RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 SPANXN2Q5MJ10 180 aa4.21□□□□□ -1.74
RIF1-207ENST00000454583 ZNF626Q68DY1 528 aa4.21□□□□□ -1.74
RIF1-207ENST00000454583 ARL9Q6T311 187 aa4.21□□□□□ -1.74
RIF1-207ENST00000454583 Q6ZS49 121 aa4.21□□□□□ -1.74
RIF1-207ENST00000454583 LDLRAD3Q86YD5 345 aa4.21□□□□□ -1.74
RIF1-207ENST00000454583 OR4D10Q8NGI6 311 aa4.21□□□□□ -1.74
RIF1-207ENST00000454583 OR5M9Q8NGP3 310 aa4.21□□□□□ -1.74
RIF1-207ENST00000454583 OR5AK2Q8NH90 309 aa4.21□□□□□ -1.74
RIF1-207ENST00000454583 SNAPC3Q92966 411 aa4.21□□□□□ -1.74
RIF1-207ENST00000454583 CHST5Q9GZS9 411 aa4.21□□□□□ -1.74
RIF1-207ENST00000454583 HDHD2Q9H0R4 259 aa4.21□□□□□ -1.74
RIF1-207ENST00000454583 OR51V1Q9H2C8 321 aa4.21□□□□□ -1.74
RIF1-207ENST00000454583 EXTL2Q9UBQ6 330 aa4.21□□□□□ -1.74
RIF1-207ENST00000454583 TMEM14AQ9Y6G1 99 aa4.21□□□□□ -1.74
RIF1-207ENST00000454583 TLN1Q9Y490 2541 aaKnown RBP4.21□□□□□ -1.74
RIF1-207ENST00000454583 PLSCR5A0PG75 271 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 F5H0A9 414 aaPredicted RBP4.2□□□□□ -1.74
RIF1-207ENST00000454583 NPIPA3F8WFD2 350 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 NGFP01138 241 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 CXCL3P19876 107 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 IFNA8P32881 189 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 MPV17P39210 176 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 CSNK1A1P48729 337 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 ASCL1P50553 236 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 TMEM50BP56557 158 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 GRB2P62993 217 aaKnown RBP4.2□□□□□ -1.74
RIF1-207ENST00000454583 MRPS10P82664 201 aaKnown RBP4.2□□□□□ -1.74
RIF1-207ENST00000454583 SLC3A1Q07837 685 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 TAB1Q15750 504 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 CD276Q5ZPR3 534 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 DRAM2Q6UX65 266 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 GLDNQ6ZMI3 551 aaPredicted RBP4.2□□□□□ -1.74
RIF1-207ENST00000454583 AAED1Q7RTV5 226 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 UXS1Q8NBZ7 420 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 OR5P3Q8WZ94 311 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 OR51I2Q9H344 312 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 KCNK15Q9H427 330 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 ASH2LQ9UBL3 628 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 GNG8Q9UK08 70 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 NOSIPQ9Y314 301 aaKnown RBP4.2□□□□□ -1.74
RIF1-207ENST00000454583 NUBP2Q9Y5Y2 271 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 NCOR2Q9Y618 2525 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 SMIM30A4D0T7 59 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 MFNGO00587 321 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 CASKO14936 926 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 RAD51DO75771 328 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 ARL6IP5O75915 188 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 KDM4BO94953 1096 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 TCRBP04435 133 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 AMY2BP19961 511 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 HOXC12P31275 282 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 ALKBH6Q3KRA9 238 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 PABPC1L2AQ5JQF8 200 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 ZNF544Q6NX49 715 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 LRRN1Q6UXK5 716 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 Q6ZTK2 550 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 LINC00346Q8IVM7 164 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 POC5Q8NA72 575 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 CCDC54Q8NEL0 328 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 OR51T1Q8NGJ9 327 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 OR52I2Q8NH67 350 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 FOXN4Q96NZ1 517 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 SORCS2Q96PQ0 1159 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 FYTTD1Q96QD9 318 aaKnown RBP4.2□□□□□ -1.74
RIF1-207ENST00000454583 CXXC4Q9H2H0 198 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 ZNF581Q9P0T4 197 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 POLR3KQ9Y2Y1 108 aaPredicted RBP4.2□□□□□ -1.74
RIF1-207ENST00000454583 AMDHD2Q9Y303 409 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 TRBV6-7A0A0A0MS04 114 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 RNF222A6NCQ9 220 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 A6NNC1 897 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 PATE4P0C8F1 98 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 GNLYP22749 145 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 CD200P41217 278 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 ERVS71-1P61550 626 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 NAAAQ02083 359 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 OC90Q02509 493 aaPredicted RBP4.2□□□□□ -1.74
RIF1-207ENST00000454583 FAM27E3Q08E93 113 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 CBX3Q13185 183 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 SF3B4Q15427 424 aaKnown RBP eCLIP4.2□□□□□ -1.743e-10■■□□□ 11.7
RIF1-207ENST00000454583 TSC22D1Q15714 1073 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 IGFBP7Q16270 282 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 SRSF7Q16629 238 aaKnown RBP eCLIP4.2□□□□□ -1.74
RIF1-207ENST00000454583 TEX36Q5VZQ5 186 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 Q6P435 159 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 FAM180AQ6UWF9 173 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 FAM131AQ6UXB0 335 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 BEND4Q6ZU67 534 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 BHLHA15Q7RTS1 189 aaPredicted RBP4.2□□□□□ -1.74
RIF1-207ENST00000454583 RNASE6Q93091 150 aaKnown RBP4.2□□□□□ -1.74
RIF1-207ENST00000454583 APH1AQ96BI3 265 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 DIRAS2Q96HU8 199 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 LPAR5Q9H1C0 372 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 ELOVL3Q9HB03 270 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 BARX1Q9HBU1 254 aaPredicted RBP4.2□□□□□ -1.74
RIF1-207ENST00000454583 DLL4Q9NR61 685 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 PARPBPQ9NWS1 579 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 SLC13A4Q9UKG4 626 aa4.2□□□□□ -1.74
RIF1-207ENST00000454583 MCTS1Q9ULC4 181 aaKnown RBP4.2□□□□□ -1.74
RIF1-207ENST00000454583 AK6Q9Y3D8 172 aaKnown RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms