RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 GRPP07492 148 aa11.89□□□□□ -0.51
SMPD4-215ENST00000457039 FOSL1P15407 271 aa11.89□□□□□ -0.51
SMPD4-215ENST00000457039 BDH1Q02338 343 aa11.89□□□□□ -0.51
SMPD4-215ENST00000457039 UBE2V2Q15819 145 aa11.89□□□□□ -0.51
SMPD4-215ENST00000457039 DMRTC1Q5HYR2 192 aa11.89□□□□□ -0.51
SMPD4-215ENST00000457039 AVPI1Q5T686 147 aa11.89□□□□□ -0.51
SMPD4-215ENST00000457039 PLCXD3Q63HM9 321 aa11.89□□□□□ -0.51
SMPD4-215ENST00000457039 ZFP41Q8N8Y5 198 aa11.89□□□□□ -0.51
SMPD4-215ENST00000457039 MAPK1IP1LQ8NDC0 245 aa11.89□□□□□ -0.51
SMPD4-215ENST00000457039 OR5A2Q8NGI9 324 aa11.89□□□□□ -0.51
SMPD4-215ENST00000457039 GHSRQ92847 366 aa11.89□□□□□ -0.51
SMPD4-215ENST00000457039 HIST1H2AAQ96QV6 131 aa11.89□□□□□ -0.51
SMPD4-215ENST00000457039 FN3KRPQ9HA64 309 aa11.89□□□□□ -0.51
SMPD4-215ENST00000457039 LRRC42Q9Y546 428 aa11.89□□□□□ -0.51
SMPD4-215ENST00000457039 CR1P17927 2039 aa11.89□□□□□ -0.51
SMPD4-215ENST00000457039 F8P00451 2351 aa11.89□□□□□ -0.51
SMPD4-215ENST00000457039 ZNF732B4DXR9 585 aa11.88□□□□□ -0.51
SMPD4-215ENST00000457039 PLPP2O43688 288 aa11.88□□□□□ -0.51
SMPD4-215ENST00000457039 MRPS14O60783 128 aaKnown RBP11.88□□□□□ -0.51
SMPD4-215ENST00000457039 FSTL3O95633 263 aa11.88□□□□□ -0.51
SMPD4-215ENST00000457039 CYB5R3P00387 301 aaPredicted RBP11.88□□□□□ -0.51
SMPD4-215ENST00000457039 GPM6AP51674 278 aa11.88□□□□□ -0.51
SMPD4-215ENST00000457039 RPS11P62280 158 aaKnown RBP eCLIP11.88□□□□□ -0.51
SMPD4-215ENST00000457039 GNG3P63215 75 aa11.88□□□□□ -0.51
SMPD4-215ENST00000457039 SPHARQ15513 63 aa11.88□□□□□ -0.51
SMPD4-215ENST00000457039 ZNF826PQ6ZT77 177 aa11.88□□□□□ -0.51
SMPD4-215ENST00000457039 UTS2BQ765I0 119 aa11.88□□□□□ -0.51
SMPD4-215ENST00000457039 PARP16Q8N5Y8 322 aa11.88□□□□□ -0.51
SMPD4-215ENST00000457039 OR13C3Q8NGS6 347 aa11.88□□□□□ -0.51
SMPD4-215ENST00000457039 PP6455Q8WZ26 134 aa11.88□□□□□ -0.51
SMPD4-215ENST00000457039 HPS1Q92902 700 aa11.88□□□□□ -0.51
SMPD4-215ENST00000457039 RAB1CQ92928 201 aa11.88□□□□□ -0.51
SMPD4-215ENST00000457039 FGGYQ96C11 551 aa11.88□□□□□ -0.51
SMPD4-215ENST00000457039 TIMD4Q96H15 378 aa11.88□□□□□ -0.51
SMPD4-215ENST00000457039 TECTBQ96PL2 329 aa11.88□□□□□ -0.51
SMPD4-215ENST00000457039 OR51I2Q9H344 312 aa11.88□□□□□ -0.51
SMPD4-215ENST00000457039 C1orf123Q9NWV4 160 aa11.88□□□□□ -0.51
SMPD4-215ENST00000457039 ZNF281Q9Y2X9 895 aa11.88□□□□□ -0.51
SMPD4-215ENST00000457039 IGKV1-9A0A0C4DH69 117 aa11.87□□□□□ -0.51
SMPD4-215ENST00000457039 TRBV5-5A0A0J9YX44 114 aa11.87□□□□□ -0.51
SMPD4-215ENST00000457039 PQLC2LA1A4F0 135 aa11.87□□□□□ -0.51
SMPD4-215ENST00000457039 LRP5LA4QPB2 252 aa11.87□□□□□ -0.51
SMPD4-215ENST00000457039 A6NLC8 198 aa11.87□□□□□ -0.51
SMPD4-215ENST00000457039 LRRC30A6NM36 301 aa11.87□□□□□ -0.51
SMPD4-215ENST00000457039 CDIPTO14735 213 aa11.87□□□□□ -0.51
SMPD4-215ENST00000457039 SMAD7O15105 426 aaKnown RBP11.87□□□□□ -0.51
SMPD4-215ENST00000457039 GATBO75879 557 aaKnown RBP11.87□□□□□ -0.51
SMPD4-215ENST00000457039 LHBP01229 141 aa11.87□□□□□ -0.51
SMPD4-215ENST00000457039 INHBBP09529 407 aa11.87□□□□□ -0.51
SMPD4-215ENST00000457039 CFHR2P36980 270 aa11.87□□□□□ -0.51
SMPD4-215ENST00000457039 MAP2K4P45985 399 aa11.87□□□□□ -0.51
SMPD4-215ENST00000457039 BTG1P62324 171 aa11.87□□□□□ -0.51
SMPD4-215ENST00000457039 HOXA4Q00056 320 aaPredicted RBP11.87□□□□□ -0.51
SMPD4-215ENST00000457039 KRTAP1-1Q07627 177 aa11.87□□□□□ -0.51
SMPD4-215ENST00000457039 ZMYND11Q15326 602 aa11.87□□□□□ -0.51
SMPD4-215ENST00000457039 TBCEQ15813 527 aaPredicted RBP11.87□□□□□ -0.51
SMPD4-215ENST00000457039 YIF1BQ5BJH7 314 aa11.87□□□□□ -0.51
SMPD4-215ENST00000457039 ASPHD2Q6ICH7 369 aa11.87□□□□□ -0.51
SMPD4-215ENST00000457039 WDR82Q6UXN9 313 aa11.87□□□□□ -0.51
SMPD4-215ENST00000457039 PEG10Q86TG7 708 aaKnown RBP11.87□□□□□ -0.51
SMPD4-215ENST00000457039 LRRC28Q86X40 367 aaPredicted RBP11.87□□□□□ -0.51
SMPD4-215ENST00000457039 C1orf87Q8N0U7 546 aa11.87□□□□□ -0.51
SMPD4-215ENST00000457039 GCSAMQ8N6F7 178 aa11.87□□□□□ -0.51
SMPD4-215ENST00000457039 SCCPDHQ8NBX0 429 aa11.87□□□□□ -0.51
SMPD4-215ENST00000457039 OR11L1Q8NGX0 322 aa11.87□□□□□ -0.51
SMPD4-215ENST00000457039 CLDND2Q8NHS1 167 aa11.87□□□□□ -0.51
SMPD4-215ENST00000457039 GPR148Q8TDV2 347 aa11.87□□□□□ -0.51
SMPD4-215ENST00000457039 RPL3LQ92901 407 aaKnown RBP11.87□□□□□ -0.51
SMPD4-215ENST00000457039 CCDC90BQ9GZT6 254 aa11.87□□□□□ -0.51
SMPD4-215ENST00000457039 RNF7Q9UBF6 113 aa11.87□□□□□ -0.51
SMPD4-215ENST00000457039 DHDHQ9UQ10 334 aa11.87□□□□□ -0.51
SMPD4-215ENST00000457039 SERPINA3P01011 423 aa11.86□□□□□ -0.51
SMPD4-215ENST00000457039 IRF2P14316 349 aa11.86□□□□□ -0.51
SMPD4-215ENST00000457039 ZNF20P17024 532 aa11.86□□□□□ -0.51
SMPD4-215ENST00000457039 EGR1P18146 543 aa11.86□□□□□ -0.51
SMPD4-215ENST00000457039 CELP19835 753 aa11.86□□□□□ -0.51
SMPD4-215ENST00000457039 EEF1B2P24534 225 aaKnown RBP11.86□□□□□ -0.51
SMPD4-215ENST00000457039 IL2RGP31785 369 aa11.86□□□□□ -0.51
SMPD4-215ENST00000457039 CHN2P52757 468 aa11.86□□□□□ -0.51
SMPD4-215ENST00000457039 LMO4P61968 165 aa11.86□□□□□ -0.51
SMPD4-215ENST00000457039 MED22Q15528 200 aa11.86□□□□□ -0.51
SMPD4-215ENST00000457039 TMEM249Q2WGJ8 235 aa11.86□□□□□ -0.51
SMPD4-215ENST00000457039 TMEM155Q4W5P6 130 aa11.86□□□□□ -0.51
SMPD4-215ENST00000457039 FAM201AQ5SY85 155 aa11.86□□□□□ -0.51
SMPD4-215ENST00000457039 ZNF529Q6P280 563 aa11.86□□□□□ -0.51
SMPD4-215ENST00000457039 KCTD8Q6ZWB6 473 aa11.86□□□□□ -0.51
SMPD4-215ENST00000457039 OR13C5Q8NGS8 318 aa11.86□□□□□ -0.51
SMPD4-215ENST00000457039 OR10Z1Q8NGY1 313 aa11.86□□□□□ -0.51
SMPD4-215ENST00000457039 TSEN15Q8WW01 171 aaKnown RBP11.86□□□□□ -0.51
SMPD4-215ENST00000457039 C1orf159Q96HA4 380 aa11.86□□□□□ -0.51
SMPD4-215ENST00000457039 METTL17Q9H7H0 456 aaPredicted RBP11.86□□□□□ -0.51
SMPD4-215ENST00000457039 ISYNA1Q9NPH2 558 aa11.86□□□□□ -0.51
SMPD4-215ENST00000457039 ACOT13Q9NPJ3 140 aa11.86□□□□□ -0.51
SMPD4-215ENST00000457039 ANK3Q12955 4377 aaKnown RBP11.86□□□□□ -0.51
SMPD4-215ENST00000457039 IGKV1-27A0A075B6S5 117 aa11.85□□□□□ -0.51
SMPD4-215ENST00000457039 PPIAL4EA0A075B759 164 aa11.85□□□□□ -0.51
SMPD4-215ENST00000457039 PNMA8CA0A1B0GUJ8 204 aa11.85□□□□□ -0.51
SMPD4-215ENST00000457039 PPIAL4DF5H284 164 aa11.85□□□□□ -0.51
SMPD4-215ENST00000457039 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.85□□□□□ -0.51
SMPD4-215ENST00000457039 ALX3O95076 343 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms