RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 VTNP04004 478 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 CD37P11049 281 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 HOXB2P14652 356 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 ENGP17813 658 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 WT1P19544 449 aaPredicted RBP4.67□□□□□ -1.66
VPS41-209ENST00000457055 TBPP20226 339 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 IL12AP29459 219 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 MDH2P40926 338 aaKnown RBP4.67□□□□□ -1.66
VPS41-209ENST00000457055 BDKRB1P46663 353 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 GSK3BP49841 420 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 CRISP1P54107 249 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 OR10A3P58181 314 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 RAB8AP61006 207 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 RHOBP62745 196 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 TFF2Q03403 129 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 SRYQ05066 204 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 ZNF155Q12901 538 aaPredicted RBP4.67□□□□□ -1.66
VPS41-209ENST00000457055 MFAP5Q13361 173 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 UBE2V1Q13404 147 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 LTC4SQ16873 150 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 SNAI3Q3KNW1 292 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 SCGB2B2Q4G0G5 96 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 CYBRD1Q53TN4 286 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 CLEC12AQ5QGZ9 265 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 HIST2H3PS2Q5TEC6 136 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 HIST2H2BCQ6DN03 193 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 HIST2H2BDQ6DRA6 164 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 RTL6Q6ICC9 239 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 ZNF474Q6S9Z5 364 aaPredicted RBP4.67□□□□□ -1.66
VPS41-209ENST00000457055 UGT2A3Q6UWM9 527 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 PAMR1Q6UXH9 720 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 MBOAT2Q6ZWT7 520 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 MAVSQ7Z434 540 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 GLT6D1Q7Z4J2 308 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 DEFB128Q7Z7B8 93 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 ZNF676Q8N7Q3 588 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 OR52B6Q8NGF0 335 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 OR4D11Q8NGI4 311 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 OR6T1Q8NGN1 323 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 OR10G9Q8NGN4 311 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 OR5B3Q8NH48 314 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 ZNF420Q8TAQ5 688 aaPredicted RBP4.67□□□□□ -1.66
VPS41-209ENST00000457055 SLC38A5Q8WUX1 472 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 ART4Q93070 314 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 NEIL2Q969S2 332 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 GALMQ96C23 342 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 ZC3HAV1LQ96H79 300 aaKnown RBP4.67□□□□□ -1.66
VPS41-209ENST00000457055 GRAMD2BQ96HH9 432 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 FCRL1Q96LA6 429 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 ZNF347Q96SE7 839 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 P2RX4Q99571 388 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 VKORC1Q9BQB6 163 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 SULT4A1Q9BR01 284 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 PRRG4Q9BZD6 226 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 PTGES2Q9H7Z7 377 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 RETNQ9HD89 108 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 SLC7A10Q9NS82 523 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 FAM206AQ9NX38 181 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 IL36GQ9NZH8 169 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 FLRT1Q9NZU1 646 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 RCC2Q9P258 522 aaKnown RBP4.67□□□□□ -1.66
VPS41-209ENST00000457055 THAP10Q9P2Z0 257 aaPredicted RBP4.67□□□□□ -1.66
VPS41-209ENST00000457055 UBQLN1Q9UMX0 589 aaKnown RBP4.67□□□□□ -1.66
VPS41-209ENST00000457055 AK6Q9Y3D8 172 aaKnown RBP4.67□□□□□ -1.66
VPS41-209ENST00000457055 RPL36Q9Y3U8 105 aaKnown RBP4.67□□□□□ -1.66
VPS41-209ENST00000457055 SNX10Q9Y5X0 201 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 A3GALT2U3KPV4 340 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 V9GYS6 101 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 LTBP2Q14767 1821 aa4.67□□□□□ -1.66
VPS41-209ENST00000457055 USP34Q70CQ2 3546 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 MEIKINA0A087WXM9 373 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 NSG1A0A0A6YYJ2 146 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 TRAV24A0A0B4J272 114 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 CCL15-CCL14A0A0B4J2E2 113 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 PRAMEF33A0A0G2JMD5 474 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 A0A1W2PPK0 400 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 CIB4A0PJX0 185 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 CXorf65A6NEN9 183 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 DHRS7CA6NNS2 312 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 A8MWP6 167 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 C17orf105B2RV13 164 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 H0YL77 283 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 SYT7O43581 403 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 EIF4E2O60573 245 aaKnown RBP4.66□□□□□ -1.66
VPS41-209ENST00000457055 PRAMEF10O60809 474 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 ALOX12BO75342 701 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 MPDU1O75352 247 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 CDS2O95674 445 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 EML2O95834 649 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 IFNA7P01567 189 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 UBBP0CG47 229 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 CT45A8P0DMV1 189 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 CT45A9P0DMV2 189 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 TAC1P20366 129 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 FGF7P21781 194 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 CBLP22681 906 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 CERS1P27544 350 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 GRPRP30550 384 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 NSG1P42857 185 aa4.66□□□□□ -1.66
VPS41-209ENST00000457055 ZNF134P52741 427 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms