RNA–Protein interactions for RNA: ENST00000461041.1

SNAPC3-204, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 2

Gene SNAPC3, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-204ENST00000461041 FBLIM1Q8WUP2 373 aa16.79■□□□□ 0.28
SNAPC3-204ENST00000461041 LRRC29Q8WV35 223 aa16.79■□□□□ 0.28
SNAPC3-204ENST00000461041 RPL3LQ92901 407 aaKnown RBP16.79■□□□□ 0.28
SNAPC3-204ENST00000461041 HIF1ANQ9NWT6 349 aa16.79■□□□□ 0.28
SNAPC3-204ENST00000461041 TRAV20A0A0B4J274 112 aa16.78■□□□□ 0.28
SNAPC3-204ENST00000461041 ZNF732B4DXR9 585 aa16.78■□□□□ 0.28
SNAPC3-204ENST00000461041 LGALS8O00214 317 aa16.78■□□□□ 0.28
SNAPC3-204ENST00000461041 WNT2P09544 360 aa16.78■□□□□ 0.28
SNAPC3-204ENST00000461041 EGR1P18146 543 aa16.78■□□□□ 0.28
SNAPC3-204ENST00000461041 ETV1P50549 477 aa16.78■□□□□ 0.28
SNAPC3-204ENST00000461041 SEC61A1P61619 476 aaKnown RBP16.78■□□□□ 0.28
SNAPC3-204ENST00000461041 RIPK1Q13546 671 aa16.78■□□□□ 0.28
SNAPC3-204ENST00000461041 ALKBH1Q13686 389 aaKnown RBP16.78■□□□□ 0.28
SNAPC3-204ENST00000461041 CR1LQ2VPA4 569 aa16.78■□□□□ 0.28
SNAPC3-204ENST00000461041 SFRP4Q6FHJ7 346 aaPredicted RBP16.78■□□□□ 0.28
SNAPC3-204ENST00000461041 SCCPDHQ8NBX0 429 aa16.78■□□□□ 0.28
SNAPC3-204ENST00000461041 POM121Q96HA1 1249 aa16.78■□□□□ 0.28
SNAPC3-204ENST00000461041 VCX3BQ9H321 246 aa16.78■□□□□ 0.28
SNAPC3-204ENST00000461041 PLEKHA1Q9HB21 404 aa16.78■□□□□ 0.28
SNAPC3-204ENST00000461041 GPR173Q9NS66 373 aa16.78■□□□□ 0.28
SNAPC3-204ENST00000461041 MIOXQ9UGB7 285 aa16.78■□□□□ 0.28
SNAPC3-204ENST00000461041 DIMT1Q9UNQ2 313 aaKnown RBP16.78■□□□□ 0.28
SNAPC3-204ENST00000461041 NF1P21359 2839 aa16.78■□□□□ 0.28
SNAPC3-204ENST00000461041 SETD2Q9BYW2 2564 aaPredicted RBP16.77■□□□□ 0.28
SNAPC3-204ENST00000461041 OOEPA6NGQ2 149 aa16.77■□□□□ 0.28
SNAPC3-204ENST00000461041 OR5B21A6NL26 309 aa16.77■□□□□ 0.28
SNAPC3-204ENST00000461041 OR4C45A6NMZ5 311 aa16.77■□□□□ 0.28
SNAPC3-204ENST00000461041 C3orf80F5H4A9 247 aa16.77■□□□□ 0.28
SNAPC3-204ENST00000461041 ATP6V1G2O95670 118 aa16.77■□□□□ 0.28
SNAPC3-204ENST00000461041 ISG15P05161 165 aa16.77■□□□□ 0.28
SNAPC3-204ENST00000461041 RPS2P15880 293 aaKnown RBP16.77■□□□□ 0.28
SNAPC3-204ENST00000461041 CFHR2P36980 270 aa16.77■□□□□ 0.28
SNAPC3-204ENST00000461041 LCN2P80188 198 aa16.77■□□□□ 0.28
SNAPC3-204ENST00000461041 MRPL28Q13084 256 aaKnown RBP16.77■□□□□ 0.28
SNAPC3-204ENST00000461041 FAM120AOSQ5T036 256 aa16.77■□□□□ 0.28
SNAPC3-204ENST00000461041 DCDC5Q6ZRR9 648 aa16.77■□□□□ 0.28
SNAPC3-204ENST00000461041 GGHQ92820 318 aa16.77■□□□□ 0.28
SNAPC3-204ENST00000461041 SHARPINQ9H0F6 387 aa16.77■□□□□ 0.28
SNAPC3-204ENST00000461041 OR51I2Q9H344 312 aa16.77■□□□□ 0.28
SNAPC3-204ENST00000461041 LPAR3Q9UBY5 353 aa16.77■□□□□ 0.28
SNAPC3-204ENST00000461041 CDC42EP3Q9UKI2 254 aa16.77■□□□□ 0.28
SNAPC3-204ENST00000461041 TRAV38-1A0A0B4J264 116 aa16.76■□□□□ 0.27
SNAPC3-204ENST00000461041 E9PI62 339 aa16.76■□□□□ 0.27
SNAPC3-204ENST00000461041 XPNPEP2O43895 674 aa16.76■□□□□ 0.27
SNAPC3-204ENST00000461041 FOXH1O75593 365 aa16.76■□□□□ 0.27
SNAPC3-204ENST00000461041 ZNF12P17014 697 aa16.76■□□□□ 0.27
SNAPC3-204ENST00000461041 PCMT1P22061 227 aa16.76■□□□□ 0.27
SNAPC3-204ENST00000461041 CPT2P23786 658 aa16.76■□□□□ 0.27
SNAPC3-204ENST00000461041 ZFP36P26651 326 aaKnown RBP16.76■□□□□ 0.27
SNAPC3-204ENST00000461041 GBX2P52951 348 aaPredicted RBP16.76■□□□□ 0.27
SNAPC3-204ENST00000461041 KCNJ8Q15842 424 aa16.76■□□□□ 0.27
SNAPC3-204ENST00000461041 CHRFAM7AQ494W8 412 aa16.76■□□□□ 0.27
SNAPC3-204ENST00000461041 ESCO2Q56NI9 601 aa16.76■□□□□ 0.27
SNAPC3-204ENST00000461041 LYPD2Q6UXB3 125 aa16.76■□□□□ 0.27
SNAPC3-204ENST00000461041 NEIL1Q96FI4 390 aaPredicted RBP16.76■□□□□ 0.27
SNAPC3-204ENST00000461041 TMEM80Q96HE8 168 aa16.76■□□□□ 0.27
SNAPC3-204ENST00000461041 BEX2Q9BXY8 128 aa16.76■□□□□ 0.27
SNAPC3-204ENST00000461041 TRIM36Q9NQ86 728 aa16.76■□□□□ 0.27
SNAPC3-204ENST00000461041 PLCXD1Q9NUJ7 323 aa16.76■□□□□ 0.27
SNAPC3-204ENST00000461041 CAB39Q9Y376 341 aaPredicted RBP16.76■□□□□ 0.27
SNAPC3-204ENST00000461041 EXOSC1Q9Y3B2 195 aaKnown RBP16.76■□□□□ 0.27
SNAPC3-204ENST00000461041 EFCAB10A6NFE3 127 aa16.75■□□□□ 0.27
SNAPC3-204ENST00000461041 ANKRD61A6NGH8 418 aa16.75■□□□□ 0.27
SNAPC3-204ENST00000461041 SRRM5B3KS81 715 aa16.75■□□□□ 0.27
SNAPC3-204ENST00000461041 PIPP12273 146 aaPredicted RBP16.75■□□□□ 0.27
SNAPC3-204ENST00000461041 MYL12AP19105 171 aa16.75■□□□□ 0.27
SNAPC3-204ENST00000461041 ST3GAL4Q11206 333 aa16.75■□□□□ 0.27
SNAPC3-204ENST00000461041 TEX36Q5VZQ5 186 aa16.75■□□□□ 0.27
SNAPC3-204ENST00000461041 IL17RELQ6ZVW7 336 aa16.75■□□□□ 0.27
SNAPC3-204ENST00000461041 ZNF676Q8N7Q3 588 aa16.75■□□□□ 0.27
SNAPC3-204ENST00000461041 BPIFB6Q8NFQ5 453 aa16.75■□□□□ 0.27
SNAPC3-204ENST00000461041 OR10Z1Q8NGY1 313 aa16.75■□□□□ 0.27
SNAPC3-204ENST00000461041 CNOT2Q9NZN8 540 aaKnown RBP16.75■□□□□ 0.27
SNAPC3-204ENST00000461041 PSORS1C1Q9UIG5 152 aa16.75■□□□□ 0.27
SNAPC3-204ENST00000461041 LRCH1Q9Y2L9 728 aa16.75■□□□□ 0.27
SNAPC3-204ENST00000461041 SONP18583 2426 aaKnown RBP16.74■□□□□ 0.27
SNAPC3-204ENST00000461041 IGHV3OR15-7A0A075B7D8 119 aa16.74■□□□□ 0.27
SNAPC3-204ENST00000461041 KIAA1324LA8MWY0 1029 aaPredicted RBP16.74■□□□□ 0.27
SNAPC3-204ENST00000461041 A8MXK9 166 aa16.74■□□□□ 0.27
SNAPC3-204ENST00000461041 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.74■□□□□ 0.27
SNAPC3-204ENST00000461041 TNFRSF13BO14836 293 aaPredicted RBP16.74■□□□□ 0.27
SNAPC3-204ENST00000461041 PHF1O43189 567 aaPredicted RBP16.74■□□□□ 0.27
SNAPC3-204ENST00000461041 HNF1AP20823 631 aa16.74■□□□□ 0.27
SNAPC3-204ENST00000461041 TGM4P49221 684 aa16.74■□□□□ 0.27
SNAPC3-204ENST00000461041 OR2G6Q5TZ20 316 aa16.74■□□□□ 0.27
SNAPC3-204ENST00000461041 TMPRSS11AQ6ZMR5 421 aa16.74■□□□□ 0.27
SNAPC3-204ENST00000461041 NLRC3Q7RTR2 1065 aa16.74■□□□□ 0.27
SNAPC3-204ENST00000461041 FAM90A1Q86YD7 464 aa16.74■□□□□ 0.27
SNAPC3-204ENST00000461041 OR8B3Q8NGG8 313 aa16.74■□□□□ 0.27
SNAPC3-204ENST00000461041 OR10AC1Q8NH08 325 aa16.74■□□□□ 0.27
SNAPC3-204ENST00000461041 HAVCR2Q8TDQ0 301 aa16.74■□□□□ 0.27
SNAPC3-204ENST00000461041 C10orf35Q96D05 121 aa16.74■□□□□ 0.27
SNAPC3-204ENST00000461041 OR8B2Q96RD0 313 aa16.74■□□□□ 0.27
SNAPC3-204ENST00000461041 SSBP3Q9BWW4 388 aaPredicted RBP16.74■□□□□ 0.27
SNAPC3-204ENST00000461041 CHST5Q9GZS9 411 aa16.74■□□□□ 0.27
SNAPC3-204ENST00000461041 CLEC2DQ9UHP7 191 aa16.74■□□□□ 0.27
SNAPC3-204ENST00000461041 HHLA2Q9UM44 414 aa16.74■□□□□ 0.27
SNAPC3-204ENST00000461041 POLR3KQ9Y2Y1 108 aaPredicted RBP16.74■□□□□ 0.27
SNAPC3-204ENST00000461041 NIPBLQ6KC79 2804 aaeCLIP16.74■□□□□ 0.27
SNAPC3-204ENST00000461041 PQLC2LA1A4F0 135 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms