RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 SLC36A1Q7Z2H8 476 aa13.11□□□□□ -0.31
GPC1-206ENST00000455111 ARHGAP24Q8N264 748 aa13.11□□□□□ -0.31
GPC1-206ENST00000455111 C11orf42Q8N5U0 333 aa13.11□□□□□ -0.31
GPC1-206ENST00000455111 PIGCQ92535 297 aa13.11□□□□□ -0.31
GPC1-206ENST00000455111 CCDC124Q96CT7 223 aaKnown RBP13.11□□□□□ -0.31
GPC1-206ENST00000455111 OR51I2Q9H344 312 aa13.11□□□□□ -0.31
GPC1-206ENST00000455111 C16orf95Q9H693 158 aa13.11□□□□□ -0.31
GPC1-206ENST00000455111 PRR23D1E9PI22 279 aaPredicted RBP13.1□□□□□ -0.31
GPC1-206ENST00000455111 SIGLEC5O15389 551 aa13.1□□□□□ -0.31
GPC1-206ENST00000455111 SRSF10O75494 262 aaKnown RBP13.1□□□□□ -0.31
GPC1-206ENST00000455111 ACAA1P09110 424 aaPredicted RBP13.1□□□□□ -0.31
GPC1-206ENST00000455111 PRR23D2P0DMB1 279 aaPredicted RBP13.1□□□□□ -0.31
GPC1-206ENST00000455111 PSG2P11465 335 aa13.1□□□□□ -0.31
GPC1-206ENST00000455111 POU1F1P28069 291 aa13.1□□□□□ -0.31
GPC1-206ENST00000455111 SAA4P35542 130 aa13.1□□□□□ -0.31
GPC1-206ENST00000455111 ERVFRD-1P60508 538 aa13.1□□□□□ -0.31
GPC1-206ENST00000455111 IL5RAQ01344 420 aa13.1□□□□□ -0.31
GPC1-206ENST00000455111 ZNRF1Q8ND25 227 aa13.1□□□□□ -0.31
GPC1-206ENST00000455111 PPP1R35Q8TAP8 253 aa13.1□□□□□ -0.31
GPC1-206ENST00000455111 RNF170Q96K19 258 aa13.1□□□□□ -0.31
GPC1-206ENST00000455111 MICU1Q9BPX6 476 aa13.1□□□□□ -0.31
GPC1-206ENST00000455111 RTL8AQ9BWD3 113 aa13.1□□□□□ -0.31
GPC1-206ENST00000455111 TTTY10Q9BZA0 68 aa13.1□□□□□ -0.31
GPC1-206ENST00000455111 RGCCQ9H4X1 137 aa13.1□□□□□ -0.31
GPC1-206ENST00000455111 KIF17Q9P2E2 1029 aa13.1□□□□□ -0.31
GPC1-206ENST00000455111 NOTCH1P46531 2555 aa13.09□□□□□ -0.31
GPC1-206ENST00000455111 TMEM210A6NLX4 147 aa13.09□□□□□ -0.31
GPC1-206ENST00000455111 TSPAN9O75954 239 aa13.09□□□□□ -0.31
GPC1-206ENST00000455111 APOC1P02654 83 aa13.09□□□□□ -0.31
GPC1-206ENST00000455111 OSMP13725 252 aa13.09□□□□□ -0.31
GPC1-206ENST00000455111 CFL1P23528 166 aaKnown RBP13.09□□□□□ -0.31
GPC1-206ENST00000455111 GNALP38405 381 aa13.09□□□□□ -0.31
GPC1-206ENST00000455111 GPM6AP51674 278 aa13.09□□□□□ -0.31
GPC1-206ENST00000455111 MFGE8Q08431 387 aaPredicted RBP13.09□□□□□ -0.31
GPC1-206ENST00000455111 CEP78Q5JTW2 689 aa13.09□□□□□ -0.31
GPC1-206ENST00000455111 CRIP3Q6Q6R5 217 aa13.09□□□□□ -0.31
GPC1-206ENST00000455111 ZDHHC23Q8IYP9 409 aa13.09□□□□□ -0.31
GPC1-206ENST00000455111 H1FXQ92522 213 aaKnown RBP13.09□□□□□ -0.31
GPC1-206ENST00000455111 DMRTB1Q96MA1 342 aa13.09□□□□□ -0.31
GPC1-206ENST00000455111 ZNF488Q96MN9 340 aa13.09□□□□□ -0.31
GPC1-206ENST00000455111 DNTTIP1Q9H147 329 aa13.09□□□□□ -0.31
GPC1-206ENST00000455111 NLKQ9UBE8 527 aa13.09□□□□□ -0.31
GPC1-206ENST00000455111 SLC25A10Q9UBX3 287 aaPredicted RBP13.09□□□□□ -0.31
GPC1-206ENST00000455111 VPREB3Q9UKI3 123 aa13.09□□□□□ -0.31
GPC1-206ENST00000455111 SIGLEC9Q9Y336 463 aa13.09□□□□□ -0.31
GPC1-206ENST00000455111 DSCAML1Q8TD84 2053 aa13.08□□□□□ -0.32
GPC1-206ENST00000455111 ZNF816-ZNF321PA0A0X1KG74 233 aa13.08□□□□□ -0.32
GPC1-206ENST00000455111 OR2AT4A6NND4 320 aa13.08□□□□□ -0.32
GPC1-206ENST00000455111 ZNF732B4DXR9 585 aa13.08□□□□□ -0.32
GPC1-206ENST00000455111 MAGEB4O15481 346 aaPredicted RBP13.08□□□□□ -0.32
GPC1-206ENST00000455111 PRODHO43272 600 aa13.08□□□□□ -0.32
GPC1-206ENST00000455111 MRPL3P09001 348 aaKnown RBP13.08□□□□□ -0.32
GPC1-206ENST00000455111 CALB2P22676 271 aa13.08□□□□□ -0.32
GPC1-206ENST00000455111 BCDIN3DQ7Z5W3 292 aaKnown RBP13.08□□□□□ -0.32
GPC1-206ENST00000455111 CD177Q8N6Q3 437 aa13.08□□□□□ -0.32
GPC1-206ENST00000455111 ZNF454Q8N9F8 522 aa13.08□□□□□ -0.32
GPC1-206ENST00000455111 AQP3Q92482 292 aa13.08□□□□□ -0.32
GPC1-206ENST00000455111 RORBQ92753 470 aa13.08□□□□□ -0.32
GPC1-206ENST00000455111 DUS3LQ96G46 650 aaKnown RBP13.08□□□□□ -0.32
GPC1-206ENST00000455111 MMP27Q9H306 513 aa13.08□□□□□ -0.32
GPC1-206ENST00000455111 SLC25A19Q9HC21 320 aa13.08□□□□□ -0.32
GPC1-206ENST00000455111 C19orf12Q9NSK7 152 aa13.08□□□□□ -0.32
GPC1-206ENST00000455111 DNAH3Q8TD57 4116 aa13.07□□□□□ -0.32
GPC1-206ENST00000455111 TET2Q6N021 2002 aaPredicted RBP13.07□□□□□ -0.32
GPC1-206ENST00000455111 ANXA2P2A6NMY6 339 aa13.07□□□□□ -0.32
GPC1-206ENST00000455111 M0R129 80 aa13.07□□□□□ -0.32
GPC1-206ENST00000455111 GPR37O15354 613 aa13.07□□□□□ -0.32
GPC1-206ENST00000455111 FBP1P09467 338 aa13.07□□□□□ -0.32
GPC1-206ENST00000455111 CEBPDP49716 269 aaPredicted RBP13.07□□□□□ -0.32
GPC1-206ENST00000455111 MNAT1P51948 309 aa13.07□□□□□ -0.32
GPC1-206ENST00000455111 UBE2E1P51965 193 aa13.07□□□□□ -0.32
GPC1-206ENST00000455111 CAV3P56539 151 aa13.07□□□□□ -0.32
GPC1-206ENST00000455111 APOFQ13790 326 aa13.07□□□□□ -0.32
GPC1-206ENST00000455111 GK3PQ14409 553 aa13.07□□□□□ -0.32
GPC1-206ENST00000455111 LRRC10Q5BKY1 277 aa13.07□□□□□ -0.32
GPC1-206ENST00000455111 SLC35D3Q5M8T2 416 aa13.07□□□□□ -0.32
GPC1-206ENST00000455111 SLC35E4Q6ICL7 350 aa13.07□□□□□ -0.32
GPC1-206ENST00000455111 GDPGP1Q6ZNW5 385 aa13.07□□□□□ -0.32
GPC1-206ENST00000455111 KCTD8Q6ZWB6 473 aa13.07□□□□□ -0.32
GPC1-206ENST00000455111 PIFOQ8TCI5 191 aa13.07□□□□□ -0.32
GPC1-206ENST00000455111 TEAD3Q99594 435 aa13.07□□□□□ -0.32
GPC1-206ENST00000455111 THTPAQ9BU02 230 aa13.07□□□□□ -0.32
GPC1-206ENST00000455111 NIPAL2Q9H841 368 aa13.07□□□□□ -0.32
GPC1-206ENST00000455111 MEIOCA2RUB1 952 aa13.06□□□□□ -0.32
GPC1-206ENST00000455111 SLC22A31A6NKX4 558 aa13.06□□□□□ -0.32
GPC1-206ENST00000455111 AQP12BA6NM10 295 aa13.06□□□□□ -0.32
GPC1-206ENST00000455111 M0R1W7 72 aa13.06□□□□□ -0.32
GPC1-206ENST00000455111 SYNGR1O43759 233 aa13.06□□□□□ -0.32
GPC1-206ENST00000455111 TTRP02766 147 aa13.06□□□□□ -0.32
GPC1-206ENST00000455111 FAHP16930 419 aa13.06□□□□□ -0.32
GPC1-206ENST00000455111 NDUFB7P17568 137 aa13.06□□□□□ -0.32
GPC1-206ENST00000455111 GLRA1P23415 457 aa13.06□□□□□ -0.32
GPC1-206ENST00000455111 EFNB1P98172 346 aa13.06□□□□□ -0.32
GPC1-206ENST00000455111 EGR3Q06889 387 aa13.06□□□□□ -0.32
GPC1-206ENST00000455111 CEACAM21Q3KPI0 293 aa13.06□□□□□ -0.32
GPC1-206ENST00000455111 C1orf122Q6ZSJ8 110 aa13.06□□□□□ -0.32
GPC1-206ENST00000455111 C1QL4Q86Z23 238 aa13.06□□□□□ -0.32
GPC1-206ENST00000455111 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.06□□□□□ -0.32
GPC1-206ENST00000455111 AQP12AQ8IXF9 295 aa13.06□□□□□ -0.32
GPC1-206ENST00000455111 BATF2Q8N1L9 274 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms