RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 RNF133Q8WVZ7 376 aa6.55□□□□□ -1.36
NIF3L1-209ENST00000454952 OR5P3Q8WZ94 311 aa6.55□□□□□ -1.36
NIF3L1-209ENST00000454952 TNFRSF14Q92956 283 aa6.55□□□□□ -1.36
NIF3L1-209ENST00000454952 DUS3LQ96G46 650 aaKnown RBP6.55□□□□□ -1.36
NIF3L1-209ENST00000454952 PGAM5Q96HS1 289 aa6.55□□□□□ -1.36
NIF3L1-209ENST00000454952 OR4F4Q96R69 305 aa6.55□□□□□ -1.36
NIF3L1-209ENST00000454952 INTS14Q96SY0 518 aa6.55□□□□□ -1.36
NIF3L1-209ENST00000454952 CDCA4Q9BXL8 241 aa6.55□□□□□ -1.36
NIF3L1-209ENST00000454952 NMNAT2Q9BZQ4 307 aa6.55□□□□□ -1.36
NIF3L1-209ENST00000454952 MEGF9Q9H1U4 602 aa6.55□□□□□ -1.36
NIF3L1-209ENST00000454952 SEMA6AQ9H2E6 1030 aa6.55□□□□□ -1.36
NIF3L1-209ENST00000454952 EGLN3Q9H6Z9 239 aa6.55□□□□□ -1.36
NIF3L1-209ENST00000454952 NIPAL2Q9H841 368 aa6.55□□□□□ -1.36
NIF3L1-209ENST00000454952 HEXA-AS1Q9H8Q6 139 aa6.55□□□□□ -1.36
NIF3L1-209ENST00000454952 NECAP2Q9NVZ3 263 aa6.55□□□□□ -1.36
NIF3L1-209ENST00000454952 NDE1Q9NXR1 346 aa6.55□□□□□ -1.36
NIF3L1-209ENST00000454952 NLKQ9UBE8 527 aa6.55□□□□□ -1.36
NIF3L1-209ENST00000454952 RHBDD3Q9Y3P4 386 aa6.55□□□□□ -1.36
NIF3L1-209ENST00000454952 LRP12Q9Y561 859 aa6.55□□□□□ -1.36
NIF3L1-209ENST00000454952 A0A1B0GW55 424 aa6.54□□□□□ -1.36
NIF3L1-209ENST00000454952 OR2AT4A6NND4 320 aa6.54□□□□□ -1.36
NIF3L1-209ENST00000454952 H3BUI4 141 aa6.54□□□□□ -1.36
NIF3L1-209ENST00000454952 TNFRSF11BO00300 401 aa6.54□□□□□ -1.36
NIF3L1-209ENST00000454952 ANGPTL7O43827 346 aa6.54□□□□□ -1.36
NIF3L1-209ENST00000454952 ALDOBP05062 364 aa6.54□□□□□ -1.36
NIF3L1-209ENST00000454952 H2BFMP0C1H6 154 aa6.54□□□□□ -1.36
NIF3L1-209ENST00000454952 DUX4L2P0CJ85 424 aa6.54□□□□□ -1.36
NIF3L1-209ENST00000454952 DUX4L3P0CJ86 424 aa6.54□□□□□ -1.36
NIF3L1-209ENST00000454952 DUX4L4P0CJ87 422 aa6.54□□□□□ -1.36
NIF3L1-209ENST00000454952 DUX4L5P0CJ88 424 aa6.54□□□□□ -1.36
NIF3L1-209ENST00000454952 DUX4L6P0CJ89 424 aa6.54□□□□□ -1.36
NIF3L1-209ENST00000454952 DUX4L7P0CJ90 424 aa6.54□□□□□ -1.36
NIF3L1-209ENST00000454952 FAHP16930 419 aa6.54□□□□□ -1.36
NIF3L1-209ENST00000454952 GLRA1P23415 457 aa6.54□□□□□ -1.36
NIF3L1-209ENST00000454952 GABRA2P47869 451 aa6.54□□□□□ -1.36
NIF3L1-209ENST00000454952 LGALS4P56470 323 aa6.54□□□□□ -1.36
NIF3L1-209ENST00000454952 LOXL3P58215 753 aa6.54□□□□□ -1.36
NIF3L1-209ENST00000454952 GNG3P63215 75 aa6.54□□□□□ -1.36
NIF3L1-209ENST00000454952 PRDX4Q13162 271 aa6.54□□□□□ -1.36
NIF3L1-209ENST00000454952 KLRD1Q13241 179 aa6.54□□□□□ -1.36
NIF3L1-209ENST00000454952 DGUOKQ16854 277 aa6.54□□□□□ -1.36
NIF3L1-209ENST00000454952 GFOD2Q3B7J2 385 aa6.54□□□□□ -1.36
NIF3L1-209ENST00000454952 HSP90B2PQ58FF3 399 aa6.54□□□□□ -1.36
NIF3L1-209ENST00000454952 FAM76BQ5HYJ3 339 aa6.54□□□□□ -1.36
NIF3L1-209ENST00000454952 DUX4L9Q6RFH8 374 aaPredicted RBP6.54□□□□□ -1.36
NIF3L1-209ENST00000454952 LYPD4Q6UWN0 246 aa6.54□□□□□ -1.36
NIF3L1-209ENST00000454952 Q6ZPA2 131 aa6.54□□□□□ -1.36
NIF3L1-209ENST00000454952 PRSS45Q7RTY3 260 aa6.54□□□□□ -1.36
NIF3L1-209ENST00000454952 ZDHHC23Q8IYP9 409 aa6.54□□□□□ -1.36
NIF3L1-209ENST00000454952 FGFRL1Q8N441 504 aa6.54□□□□□ -1.36
NIF3L1-209ENST00000454952 OR5T2Q8NGG2 359 aa6.54□□□□□ -1.36
NIF3L1-209ENST00000454952 OR6N2Q8NGY6 317 aa6.54□□□□□ -1.36
NIF3L1-209ENST00000454952 OR5K1Q8NHB7 308 aa6.54□□□□□ -1.36
NIF3L1-209ENST00000454952 FAM81AQ8TBF8 368 aa6.54□□□□□ -1.36
NIF3L1-209ENST00000454952 MRAPQ8TCY5 172 aa6.54□□□□□ -1.36
NIF3L1-209ENST00000454952 RPL3LQ92901 407 aaKnown RBP6.54□□□□□ -1.36
NIF3L1-209ENST00000454952 RNF170Q96K19 258 aa6.54□□□□□ -1.36
NIF3L1-209ENST00000454952 GAFA1Q96PS6 74 aa6.54□□□□□ -1.36
NIF3L1-209ENST00000454952 ABHD6Q9BV23 337 aa6.54□□□□□ -1.36
NIF3L1-209ENST00000454952 TSSK6Q9BXA6 273 aa6.54□□□□□ -1.36
NIF3L1-209ENST00000454952 SNTG1Q9NSN8 517 aa6.54□□□□□ -1.36
NIF3L1-209ENST00000454952 RASL12Q9NYN1 266 aa6.54□□□□□ -1.36
NIF3L1-209ENST00000454952 DUX4Q9UBX2 424 aa6.54□□□□□ -1.36
NIF3L1-209ENST00000454952 PITPNC1Q9UKF7 332 aa6.54□□□□□ -1.36
NIF3L1-209ENST00000454952 LYVE1Q9Y5Y7 322 aa6.54□□□□□ -1.36
NIF3L1-209ENST00000454952 PRKDCP78527 4128 aaKnown RBP6.54□□□□□ -1.36
NIF3L1-209ENST00000454952 ACOD1A6NK06 481 aa6.53□□□□□ -1.36
NIF3L1-209ENST00000454952 OR5B21A6NL26 309 aa6.53□□□□□ -1.36
NIF3L1-209ENST00000454952 ZNF850A8MQ14 1090 aa6.53□□□□□ -1.36
NIF3L1-209ENST00000454952 SLC1A7O00341 560 aa6.53□□□□□ -1.36
NIF3L1-209ENST00000454952 ARPC2O15144 300 aa6.53□□□□□ -1.36
NIF3L1-209ENST00000454952 PEX14O75381 377 aa6.53□□□□□ -1.36
NIF3L1-209ENST00000454952 PF4P02776 101 aa6.53□□□□□ -1.36
NIF3L1-209ENST00000454952 GYPBP06028 91 aa6.53□□□□□ -1.36
NIF3L1-209ENST00000454952 VSIG10L2P0DP72 767 aa6.53□□□□□ -1.36
NIF3L1-209ENST00000454952 PSKH1P11801 424 aa6.53□□□□□ -1.36
NIF3L1-209ENST00000454952 ATP6V1B1P15313 513 aa6.53□□□□□ -1.36
NIF3L1-209ENST00000454952 AMY2BP19961 511 aa6.53□□□□□ -1.36
NIF3L1-209ENST00000454952 OPRL1P41146 370 aa6.53□□□□□ -1.36
NIF3L1-209ENST00000454952 CAPZA1P52907 286 aa6.53□□□□□ -1.36
NIF3L1-209ENST00000454952 GMFBP60983 142 aa6.53□□□□□ -1.36
NIF3L1-209ENST00000454952 MXRA7P84157 204 aa6.53□□□□□ -1.36
NIF3L1-209ENST00000454952 DBPQ10586 325 aaPredicted RBP6.53□□□□□ -1.36
NIF3L1-209ENST00000454952 GK3PQ14409 553 aa6.53□□□□□ -1.36
NIF3L1-209ENST00000454952 SMIM21Q3B7S5 101 aa6.53□□□□□ -1.36
NIF3L1-209ENST00000454952 KLHL12Q53G59 568 aa6.53□□□□□ -1.36
NIF3L1-209ENST00000454952 HIST2H2BDQ6DRA6 164 aa6.53□□□□□ -1.36
NIF3L1-209ENST00000454952 NDUFA11Q86Y39 141 aa6.53□□□□□ -1.36
NIF3L1-209ENST00000454952 ERI1Q8IV48 349 aaKnown RBP6.53□□□□□ -1.36
NIF3L1-209ENST00000454952 FAM185AQ8N0U4 392 aa6.53□□□□□ -1.36
NIF3L1-209ENST00000454952 PGAM4Q8N0Y7 254 aa6.53□□□□□ -1.36
NIF3L1-209ENST00000454952 RNF148Q8N7C7 305 aa6.53□□□□□ -1.36
NIF3L1-209ENST00000454952 AQP11Q8NBQ7 271 aa6.53□□□□□ -1.36
NIF3L1-209ENST00000454952 TMEM185AQ8NFB2 350 aa6.53□□□□□ -1.36
NIF3L1-209ENST00000454952 OR9Q2Q8NGE9 314 aa6.53□□□□□ -1.36
NIF3L1-209ENST00000454952 PPP1R35Q8TAP8 253 aa6.53□□□□□ -1.36
NIF3L1-209ENST00000454952 TEX47Q8TBZ9 253 aa6.53□□□□□ -1.36
NIF3L1-209ENST00000454952 ZNRF4Q8WWF5 429 aa6.53□□□□□ -1.36
NIF3L1-209ENST00000454952 PIGCQ92535 297 aa6.53□□□□□ -1.36
NIF3L1-209ENST00000454952 SGCDQ92629 289 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms