RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 ADAD2Q8NCV1 583 aaKnown RBP7.77□□□□□ -1.17
HDAC3-202ENST00000459727 TMEM104Q8NE00 496 aa7.77□□□□□ -1.17
HDAC3-202ENST00000459727 MR1Q95460 341 aa7.77□□□□□ -1.17
HDAC3-202ENST00000459727 NABP1Q96AH0 204 aa7.77□□□□□ -1.17
HDAC3-202ENST00000459727 ARHGAP5-AS1Q96IT6 56 aa7.77□□□□□ -1.17
HDAC3-202ENST00000459727 AIFM2Q9BRQ8 373 aa7.77□□□□□ -1.17
HDAC3-202ENST00000459727 ZPBPQ9BS86 351 aa7.77□□□□□ -1.17
HDAC3-202ENST00000459727 PECRQ9BY49 303 aa7.77□□□□□ -1.17
HDAC3-202ENST00000459727 FAM117AQ9C073 453 aa7.77□□□□□ -1.17
HDAC3-202ENST00000459727 C5orf66Q9H5L9 145 aa7.77□□□□□ -1.17
HDAC3-202ENST00000459727 METTL8Q9H825 291 aaKnown RBP7.77□□□□□ -1.17
HDAC3-202ENST00000459727 BARX1Q9HBU1 254 aaPredicted RBP7.77□□□□□ -1.17
HDAC3-202ENST00000459727 C12orf4Q9NQ89 552 aa7.77□□□□□ -1.17
HDAC3-202ENST00000459727 MMP26Q9NRE1 261 aa7.77□□□□□ -1.17
HDAC3-202ENST00000459727 DECR2Q9NUI1 292 aa7.77□□□□□ -1.17
HDAC3-202ENST00000459727 NECAP2Q9NVZ3 263 aa7.77□□□□□ -1.17
HDAC3-202ENST00000459727 PLEK2Q9NYT0 353 aa7.77□□□□□ -1.17
HDAC3-202ENST00000459727 KCNIP3Q9Y2W7 256 aa7.77□□□□□ -1.17
HDAC3-202ENST00000459727 PTRH2Q9Y3E5 179 aaKnown RBP7.77□□□□□ -1.17
HDAC3-202ENST00000459727 CFAP54Q96N23 3096 aa7.76□□□□□ -1.17
HDAC3-202ENST00000459727 LOC100509620A0A075B734 347 aa7.76□□□□□ -1.17
HDAC3-202ENST00000459727 A0A0A6YYD4 124 aa7.76□□□□□ -1.17
HDAC3-202ENST00000459727 IGKV1-9A0A0C4DH69 117 aa7.76□□□□□ -1.17
HDAC3-202ENST00000459727 F5H5K5 113 aa7.76□□□□□ -1.17
HDAC3-202ENST00000459727 STMND1H3BQB6 276 aa7.76□□□□□ -1.17
HDAC3-202ENST00000459727 NTN3O00634 580 aaPredicted RBP7.76□□□□□ -1.17
HDAC3-202ENST00000459727 CDK2AP1O14519 115 aa7.76□□□□□ -1.17
HDAC3-202ENST00000459727 CCSO14618 274 aa7.76□□□□□ -1.17
HDAC3-202ENST00000459727 XRCC2O43543 280 aa7.76□□□□□ -1.17
HDAC3-202ENST00000459727 SGCEO43556 437 aa7.76□□□□□ -1.17
HDAC3-202ENST00000459727 GAPDHP04406 335 aaKnown RBP7.76□□□□□ -1.17
HDAC3-202ENST00000459727 SERPINA5P05154 406 aa7.76□□□□□ -1.17
HDAC3-202ENST00000459727 HPNP05981 417 aa7.76□□□□□ -1.17
HDAC3-202ENST00000459727 FCGR2AP12318 317 aa7.76□□□□□ -1.17
HDAC3-202ENST00000459727 ATF4P18848 351 aaPredicted RBP7.76□□□□□ -1.17
HDAC3-202ENST00000459727 AVPR2P30518 371 aa7.76□□□□□ -1.17
HDAC3-202ENST00000459727 NPY4RP50391 375 aa7.76□□□□□ -1.17
HDAC3-202ENST00000459727 TMEM50BP56557 158 aa7.76□□□□□ -1.17
HDAC3-202ENST00000459727 BLOC1S1P78537 153 aa7.76□□□□□ -1.17
HDAC3-202ENST00000459727 ZFP36L1Q07352 338 aaKnown RBP7.76□□□□□ -1.17
HDAC3-202ENST00000459727 CHAF1BQ13112 559 aa7.76□□□□□ -1.17
HDAC3-202ENST00000459727 PRAMEF20Q5VT98 475 aa7.76□□□□□ -1.17
HDAC3-202ENST00000459727 CLEC18BQ6UXF7 455 aa7.76□□□□□ -1.17
HDAC3-202ENST00000459727 GALNTL5Q7Z4T8 443 aa7.76□□□□□ -1.17
HDAC3-202ENST00000459727 GLRX5Q86SX6 157 aa7.76□□□□□ -1.17
HDAC3-202ENST00000459727 WDFY1Q8IWB7 410 aa7.76□□□□□ -1.17
HDAC3-202ENST00000459727 SLC38A6Q8IZM9 456 aa7.76□□□□□ -1.17
HDAC3-202ENST00000459727 FAM185AQ8N0U4 392 aa7.76□□□□□ -1.17
HDAC3-202ENST00000459727 FNDC9Q8TBE3 224 aa7.76□□□□□ -1.17
HDAC3-202ENST00000459727 PCNPQ8WW12 178 aaKnown RBP7.76□□□□□ -1.17
HDAC3-202ENST00000459727 SEC22AQ96IW7 307 aa7.76□□□□□ -1.17
HDAC3-202ENST00000459727 Q96M66 194 aa7.76□□□□□ -1.17
HDAC3-202ENST00000459727 NKX3-1Q99801 234 aaPredicted RBP7.76□□□□□ -1.17
HDAC3-202ENST00000459727 SYT3Q9BQG1 590 aa7.76□□□□□ -1.17
HDAC3-202ENST00000459727 NICN1Q9BSH3 213 aa7.76□□□□□ -1.17
HDAC3-202ENST00000459727 BANF2Q9H503 90 aa7.76□□□□□ -1.17
HDAC3-202ENST00000459727 PLEKHA2Q9HB19 425 aa7.76□□□□□ -1.17
HDAC3-202ENST00000459727 PLEKHJ1Q9NW61 149 aa7.76□□□□□ -1.17
HDAC3-202ENST00000459727 ZNF230Q9UIE0 474 aaPredicted RBP7.76□□□□□ -1.17
HDAC3-202ENST00000459727 GPR160Q9UJ42 338 aa7.76□□□□□ -1.17
HDAC3-202ENST00000459727 SLC7A11Q9UPY5 501 aa7.76□□□□□ -1.17
HDAC3-202ENST00000459727 PIGLQ9Y2B2 252 aa7.76□□□□□ -1.17
HDAC3-202ENST00000459727 TP53BP1Q12888 1972 aaPredicted RBP7.75□□□□□ -1.17
HDAC3-202ENST00000459727 FAM90A10PA6NDY2 464 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 FAM90A18PA6NE21 464 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 FAM90A16PA6NEW6 464 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 FAM90A20PA6NIJ5 464 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 FAM90A8PA6NJQ4 464 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 FAM90A7PA6NKC0 464 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 FAM90A22PA8MWA6 464 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 FAM90A12PA8MX19 464 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 FAM90A5PA8MXJ8 464 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 FAM90A23PA8MXZ1 464 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 ABCD4O14678 606 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 TSPAN4O14817 238 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 SCO1O75880 301 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 JTBO76095 146 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 FARS2O95363 451 aaKnown RBP7.75□□□□□ -1.17
HDAC3-202ENST00000459727 APOC3P02656 99 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 UMODP07911 640 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 FAM90A15PP0C7V4 464 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 FAM90A13PP0C7W8 464 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 FAM90A14PP0C7W9 464 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 FAM90A24PP0C7X0 464 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 SLC2A1P11166 492 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 MYF5P13349 255 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 CTRB1P17538 263 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 SERPINA2P20848 420 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 CRYGSP22914 178 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 RBP2P50120 134 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 BTN1A1Q13410 526 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 ATXN7L3Q14CW9 347 aaPredicted RBP7.75□□□□□ -1.17
HDAC3-202ENST00000459727 RSU1Q15404 277 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 AADACL3Q5VUY0 350 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 CTRB2Q6GPI1 263 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 ASCL4Q6XD76 172 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 COMMD1Q8N668 190 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.75□□□□□ -1.17
HDAC3-202ENST00000459727 CCDC71LQ8N9Z2 235 aa7.75□□□□□ -1.17
HDAC3-202ENST00000459727 ZSCAN4Q8NAM6 433 aaPredicted RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms