RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 IGHV3-13P01766 116 aa9.36□□□□□ -0.91
SCN9A-205ENST00000454569 OR4A8P0C604 315 aa9.36□□□□□ -0.91
SCN9A-205ENST00000454569 ZNF12P17014 697 aa9.36□□□□□ -0.91
SCN9A-205ENST00000454569 CFL1P23528 166 aaKnown RBP9.36□□□□□ -0.91
SCN9A-205ENST00000454569 S100A5P33763 92 aa9.36□□□□□ -0.91
SCN9A-205ENST00000454569 CLDN12P56749 244 aa9.36□□□□□ -0.91
SCN9A-205ENST00000454569 PLA2G7Q13093 441 aa9.36□□□□□ -0.91
SCN9A-205ENST00000454569 MOGQ16653 247 aa9.36□□□□□ -0.91
SCN9A-205ENST00000454569 MST1LQ2TV78 715 aa9.36□□□□□ -0.91
SCN9A-205ENST00000454569 CLVS2Q5SYC1 327 aa9.36□□□□□ -0.91
SCN9A-205ENST00000454569 HES5Q5TA89 166 aa9.36□□□□□ -0.91
SCN9A-205ENST00000454569 UTS2BQ765I0 119 aa9.36□□□□□ -0.91
SCN9A-205ENST00000454569 SSX8Q7RTT4 187 aa9.36□□□□□ -0.91
SCN9A-205ENST00000454569 WDR86Q86TI4 376 aa9.36□□□□□ -0.91
SCN9A-205ENST00000454569 ZCCHC24Q8N2G6 241 aaKnown RBP9.36□□□□□ -0.91
SCN9A-205ENST00000454569 OR6Q1Q8NGQ2 317 aa9.36□□□□□ -0.91
SCN9A-205ENST00000454569 MRPL24Q96A35 216 aaKnown RBP9.36□□□□□ -0.91
SCN9A-205ENST00000454569 PAPOLGQ9BWT3 736 aaKnown RBP9.36□□□□□ -0.91
SCN9A-205ENST00000454569 POU2F3Q9UKI9 436 aa9.36□□□□□ -0.91
SCN9A-205ENST00000454569 RNF115Q9Y4L5 304 aa9.36□□□□□ -0.91
SCN9A-205ENST00000454569 SPEF1Q9Y4P9 236 aa9.36□□□□□ -0.91
SCN9A-205ENST00000454569 FBN2P35556 2912 aa9.35□□□□□ -0.91
SCN9A-205ENST00000454569 ZSCAN5BA6NJL1 495 aa9.35□□□□□ -0.91
SCN9A-205ENST00000454569 TIMM8AO60220 97 aaPredicted RBP9.35□□□□□ -0.91
SCN9A-205ENST00000454569 PAHP00439 452 aa9.35□□□□□ -0.91
SCN9A-205ENST00000454569 RAB3AP20336 220 aa9.35□□□□□ -0.91
SCN9A-205ENST00000454569 AZGP1P25311 298 aaKnown RBP9.35□□□□□ -0.91
SCN9A-205ENST00000454569 BDKRB2P30411 391 aa9.35□□□□□ -0.91
SCN9A-205ENST00000454569 GCH1P30793 250 aa9.35□□□□□ -0.91
SCN9A-205ENST00000454569 ALDH3B1P43353 468 aa9.35□□□□□ -0.91
SCN9A-205ENST00000454569 HOXA4Q00056 320 aaPredicted RBP9.35□□□□□ -0.91
SCN9A-205ENST00000454569 FAM166AQ6J272 317 aa9.35□□□□□ -0.91
SCN9A-205ENST00000454569 METAP1DQ6UB28 335 aaPredicted RBP9.35□□□□□ -0.91
SCN9A-205ENST00000454569 C1QL2Q7Z5L3 287 aa9.35□□□□□ -0.91
SCN9A-205ENST00000454569 TPRA1Q86W33 373 aa9.35□□□□□ -0.91
SCN9A-205ENST00000454569 ANGPTL5Q86XS5 388 aa9.35□□□□□ -0.91
SCN9A-205ENST00000454569 OR8G5Q8NG78 346 aa9.35□□□□□ -0.91
SCN9A-205ENST00000454569 OR10AD1Q8NGE0 317 aa9.35□□□□□ -0.91
SCN9A-205ENST00000454569 OR4D6Q8NGJ1 314 aa9.35□□□□□ -0.91
SCN9A-205ENST00000454569 FAM222BQ8WU58 562 aa9.35□□□□□ -0.91
SCN9A-205ENST00000454569 S100ZQ8WXG8 99 aa9.35□□□□□ -0.91
SCN9A-205ENST00000454569 PP6455Q8WZ26 134 aa9.35□□□□□ -0.91
SCN9A-205ENST00000454569 AP3S1Q92572 193 aa9.35□□□□□ -0.91
SCN9A-205ENST00000454569 THRSPQ92748 146 aa9.35□□□□□ -0.91
SCN9A-205ENST00000454569 SLC25A28Q96A46 364 aa9.35□□□□□ -0.91
SCN9A-205ENST00000454569 CYYR1Q96J86 154 aa9.35□□□□□ -0.91
SCN9A-205ENST00000454569 SMURF1Q9HCE7 757 aa9.35□□□□□ -0.91
SCN9A-205ENST00000454569 HMG20AQ9NP66 347 aa9.35□□□□□ -0.91
SCN9A-205ENST00000454569 CISD1Q9NZ45 108 aaKnown RBP9.35□□□□□ -0.91
SCN9A-205ENST00000454569 KCNN3Q9UGI6 736 aa9.35□□□□□ -0.91
SCN9A-205ENST00000454569 CMAHPQ9Y471 501 aa9.35□□□□□ -0.91
SCN9A-205ENST00000454569 KLF2Q9Y5W3 355 aaPredicted RBP9.35□□□□□ -0.91
SCN9A-205ENST00000454569 V9GY05 133 aa9.35□□□□□ -0.91
SCN9A-205ENST00000454569 USF3Q68DE3 2245 aa9.35□□□□□ -0.91
SCN9A-205ENST00000454569 LOC100289279A0A1B0GTE1 492 aa9.34□□□□□ -0.91
SCN9A-205ENST00000454569 FAM230AA0A1W2PPH8 454 aa9.34□□□□□ -0.91
SCN9A-205ENST00000454569 F5H5P2 479 aa9.34□□□□□ -0.91
SCN9A-205ENST00000454569 PRF1P14222 555 aa9.34□□□□□ -0.91
SCN9A-205ENST00000454569 OR3A4PP47883 348 aa9.34□□□□□ -0.91
SCN9A-205ENST00000454569 KLF3P57682 345 aaPredicted RBP9.34□□□□□ -0.91
SCN9A-205ENST00000454569 DYNC1I2Q13409 638 aaKnown RBP9.34□□□□□ -0.91
SCN9A-205ENST00000454569 DAZAP2Q15038 168 aaPredicted RBP9.34□□□□□ -0.91
SCN9A-205ENST00000454569 ZNF672Q499Z4 452 aaPredicted RBP9.34□□□□□ -0.91
SCN9A-205ENST00000454569 ZBTB37Q5TC79 503 aa9.34□□□□□ -0.91
SCN9A-205ENST00000454569 DDI2Q5TDH0 399 aa9.34□□□□□ -0.91
SCN9A-205ENST00000454569 PLCXD3Q63HM9 321 aa9.34□□□□□ -0.91
SCN9A-205ENST00000454569 SP5Q6BEB4 398 aaPredicted RBP9.34□□□□□ -0.91
SCN9A-205ENST00000454569 SFXN4Q6P4A7 337 aa9.34□□□□□ -0.91
SCN9A-205ENST00000454569 CALHM1Q8IU99 346 aa9.34□□□□□ -0.91
SCN9A-205ENST00000454569 CCDC54Q8NEL0 328 aa9.34□□□□□ -0.91
SCN9A-205ENST00000454569 CSNK2A3Q8NEV1 391 aa9.34□□□□□ -0.91
SCN9A-205ENST00000454569 OR5D18Q8NGL1 313 aa9.34□□□□□ -0.91
SCN9A-205ENST00000454569 OR5H6Q8NGV6 325 aa9.34□□□□□ -0.91
SCN9A-205ENST00000454569 OR5P3Q8WZ94 311 aa9.34□□□□□ -0.91
SCN9A-205ENST00000454569 C10orf35Q96D05 121 aa9.34□□□□□ -0.91
SCN9A-205ENST00000454569 OPA3Q9H6K4 179 aa9.34□□□□□ -0.91
SCN9A-205ENST00000454569 ZNF442Q9H7R0 627 aa9.34□□□□□ -0.91
SCN9A-205ENST00000454569 CNTD2Q9H8S5 307 aa9.34□□□□□ -0.91
SCN9A-205ENST00000454569 TMEM138Q9NPI0 162 aa9.34□□□□□ -0.91
SCN9A-205ENST00000454569 TAAR3PQ9P1P4 343 aa9.34□□□□□ -0.91
SCN9A-205ENST00000454569 DAPK2Q9UIK4 370 aa9.34□□□□□ -0.91
SCN9A-205ENST00000454569 PEX16Q9Y5Y5 336 aa9.34□□□□□ -0.91
SCN9A-205ENST00000454569 A0A075B6Q4 140 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 IFITM5A6NNB3 132 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 A6NNC1 897 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 ANKRD30BLA7E2S9 258 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 CLDN25C9JDP6 229 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 CTDSP2O14595 271 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 RGS5O15539 181 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 ALX3O95076 343 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 HCKP08631 526 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 INHBBP09529 407 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 NAT2P11245 290 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 SNRPBP14678 240 aaKnown RBP9.33□□□□□ -0.92
SCN9A-205ENST00000454569 TUBG1P23258 451 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 GPM6AP51674 278 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 BMXP51813 675 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 MAB21L1Q13394 359 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 ZNF846Q147U1 533 aa9.33□□□□□ -0.92
SCN9A-205ENST00000454569 P2RY14Q15391 338 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms