RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 FOLR3P41439 243 aa10.91□□□□□ -0.66
LINC00959-201ENST00000456581 P2RY4P51582 365 aa10.91□□□□□ -0.66
LINC00959-201ENST00000456581 S100A10P60903 97 aa10.91□□□□□ -0.66
LINC00959-201ENST00000456581 RAP1BP61224 184 aa10.91□□□□□ -0.66
LINC00959-201ENST00000456581 RAP1AP62834 184 aa10.91□□□□□ -0.66
LINC00959-201ENST00000456581 ZP4Q12836 540 aa10.91□□□□□ -0.66
LINC00959-201ENST00000456581 HSPB2Q16082 182 aa10.91□□□□□ -0.66
LINC00959-201ENST00000456581 CLEC18BQ6UXF7 455 aa10.91□□□□□ -0.66
LINC00959-201ENST00000456581 SLC16A13Q7RTY0 426 aa10.91□□□□□ -0.66
LINC00959-201ENST00000456581 RPS19BP1Q86WX3 136 aaKnown RBP10.91□□□□□ -0.66
LINC00959-201ENST00000456581 RNF133Q8WVZ7 376 aa10.91□□□□□ -0.66
LINC00959-201ENST00000456581 PIGMQ9H3S5 423 aa10.91□□□□□ -0.66
LINC00959-201ENST00000456581 POLR1DQ9Y2S0 133 aa10.91□□□□□ -0.66
LINC00959-201ENST00000456581 FREM1Q5H8C1 2179 aa10.91□□□□□ -0.66
LINC00959-201ENST00000456581 A0A1W2PPE3 182 aa10.9□□□□□ -0.66
LINC00959-201ENST00000456581 KNG1P01042 644 aa10.9□□□□□ -0.66
LINC00959-201ENST00000456581 ISG15P05161 165 aa10.9□□□□□ -0.66
LINC00959-201ENST00000456581 GLI4P10075 376 aa10.9□□□□□ -0.66
LINC00959-201ENST00000456581 ACP1P24666 158 aa10.9□□□□□ -0.66
LINC00959-201ENST00000456581 ADH6P28332 368 aa10.9□□□□□ -0.66
LINC00959-201ENST00000456581 MSX1P28360 303 aa10.9□□□□□ -0.66
LINC00959-201ENST00000456581 GPR85P60893 370 aa10.9□□□□□ -0.66
LINC00959-201ENST00000456581 B2MP61769 119 aa10.9□□□□□ -0.66
LINC00959-201ENST00000456581 SUPT4H1P63272 117 aaKnown RBP10.9□□□□□ -0.66
LINC00959-201ENST00000456581 SRSF4Q08170 494 aaKnown RBP10.9□□□□□ -0.66
LINC00959-201ENST00000456581 RIPPLY1Q0D2K3 151 aa10.9□□□□□ -0.66
LINC00959-201ENST00000456581 AIMP2Q13155 320 aaKnown RBP10.9□□□□□ -0.66
LINC00959-201ENST00000456581 TOMM20Q15388 145 aa10.9□□□□□ -0.66
LINC00959-201ENST00000456581 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.9□□□□□ -0.66
LINC00959-201ENST00000456581 COL25A1Q9BXS0 654 aaPredicted RBP10.9□□□□□ -0.66
LINC00959-201ENST00000456581 SLCO5A1Q9H2Y9 848 aa10.9□□□□□ -0.66
LINC00959-201ENST00000456581 ALKBH4Q9NXW9 302 aa10.9□□□□□ -0.66
LINC00959-201ENST00000456581 COA4Q9NYJ1 87 aa10.9□□□□□ -0.66
LINC00959-201ENST00000456581 ASH2LQ9UBL3 628 aa10.9□□□□□ -0.66
LINC00959-201ENST00000456581 LHFPL6Q9Y693 200 aa10.9□□□□□ -0.66
LINC00959-201ENST00000456581 DSPP15924 2871 aaKnown RBP10.9□□□□□ -0.66
LINC00959-201ENST00000456581 IGLV3-32A0A0A0MS00 114 aa10.9□□□□□ -0.66
LINC00959-201ENST00000456581 TTLL8A6PVC2 850 aa10.9□□□□□ -0.66
LINC00959-201ENST00000456581 ETV2O00321 342 aaPredicted RBP10.9□□□□□ -0.66
LINC00959-201ENST00000456581 FBXO24O75426 580 aa10.9□□□□□ -0.66
LINC00959-201ENST00000456581 CRTAPO75718 401 aaPredicted RBP10.9□□□□□ -0.66
LINC00959-201ENST00000456581 SERPINA5P05154 406 aa10.9□□□□□ -0.66
LINC00959-201ENST00000456581 TMEM244Q5VVB8 128 aa10.9□□□□□ -0.66
LINC00959-201ENST00000456581 LPCAT3Q6P1A2 487 aa10.9□□□□□ -0.66
LINC00959-201ENST00000456581 ZNF585AQ6P3V2 769 aa10.9□□□□□ -0.66
LINC00959-201ENST00000456581 ZNF704Q6ZNC4 412 aaPredicted RBP10.9□□□□□ -0.66
LINC00959-201ENST00000456581 PGAP1Q75T13 922 aa10.9□□□□□ -0.66
LINC00959-201ENST00000456581 RAB11FIP2Q7L804 512 aa10.9□□□□□ -0.66
LINC00959-201ENST00000456581 PPP1R32Q7Z5V6 425 aa10.9□□□□□ -0.66
LINC00959-201ENST00000456581 SLC22A24Q8N4F4 322 aa10.9□□□□□ -0.66
LINC00959-201ENST00000456581 FADS6Q8N9I5 356 aa10.9□□□□□ -0.66
LINC00959-201ENST00000456581 NAXEQ8NCW5 288 aa10.9□□□□□ -0.66
LINC00959-201ENST00000456581 UCN2Q96RP3 112 aa10.9□□□□□ -0.66
LINC00959-201ENST00000456581 SMIM3Q9BZL3 60 aa10.9□□□□□ -0.66
LINC00959-201ENST00000456581 GPR84Q9NQS5 396 aa10.9□□□□□ -0.66
LINC00959-201ENST00000456581 SLC2A8Q9NY64 477 aa10.9□□□□□ -0.66
LINC00959-201ENST00000456581 ZNF581Q9P0T4 197 aa10.9□□□□□ -0.66
LINC00959-201ENST00000456581 ZNF629Q9UEG4 869 aaPredicted RBP10.9□□□□□ -0.66
LINC00959-201ENST00000456581 B3GALT5Q9Y2C3 310 aa10.9□□□□□ -0.66
LINC00959-201ENST00000456581 GVINP1Q7Z2Y8 2422 aa10.9□□□□□ -0.67
LINC00959-201ENST00000456581 MEGF11A6BM72 1044 aa10.9□□□□□ -0.67
LINC00959-201ENST00000456581 PRR33A8MZF0 331 aa10.9□□□□□ -0.67
LINC00959-201ENST00000456581 TP53I11O14683 189 aa10.9□□□□□ -0.67
LINC00959-201ENST00000456581 DUS4LO95620 317 aaKnown RBP10.9□□□□□ -0.67
LINC00959-201ENST00000456581 WDPCPO95876 746 aa10.9□□□□□ -0.67
LINC00959-201ENST00000456581 ZNF17P17021 662 aa10.9□□□□□ -0.67
LINC00959-201ENST00000456581 NME2P22392 152 aa10.9□□□□□ -0.67
LINC00959-201ENST00000456581 FLI1Q01543 452 aaPredicted RBP10.9□□□□□ -0.67
LINC00959-201ENST00000456581 RAB32Q13637 225 aa10.9□□□□□ -0.67
LINC00959-201ENST00000456581 SLC25A53Q5H9E4 307 aa10.9□□□□□ -0.67
LINC00959-201ENST00000456581 DCAF12Q5T6F0 453 aa10.9□□□□□ -0.67
LINC00959-201ENST00000456581 RAET1LQ5VY80 246 aa10.9□□□□□ -0.67
LINC00959-201ENST00000456581 OR2A2Q6IF42 318 aa10.9□□□□□ -0.67
LINC00959-201ENST00000456581 HOGA1Q86XE5 327 aa10.9□□□□□ -0.67
LINC00959-201ENST00000456581 BAP18Q8IXM2 172 aa10.9□□□□□ -0.67
LINC00959-201ENST00000456581 OR5AS1Q8N127 324 aa10.9□□□□□ -0.67
LINC00959-201ENST00000456581 CT55Q8WUE5 264 aa10.9□□□□□ -0.67
LINC00959-201ENST00000456581 BSCL2Q96G97 398 aaPredicted RBP10.9□□□□□ -0.67
LINC00959-201ENST00000456581 C1orf147Q96MC9 270 aaPredicted RBP10.9□□□□□ -0.67
LINC00959-201ENST00000456581 SPENQ96T58 3664 aaKnown RBP10.9□□□□□ -0.67
LINC00959-201ENST00000456581 MYOZ1Q9NP98 299 aaPredicted RBP10.9□□□□□ -0.67
LINC00959-201ENST00000456581 FOXJ2Q9P0K8 574 aa10.9□□□□□ -0.67
LINC00959-201ENST00000456581 TCFL5Q9UL49 500 aa10.9□□□□□ -0.67
LINC00959-201ENST00000456581 PADI1Q9ULC6 663 aa10.9□□□□□ -0.67
LINC00959-201ENST00000456581 MRPS28Q9Y2Q9 187 aaKnown RBP10.9□□□□□ -0.67
LINC00959-201ENST00000456581 DBX1A6NMT0 343 aa10.89□□□□□ -0.67
LINC00959-201ENST00000456581 CDX4O14627 284 aaPredicted RBP10.89□□□□□ -0.67
LINC00959-201ENST00000456581 TRAF3IP2O43734 574 aaPredicted RBP10.89□□□□□ -0.67
LINC00959-201ENST00000456581 HCKP08631 526 aa10.89□□□□□ -0.67
LINC00959-201ENST00000456581 CD37P11049 281 aa10.89□□□□□ -0.67
LINC00959-201ENST00000456581 LPAR6P43657 344 aa10.89□□□□□ -0.67
LINC00959-201ENST00000456581 SSR4P51571 173 aa10.89□□□□□ -0.67
LINC00959-201ENST00000456581 DNM1P34Q6PK57 102 aa10.89□□□□□ -0.67
LINC00959-201ENST00000456581 UEVLDQ8IX04 471 aa10.89□□□□□ -0.67
LINC00959-201ENST00000456581 NKAIN3Q8N8D7 197 aa10.89□□□□□ -0.67
LINC00959-201ENST00000456581 OR10H5Q8NGA6 315 aa10.89□□□□□ -0.67
LINC00959-201ENST00000456581 OR8B12Q8NGG6 310 aa10.89□□□□□ -0.67
LINC00959-201ENST00000456581 LILRB1Q8NHL6 650 aaPredicted RBP10.89□□□□□ -0.67
LINC00959-201ENST00000456581 RAB3CQ96E17 227 aa10.89□□□□□ -0.67
LINC00959-201ENST00000456581 KLF2Q9Y5W3 355 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms