RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 ZNF555Q8NEP9 628 aa12.82□□□□□ -0.36
VARS-219ENST00000461328 ITFG2Q969R8 447 aa12.82□□□□□ -0.36
VARS-219ENST00000461328 ADI1Q9BV57 179 aa12.82□□□□□ -0.36
VARS-219ENST00000461328 DNAJB11Q9UBS4 358 aa12.82□□□□□ -0.36
VARS-219ENST00000461328 AASSQ9UDR5 926 aa12.82□□□□□ -0.36
VARS-219ENST00000461328 NUP50Q9UKX7 468 aa12.82□□□□□ -0.36
VARS-219ENST00000461328 SLC22A13Q9Y226 551 aa12.82□□□□□ -0.36
VARS-219ENST00000461328 LOC100130705A0A1B0GUX0 176 aa12.81□□□□□ -0.36
VARS-219ENST00000461328 H3BSH0 61 aa12.81□□□□□ -0.36
VARS-219ENST00000461328 NRASP01111 189 aa12.81□□□□□ -0.36
VARS-219ENST00000461328 IGLV3-1P01715 115 aa12.81□□□□□ -0.36
VARS-219ENST00000461328 NPY4RP50391 375 aa12.81□□□□□ -0.36
VARS-219ENST00000461328 ZNF91Q05481 1191 aa12.81□□□□□ -0.36
VARS-219ENST00000461328 CEACAM21Q3KPI0 293 aa12.81□□□□□ -0.36
VARS-219ENST00000461328 DMRTC1Q5HYR2 192 aa12.81□□□□□ -0.36
VARS-219ENST00000461328 SLC25A30Q5SVS4 291 aa12.81□□□□□ -0.36
VARS-219ENST00000461328 TEX36Q5VZQ5 186 aa12.81□□□□□ -0.36
VARS-219ENST00000461328 DOK3Q7L591 496 aa12.81□□□□□ -0.36
VARS-219ENST00000461328 C11orf53Q8IXP5 236 aa12.81□□□□□ -0.36
VARS-219ENST00000461328 ENTHD1Q8IYW4 607 aa12.81□□□□□ -0.36
VARS-219ENST00000461328 SCCPDHQ8NBX0 429 aa12.81□□□□□ -0.36
VARS-219ENST00000461328 RAB40AQ8WXH6 277 aa12.81□□□□□ -0.36
VARS-219ENST00000461328 MRPL48Q96GC5 212 aaKnown RBP12.81□□□□□ -0.36
VARS-219ENST00000461328 Q96MT0 163 aa12.81□□□□□ -0.36
VARS-219ENST00000461328 NUDT16L1Q9BRJ7 211 aaKnown RBP12.81□□□□□ -0.36
VARS-219ENST00000461328 TLNRD1Q9H1K6 362 aa12.81□□□□□ -0.36
VARS-219ENST00000461328 GPR173Q9NS66 373 aa12.81□□□□□ -0.36
VARS-219ENST00000461328 ACOXLQ9NUZ1 547 aa12.81□□□□□ -0.36
VARS-219ENST00000461328 SMPD3Q9NY59 655 aaPredicted RBP12.81□□□□□ -0.36
VARS-219ENST00000461328 CTSZQ9UBR2 303 aa12.81□□□□□ -0.36
VARS-219ENST00000461328 NKX6-3A6NJ46 265 aa12.8□□□□□ -0.36
VARS-219ENST00000461328 OR5B21A6NL26 309 aa12.8□□□□□ -0.36
VARS-219ENST00000461328 HAX1O00165 279 aa12.8□□□□□ -0.36
VARS-219ENST00000461328 TMPRSS2O15393 492 aa12.8□□□□□ -0.36
VARS-219ENST00000461328 AKR7A2O43488 359 aa12.8□□□□□ -0.36
VARS-219ENST00000461328 SYT7O43581 403 aa12.8□□□□□ -0.36
VARS-219ENST00000461328 ENSAO43768 121 aaKnown RBP12.8□□□□□ -0.36
VARS-219ENST00000461328 LHBP01229 141 aa12.8□□□□□ -0.36
VARS-219ENST00000461328 MUC1P15941 1255 aaPredicted RBP12.8□□□□□ -0.36
VARS-219ENST00000461328 PSMB10P40306 273 aa12.8□□□□□ -0.36
VARS-219ENST00000461328 ACTG1P63261 375 aa12.8□□□□□ -0.36
VARS-219ENST00000461328 PAX2Q02962 417 aa12.8□□□□□ -0.36
VARS-219ENST00000461328 ZNF85Q03923 595 aa12.8□□□□□ -0.36
VARS-219ENST00000461328 PAX8Q06710 450 aa12.8□□□□□ -0.36
VARS-219ENST00000461328 RCN1Q15293 331 aa12.8□□□□□ -0.36
VARS-219ENST00000461328 LRRC36Q1X8D7 754 aa12.8□□□□□ -0.36
VARS-219ENST00000461328 CLVS2Q5SYC1 327 aa12.8□□□□□ -0.36
VARS-219ENST00000461328 CD276Q5ZPR3 534 aa12.8□□□□□ -0.36
VARS-219ENST00000461328 RBMS3Q6XE24 437 aaKnown RBP12.8□□□□□ -0.36
VARS-219ENST00000461328 CATSPERDQ86XM0 798 aa12.8□□□□□ -0.36
VARS-219ENST00000461328 OR10Z1Q8NGY1 313 aa12.8□□□□□ -0.36
VARS-219ENST00000461328 RORBQ92753 470 aa12.8□□□□□ -0.36
VARS-219ENST00000461328 FGF23Q9GZV9 251 aaPredicted RBP12.8□□□□□ -0.36
VARS-219ENST00000461328 FAM118AQ9NWS6 357 aa12.8□□□□□ -0.36
VARS-219ENST00000461328 PCDHGB1Q9Y5G3 927 aa12.8□□□□□ -0.36
VARS-219ENST00000461328 FBN3Q75N90 2809 aa12.8□□□□□ -0.36
VARS-219ENST00000461328 A6NIN4 97 aa12.79□□□□□ -0.36
VARS-219ENST00000461328 SRRM5B3KS81 715 aa12.79□□□□□ -0.36
VARS-219ENST00000461328 C22orf46C9J442 243 aa12.79□□□□□ -0.36
VARS-219ENST00000461328 E9PQ18 207 aa12.79□□□□□ -0.36
VARS-219ENST00000461328 DBTP11182 482 aaKnown RBP12.79□□□□□ -0.36
VARS-219ENST00000461328 ACTA2P62736 377 aa12.79□□□□□ -0.36
VARS-219ENST00000461328 ACTG2P63267 376 aa12.79□□□□□ -0.36
VARS-219ENST00000461328 KLF17Q5JT82 389 aaPredicted RBP12.79□□□□□ -0.36
VARS-219ENST00000461328 WDR38Q5JTN6 314 aa12.79□□□□□ -0.36
VARS-219ENST00000461328 HAGHLQ6PII5 290 aaPredicted RBP12.79□□□□□ -0.36
VARS-219ENST00000461328 ZNF841Q6ZN19 808 aa12.79□□□□□ -0.36
VARS-219ENST00000461328 SLC36A1Q7Z2H8 476 aa12.79□□□□□ -0.36
VARS-219ENST00000461328 ACBD7Q8N6N7 88 aa12.79□□□□□ -0.36
VARS-219ENST00000461328 OR5A2Q8NGI9 324 aa12.79□□□□□ -0.36
VARS-219ENST00000461328 FAM216AQ8WUB2 273 aa12.79□□□□□ -0.36
VARS-219ENST00000461328 ST8SIA4Q92187 359 aa12.79□□□□□ -0.36
VARS-219ENST00000461328 SEH1LQ96EE3 360 aa12.79□□□□□ -0.36
VARS-219ENST00000461328 RDH12Q96NR8 316 aa12.79□□□□□ -0.36
VARS-219ENST00000461328 CCL13Q99616 98 aa12.79□□□□□ -0.36
VARS-219ENST00000461328 RASSF4Q9H2L5 321 aa12.79□□□□□ -0.36
VARS-219ENST00000461328 SMURF1Q9HCE7 757 aa12.79□□□□□ -0.36
VARS-219ENST00000461328 SNTG1Q9NSN8 517 aa12.79□□□□□ -0.36
VARS-219ENST00000461328 ZNF69Q9UC07 566 aa12.79□□□□□ -0.36
VARS-219ENST00000461328 V9GYS6 101 aa12.79□□□□□ -0.36
VARS-219ENST00000461328 KIR2DS1A0A191URI9 304 aa12.78□□□□□ -0.36
VARS-219ENST00000461328 A0A1B0GTI1 187 aa12.78□□□□□ -0.36
VARS-219ENST00000461328 LOC107986453A0A1B0GWG9 222 aa12.78□□□□□ -0.36
VARS-219ENST00000461328 DHRS7CA6NNS2 312 aa12.78□□□□□ -0.36
VARS-219ENST00000461328 ANKRD65E5RJM6 399 aa12.78□□□□□ -0.36
VARS-219ENST00000461328 DLGAP1O14490 977 aa12.78□□□□□ -0.36
VARS-219ENST00000461328 DVL1O14640 695 aa12.78□□□□□ -0.36
VARS-219ENST00000461328 SLC16A6O15403 523 aa12.78□□□□□ -0.36
VARS-219ENST00000461328 UBCP0CG48 685 aaKnown RBP12.78□□□□□ -0.36
VARS-219ENST00000461328 PPIAL4GP0DN37 164 aa12.78□□□□□ -0.36
VARS-219ENST00000461328 GABRB1P18505 474 aa12.78□□□□□ -0.36
VARS-219ENST00000461328 GLRA1P23415 457 aa12.78□□□□□ -0.36
VARS-219ENST00000461328 CFHR2P36980 270 aa12.78□□□□□ -0.36
VARS-219ENST00000461328 IKZF1Q13422 519 aa12.78□□□□□ -0.36
VARS-219ENST00000461328 C12orf54Q6X4T0 127 aa12.78□□□□□ -0.36
VARS-219ENST00000461328 FAM216BQ8N7L0 139 aa12.78□□□□□ -0.36
VARS-219ENST00000461328 SIGLECL1Q8N7X8 197 aa12.78□□□□□ -0.36
VARS-219ENST00000461328 OR5T2Q8NGG2 359 aa12.78□□□□□ -0.36
VARS-219ENST00000461328 OR14K1Q8NGZ2 314 aa12.78□□□□□ -0.36
VARS-219ENST00000461328 ZNF671Q8TAW3 534 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms