RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 KDELR2P33947 212 aa2.73□□□□□ -1.97
HMGN3P1-201ENST00000453847 RGS19P49795 217 aa2.73□□□□□ -1.97
HMGN3P1-201ENST00000453847 TAF6P49848 677 aa2.73□□□□□ -1.97
HMGN3P1-201ENST00000453847 WNT4P56705 351 aa2.73□□□□□ -1.97
HMGN3P1-201ENST00000453847 TSPAN5P62079 268 aa2.73□□□□□ -1.97
HMGN3P1-201ENST00000453847 ESRRGP62508 458 aa2.73□□□□□ -1.97
HMGN3P1-201ENST00000453847 TPM4P67936 248 aa2.73□□□□□ -1.97
HMGN3P1-201ENST00000453847 PNOCQ13519 176 aa2.73□□□□□ -1.97
HMGN3P1-201ENST00000453847 IRF4Q15306 451 aa2.73□□□□□ -1.97
HMGN3P1-201ENST00000453847 CEACAM16Q2WEN9 425 aa2.73□□□□□ -1.97
HMGN3P1-201ENST00000453847 OPN5Q6U736 354 aa2.73□□□□□ -1.97
HMGN3P1-201ENST00000453847 SLC16A13Q7RTY0 426 aa2.73□□□□□ -1.97
HMGN3P1-201ENST00000453847 LYG1Q8N1E2 194 aa2.73□□□□□ -1.97
HMGN3P1-201ENST00000453847 LINC00337Q8N6G1 96 aa2.73□□□□□ -1.97
HMGN3P1-201ENST00000453847 ARIH2OSQ8N7S6 290 aa2.73□□□□□ -1.97
HMGN3P1-201ENST00000453847 RNASEH2CQ8TDP1 164 aaKnown RBP2.73□□□□□ -1.97
HMGN3P1-201ENST00000453847 DDI1Q8WTU0 396 aa2.73□□□□□ -1.97
HMGN3P1-201ENST00000453847 TM4SF18Q96CE8 201 aa2.73□□□□□ -1.97
HMGN3P1-201ENST00000453847 FLYWCH2Q96CP2 140 aaKnown RBP2.73□□□□□ -1.97
HMGN3P1-201ENST00000453847 BMFQ96LC9 184 aa2.73□□□□□ -1.97
HMGN3P1-201ENST00000453847 Q96MT0 163 aa2.73□□□□□ -1.97
HMGN3P1-201ENST00000453847 VAT1Q99536 393 aa2.73□□□□□ -1.97
HMGN3P1-201ENST00000453847 RBBP8Q99708 897 aa2.73□□□□□ -1.97
HMGN3P1-201ENST00000453847 HSD17B10Q99714 261 aaKnown RBP2.73□□□□□ -1.97
HMGN3P1-201ENST00000453847 SFXN3Q9BWM7 321 aa2.73□□□□□ -1.97
HMGN3P1-201ENST00000453847 TOLLIPQ9H0E2 274 aa2.73□□□□□ -1.97
HMGN3P1-201ENST00000453847 C6orf50Q9HD87 102 aa2.73□□□□□ -1.97
HMGN3P1-201ENST00000453847 C12orf4Q9NQ89 552 aa2.73□□□□□ -1.97
HMGN3P1-201ENST00000453847 IMP3Q9NV31 184 aaKnown RBP2.73□□□□□ -1.97
HMGN3P1-201ENST00000453847 RPS6KB2Q9UBS0 482 aa2.73□□□□□ -1.97
HMGN3P1-201ENST00000453847 ANXA10Q9UJ72 324 aa2.73□□□□□ -1.97
HMGN3P1-201ENST00000453847 KIAA0232Q92628 1395 aa2.73□□□□□ -1.97
HMGN3P1-201ENST00000453847 ABCB11O95342 1321 aa2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 USP42Q9H9J4 1324 aaKnown RBP2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 COL2A1P02458 1487 aaPredicted RBP2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 NUP153P49790 1475 aaKnown RBP2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 TRBV6-6A0A0A6YYG2 114 aa2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 ITGB1BP1O14713 200 aa2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 TAAR5O14804 337 aa2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 AQP9O43315 295 aa2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 ZNF207O43670 478 aaKnown RBP2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 ADAP1O75689 374 aa2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 IGKV5-2P06315 115 aa2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 MMP7P09237 267 aaPredicted RBP2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 GIMD1P0DJR0 217 aa2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 TALDO1P37837 337 aa2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 KRTAP10-9P60411 292 aa2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 RAP1AP62834 184 aa2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 CDK5Q00535 292 aa2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 PRKCDQ05655 676 aa2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 KDSRQ06136 332 aa2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 LOXL1Q08397 574 aaPredicted RBP2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 SYCNQ0VAF6 134 aa2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 PIGHQ14442 188 aaPredicted RBP2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 MPPED2Q15777 294 aa2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 TOMM34Q15785 309 aaPredicted RBP2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 BSXQ3C1V8 233 aa2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 TTC32Q5I0X7 151 aa2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 OR10J3Q5JRS4 329 aa2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 SYT6Q5T7P8 510 aaPredicted RBP2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 CYB5R2Q6BCY4 276 aa2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 Q6ZR03 302 aa2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 LRRC6Q86X45 466 aa2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 WDFY1Q8IWB7 410 aa2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 SPICQ8N5J4 248 aa2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 DRAM1Q8N682 238 aa2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 ZNF738Q8NE65 137 aa2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 OR5W2Q8NH69 310 aa2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 UBA3Q8TBC4 463 aa2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 NT5CQ8TCD5 201 aa2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 SFXN5Q8TD22 340 aa2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 DOK4Q8TEW6 326 aa2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 ING5Q8WYH8 240 aa2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 RERGQ96A58 199 aaPredicted RBP2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 ZNF414Q96IQ9 312 aa2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 TPK1Q9H3S4 243 aa2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 PLEKHF2Q9H8W4 249 aa2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 ZNF331Q9NQX6 463 aaPredicted RBP2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 C8orf17Q9NRJ1 99 aa2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 RAB23Q9ULC3 237 aa2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 SLC7A11Q9UPY5 501 aa2.72□□□□□ -1.97
HMGN3P1-201ENST00000453847 IGHV3-72A0A0B4J1Y9 119 aa2.71□□□□□ -1.98
HMGN3P1-201ENST00000453847 IGHV1OR15-9A0A0B4J2B8 117 aa2.71□□□□□ -1.98
HMGN3P1-201ENST00000453847 TMEM213A2RRL7 107 aa2.71□□□□□ -1.98
HMGN3P1-201ENST00000453847 FABP12A6NFH5 140 aa2.71□□□□□ -1.98
HMGN3P1-201ENST00000453847 H0YJW9 148 aa2.71□□□□□ -1.98
HMGN3P1-201ENST00000453847 J3QLI3 93 aa2.71□□□□□ -1.98
HMGN3P1-201ENST00000453847 SULT1C2O00338 296 aa2.71□□□□□ -1.98
HMGN3P1-201ENST00000453847 SLC22A5O76082 557 aa2.71□□□□□ -1.98
HMGN3P1-201ENST00000453847 IGHV1-8P0DP01 117 aa2.71□□□□□ -1.98
HMGN3P1-201ENST00000453847 DTYMKP23919 212 aa2.71□□□□□ -1.98
HMGN3P1-201ENST00000453847 CD164Q04900 197 aa2.71□□□□□ -1.98
HMGN3P1-201ENST00000453847 RAB31Q13636 194 aa2.71□□□□□ -1.98
HMGN3P1-201ENST00000453847 MPV17L2Q567V2 206 aa2.71□□□□□ -1.98
HMGN3P1-201ENST00000453847 TIMM23BQ5SRD1 257 aa2.71□□□□□ -1.98
HMGN3P1-201ENST00000453847 LCE3CQ5T5A8 94 aa2.71□□□□□ -1.98
HMGN3P1-201ENST00000453847 HHATQ5VTY9 493 aa2.71□□□□□ -1.98
HMGN3P1-201ENST00000453847 SAXO2Q658L1 398 aa2.71□□□□□ -1.98
HMGN3P1-201ENST00000453847 TRMT10CQ7L0Y3 403 aaKnown RBP2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms