RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 G6PC2Q9NQR9 355 aa15.23■□□□□ 0.03
SQSTM1-204ENST00000453046 FRRS1LQ9P0K9 344 aa15.23■□□□□ 0.03
SQSTM1-204ENST00000453046 NUFIP1Q9UHK0 495 aaKnown RBP15.23■□□□□ 0.03
SQSTM1-204ENST00000453046 OR52A1Q9UKL2 312 aa15.23■□□□□ 0.03
SQSTM1-204ENST00000453046 SSR3Q9UNL2 185 aa15.23■□□□□ 0.03
SQSTM1-204ENST00000453046 ZNF281Q9Y2X9 895 aa15.23■□□□□ 0.03
SQSTM1-204ENST00000453046 STARD10Q9Y365 291 aa15.23■□□□□ 0.03
SQSTM1-204ENST00000453046 FBN3Q75N90 2809 aa15.22■□□□□ 0.03
SQSTM1-204ENST00000453046 TRDV1A0A1B0GX56 115 aa15.22■□□□□ 0.03
SQSTM1-204ENST00000453046 H3BMQ9 156 aa15.22■□□□□ 0.03
SQSTM1-204ENST00000453046 SLC22A1O15245 554 aa15.22■□□□□ 0.03
SQSTM1-204ENST00000453046 ZFPL1O95159 310 aa15.22■□□□□ 0.03
SQSTM1-204ENST00000453046 PNPP00491 289 aa15.22■□□□□ 0.03
SQSTM1-204ENST00000453046 SERPINA3P01011 423 aa15.22■□□□□ 0.03
SQSTM1-204ENST00000453046 UBCP0CG48 685 aaKnown RBP15.22■□□□□ 0.03
SQSTM1-204ENST00000453046 PRKXP51817 358 aa15.22■□□□□ 0.03
SQSTM1-204ENST00000453046 TPTEP56180 551 aa15.22■□□□□ 0.03
SQSTM1-204ENST00000453046 ZNF121P58317 390 aaPredicted RBP15.22■□□□□ 0.03
SQSTM1-204ENST00000453046 SCGB2A2Q13296 93 aa15.22■□□□□ 0.03
SQSTM1-204ENST00000453046 OR5AK2Q8NH90 309 aa15.22■□□□□ 0.03
SQSTM1-204ENST00000453046 SLC7A6Q92536 515 aa15.22■□□□□ 0.03
SQSTM1-204ENST00000453046 THRSPQ92748 146 aa15.22■□□□□ 0.03
SQSTM1-204ENST00000453046 C12orf43Q96C57 262 aaKnown RBP15.22■□□□□ 0.03
SQSTM1-204ENST00000453046 CMBLQ96DG6 245 aa15.22■□□□□ 0.03
SQSTM1-204ENST00000453046 DCLRE1CQ96SD1 692 aaKnown RBP15.22■□□□□ 0.03
SQSTM1-204ENST00000453046 PDCD1LG2Q9BQ51 273 aa15.22■□□□□ 0.03
SQSTM1-204ENST00000453046 CHCHD6Q9BRQ6 235 aa15.22■□□□□ 0.03
SQSTM1-204ENST00000453046 OR51E2Q9H255 320 aa15.22■□□□□ 0.03
SQSTM1-204ENST00000453046 POFUT1Q9H488 388 aa15.22■□□□□ 0.03
SQSTM1-204ENST00000453046 PURGQ9UJV8 347 aaKnown RBP15.22■□□□□ 0.03
SQSTM1-204ENST00000453046 GPX5O75715 221 aa15.21■□□□□ 0.03
SQSTM1-204ENST00000453046 IGHV2-5P01817 119 aa15.21■□□□□ 0.03
SQSTM1-204ENST00000453046 CD55P08174 381 aa15.21■□□□□ 0.03
SQSTM1-204ENST00000453046 TNFRSF1AP19438 455 aa15.21■□□□□ 0.03
SQSTM1-204ENST00000453046 FGF9P31371 208 aaPredicted RBP15.21■□□□□ 0.03
SQSTM1-204ENST00000453046 SLC6A9P48067 706 aa15.21■□□□□ 0.03
SQSTM1-204ENST00000453046 ELMOD2Q8IZ81 293 aa15.21■□□□□ 0.03
SQSTM1-204ENST00000453046 TEX29Q8N6K0 151 aa15.21■□□□□ 0.03
SQSTM1-204ENST00000453046 ZNF676Q8N7Q3 588 aa15.21■□□□□ 0.03
SQSTM1-204ENST00000453046 OR2Z1Q8NG97 314 aa15.21■□□□□ 0.03
SQSTM1-204ENST00000453046 RPL3LQ92901 407 aaKnown RBP15.21■□□□□ 0.03
SQSTM1-204ENST00000453046 TMEM203Q969S6 136 aa15.21■□□□□ 0.03
SQSTM1-204ENST00000453046 PBOV1Q9GZY1 135 aa15.21■□□□□ 0.03
SQSTM1-204ENST00000453046 SP140LQ9H930 580 aa15.21■□□□□ 0.03
SQSTM1-204ENST00000453046 EXOSC4Q9NPD3 245 aaKnown RBP15.21■□□□□ 0.03
SQSTM1-204ENST00000453046 GTF2A1LQ9UNN4 478 aa15.21■□□□□ 0.03
SQSTM1-204ENST00000453046 A0A0G2JMP0 313 aa15.2■□□□□ 0.02
SQSTM1-204ENST00000453046 LOC100506127A0A0U1RQW1 187 aa15.2■□□□□ 0.02
SQSTM1-204ENST00000453046 A0A0X1KG70 313 aa15.2■□□□□ 0.02
SQSTM1-204ENST00000453046 F5H5K5 113 aa15.2■□□□□ 0.02
SQSTM1-204ENST00000453046 GABRPO00591 440 aa15.2■□□□□ 0.02
SQSTM1-204ENST00000453046 SC5DO75845 299 aa15.2■□□□□ 0.02
SQSTM1-204ENST00000453046 ISG15P05161 165 aa15.2■□□□□ 0.02
SQSTM1-204ENST00000453046 ANXA2P07355 339 aaKnown RBP15.2■□□□□ 0.02
SQSTM1-204ENST00000453046 ACSM4P0C7M7 580 aa15.2■□□□□ 0.02
SQSTM1-204ENST00000453046 KITLGP21583 273 aa15.2■□□□□ 0.02
SQSTM1-204ENST00000453046 FABP5Q01469 135 aa15.2■□□□□ 0.02
SQSTM1-204ENST00000453046 PRSS45Q7RTY3 260 aa15.2■□□□□ 0.02
SQSTM1-204ENST00000453046 OR4M2Q8NGB6 313 aa15.2■□□□□ 0.02
SQSTM1-204ENST00000453046 OR8B12Q8NGG6 310 aa15.2■□□□□ 0.02
SQSTM1-204ENST00000453046 OR52H1Q8NGJ2 320 aa15.2■□□□□ 0.02
SQSTM1-204ENST00000453046 OR5L1Q8NGL2 311 aa15.2■□□□□ 0.02
SQSTM1-204ENST00000453046 RGP1Q92546 391 aaPredicted RBP15.2■□□□□ 0.02
SQSTM1-204ENST00000453046 PHYHIPQ92561 330 aa15.2■□□□□ 0.02
SQSTM1-204ENST00000453046 HAVCR1Q96D42 359 aa15.2■□□□□ 0.02
SQSTM1-204ENST00000453046 GSTK1Q9Y2Q3 226 aa15.2■□□□□ 0.02
SQSTM1-204ENST00000453046 GATBO75879 557 aaKnown RBP15.19■□□□□ 0.02
SQSTM1-204ENST00000453046 TTRP02766 147 aa15.19■□□□□ 0.02
SQSTM1-204ENST00000453046 DBHP09172 617 aa15.19■□□□□ 0.02
SQSTM1-204ENST00000453046 MAPK3P27361 379 aaPredicted RBP15.19■□□□□ 0.02
SQSTM1-204ENST00000453046 RPS11P62280 158 aaKnown RBP eCLIP15.19■□□□□ 0.02
SQSTM1-204ENST00000453046 RSPO1Q2MKA7 263 aaPredicted RBP15.19■□□□□ 0.02
SQSTM1-204ENST00000453046 SPRNQ5BIV9 151 aa15.19■□□□□ 0.02
SQSTM1-204ENST00000453046 TMEM244Q5VVB8 128 aa15.19■□□□□ 0.02
SQSTM1-204ENST00000453046 DCAF12L2Q5VW00 463 aa15.19■□□□□ 0.02
SQSTM1-204ENST00000453046 GPR148Q8TDV2 347 aa15.19■□□□□ 0.02
SQSTM1-204ENST00000453046 CENPOQ9BU64 300 aa15.19■□□□□ 0.02
SQSTM1-204ENST00000453046 TXNL4BQ9NX01 149 aaKnown RBP15.19■□□□□ 0.02
SQSTM1-204ENST00000453046 PTTG3PQ9NZH4 202 aa15.19■□□□□ 0.02
SQSTM1-204ENST00000453046 PCDHB10Q9UN67 800 aa15.19■□□□□ 0.02
SQSTM1-204ENST00000453046 SLC22A13Q9Y226 551 aa15.19■□□□□ 0.02
SQSTM1-204ENST00000453046 NPTNQ9Y639 398 aa15.19■□□□□ 0.02
SQSTM1-204ENST00000453046 TRBV5-5A0A0J9YX44 114 aa15.18■□□□□ 0.02
SQSTM1-204ENST00000453046 A0A0U1RQV5 110 aa15.18■□□□□ 0.02
SQSTM1-204ENST00000453046 LOC107986453A0A1B0GWG9 222 aa15.18■□□□□ 0.02
SQSTM1-204ENST00000453046 J3QW42 95 aa15.18■□□□□ 0.02
SQSTM1-204ENST00000453046 SLC2A1P11166 492 aa15.18■□□□□ 0.02
SQSTM1-204ENST00000453046 RAC2P15153 192 aa15.18■□□□□ 0.02
SQSTM1-204ENST00000453046 NCS1P62166 190 aa15.18■□□□□ 0.02
SQSTM1-204ENST00000453046 Q499Y3 187 aa15.18■□□□□ 0.02
SQSTM1-204ENST00000453046 FAM57BQ71RH2 274 aa15.18■□□□□ 0.02
SQSTM1-204ENST00000453046 OR5AS1Q8N127 324 aa15.18■□□□□ 0.02
SQSTM1-204ENST00000453046 APOBEC3DQ96AK3 386 aaPredicted RBP15.18■□□□□ 0.02
SQSTM1-204ENST00000453046 PGAM5Q96HS1 289 aa15.18■□□□□ 0.02
SQSTM1-204ENST00000453046 OR10A2Q9H208 303 aa15.18■□□□□ 0.02
SQSTM1-204ENST00000453046 BRD7Q9NPI1 651 aa15.18■□□□□ 0.02
SQSTM1-204ENST00000453046 TMEM106BQ9NUM4 274 aa15.18■□□□□ 0.02
SQSTM1-204ENST00000453046 IL19Q9UHD0 177 aa15.18■□□□□ 0.02
SQSTM1-204ENST00000453046 ZNF391Q9UJN7 358 aa15.18■□□□□ 0.02
SQSTM1-204ENST00000453046 HHLA2Q9UM44 414 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms