RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 ARV1Q9H2C2 271 aa5.4□□□□□ -1.54
UBQLN4-202ENST00000459954 C5orf66Q9H5L9 145 aa5.4□□□□□ -1.54
UBQLN4-202ENST00000459954 PTGES2Q9H7Z7 377 aa5.4□□□□□ -1.54
UBQLN4-202ENST00000459954 ZMAT3Q9HA38 289 aaKnown RBP5.4□□□□□ -1.54
UBQLN4-202ENST00000459954 FN3KRPQ9HA64 309 aa5.4□□□□□ -1.54
UBQLN4-202ENST00000459954 PLEKHA2Q9HB19 425 aa5.4□□□□□ -1.54
UBQLN4-202ENST00000459954 PNRC2Q9NPJ4 139 aaKnown RBP5.4□□□□□ -1.54
UBQLN4-202ENST00000459954 BIN3Q9NQY0 253 aa5.4□□□□□ -1.54
UBQLN4-202ENST00000459954 PARP11Q9NR21 331 aa5.4□□□□□ -1.54
UBQLN4-202ENST00000459954 FGF21Q9NSA1 209 aa5.4□□□□□ -1.54
UBQLN4-202ENST00000459954 UQCC1Q9NVA1 299 aa5.4□□□□□ -1.54
UBQLN4-202ENST00000459954 C1orf123Q9NWV4 160 aa5.4□□□□□ -1.54
UBQLN4-202ENST00000459954 MED29Q9NX70 200 aa5.4□□□□□ -1.54
UBQLN4-202ENST00000459954 SLC39A1Q9NY26 324 aa5.4□□□□□ -1.54
UBQLN4-202ENST00000459954 ASH2LQ9UBL3 628 aa5.4□□□□□ -1.54
UBQLN4-202ENST00000459954 TUBD1Q9UJT1 453 aa5.4□□□□□ -1.54
UBQLN4-202ENST00000459954 HSF4Q9ULV5 492 aa5.4□□□□□ -1.54
UBQLN4-202ENST00000459954 CEP250Q9BV73 2442 aa5.4□□□□□ -1.55
UBQLN4-202ENST00000459954 DMDP11532 3685 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 A0A0A6YYD4 124 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 C13orf42A0A1B0GVH6 325 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 FAM74A7A6NL05 159 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 F8W036 122 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 H0YIZ8 118 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 SOCS1O15524 211 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 DNPH1O43598 174 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 EFNA2O43921 213 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 FBXO24O75426 580 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 DHRS3O75911 302 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 DKK1O94907 266 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 PLATP00750 562 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 CD5P06127 495 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 CTSDP07339 412 aaPredicted RBP5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 HEXBP07686 556 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 ZNF17P17021 662 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 AMY2BP19961 511 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 PVALBP20472 110 aaPredicted RBP5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 CPT2P23786 658 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 DTYMKP23919 212 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 EPHA8P29322 1005 aaPredicted RBP5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 PTGFRP43088 359 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 SUCLG1P53597 346 aaKnown RBP5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 UCP2P55851 309 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 FBXW4P57775 412 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 OR1D5P58170 312 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 ZNF121P58317 390 aaPredicted RBP5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 CTAG1AP78358 180 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 MYBPHQ13203 477 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 ARFRP1Q13795 201 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 DEFB133Q30KQ1 61 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 RNF212Q495C1 297 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 LRRC37A5PQ49AS3 106 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 FAM74A3Q4VXF1 159 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 GPR157Q5UAW9 335 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 AADACL3Q5VUY0 350 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 TMEM71Q6P5X7 295 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 BTNL8Q6UX41 500 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 ASCL4Q6XD76 172 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 LANCL3Q6ZV70 420 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 ABHD12BQ7Z5M8 362 aaPredicted RBP5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 LDLRAD3Q86YD5 345 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 DEFB119Q8N690 84 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 LRTM2Q8N967 370 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 FADS6Q8N9I5 356 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 GJC3Q8NFK1 279 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 OR2M3Q8NG83 312 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 POC1BQ8TC44 478 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 SLC22A8Q8TCC7 542 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 SLC39A7Q92504 469 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 HAS2Q92819 552 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 TMEM54Q969K7 222 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 NTNG2Q96CW9 530 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 TMEM41AQ96HV5 264 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 PECRQ9BY49 303 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 CNTNAP3Q9BZ76 1288 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 EGLN1Q9GZT9 426 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 SMDT1Q9H4I9 107 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 TUBA4BQ9H853 241 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 RNF122Q9H9V4 155 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 PARD6AQ9NPB6 346 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 GPR84Q9NQS5 396 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 PLSCR2Q9NRY7 297 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 ASF1BQ9NVP2 202 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 C19orf25Q9UFG5 118 aaPredicted RBP5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 ZNF391Q9UJN7 358 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 C14orf166Q9Y224 244 aaKnown RBP5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 POLR1DQ9Y2S0 133 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 SLCO1B1Q9Y6L6 691 aa5.39□□□□□ -1.55
UBQLN4-202ENST00000459954 CNOT1A5YKK6 2376 aaKnown RBP5.38□□□□□ -1.55
UBQLN4-202ENST00000459954 TNRC6AQ8NDV7 1962 aaKnown RBP5.38□□□□□ -1.55
UBQLN4-202ENST00000459954 SPTBN4Q9H254 2564 aa5.38□□□□□ -1.55
UBQLN4-202ENST00000459954 PCNX2A6NKB5 2137 aa5.38□□□□□ -1.55
UBQLN4-202ENST00000459954 KNTC1P50748 2209 aa5.38□□□□□ -1.55
UBQLN4-202ENST00000459954 LOC101059948A0A1B0GTJ6 334 aa5.38□□□□□ -1.55
UBQLN4-202ENST00000459954 TMEM238LA0A1B0GVL6 79 aa5.38□□□□□ -1.55
UBQLN4-202ENST00000459954 A0A1B0GW64 132 aa5.38□□□□□ -1.55
UBQLN4-202ENST00000459954 CRYM-AS1A6NIL9 109 aa5.38□□□□□ -1.55
UBQLN4-202ENST00000459954 ZNF726A6NNF4 738 aa5.38□□□□□ -1.55
UBQLN4-202ENST00000459954 C17orf51A8MQB3 221 aa5.38□□□□□ -1.55
UBQLN4-202ENST00000459954 ZNF705EA8MWA4 302 aaPredicted RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms