RASL12Q9NYN1 266 aa11.79□□□□□ -0.52
SNRNP40-203ENST00000463988 NUFIP1Q9UHK0 495 aaKnown RBP11.79□□□□□ -0.52
SNRNP40-203ENST00000463988 POMPQ9Y244 141 aa11.79□□□□□ -0.52
SNRNP40-203ENST00000463988 ZNF732B4DXR9 585 aa11.78□□□□□ -0.52
SNRNP40-203ENST00000463988 NPFFO15130 113 aa11.78□□□□□ -0.52
SNRNP40-203ENST00000463988 GSC2O15499 205 aa11.78□□□□□ -0.52
SNRNP40-203ENST00000463988 CLPXO76031 633 aa11.78□□□□□ -0.52
SNRNP40-203ENST00000463988 SELLP14151 372 aa11.78□□□□□ -0.52
SNRNP40-203ENST00000463988 UBE2E1P51965 193 aa11.78□□□□□ -0.52
SNRNP40-203ENST00000463988 ESRRGP62508 458 aa11.78□□□□□ -0.52
SNRNP40-203ENST00000463988 ACSM1Q08AH1 577 aa11.78□□□□□ -0.52
SNRNP40-203ENST00000463988 ZNF829Q3KNS6 432 aaPredicted RBP11.78□□□□□ -0.52
SNRNP40-203ENST00000463988 THAP5Q7Z6K1 395 aa11.78□□□□□ -0.52
SNRNP40-203ENST00000463988 ZSCAN4Q8NAM6 433 aaPredicted RBP11.78□□□□□ -0.52
SNRNP40-203ENST00000463988 LINC01006Q8NI28 216 aa11.78□□□□□ -0.52
SNRNP40-203ENST00000463988 AQP3Q92482 292 aa11.78□□□□□ -0.52
SNRNP40-203ENST00000463988 SLC7A6OSQ96CW6 309 aaPredicted RBP11.78□□□□□ -0.52
SNRNP40-203ENST00000463988 SDSLQ96GA7 329 aa11.78□□□□□ -0.52
SNRNP40-203ENST00000463988 MNTQ99583 582 aa11.78□□□□□ -0.52
SNRNP40-203ENST00000463988 PRRG3Q9BZD7 231 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms