RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 TMEM210A6NLX4 147 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 SULT1B1O43704 296 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 CD36P16671 472 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 IGFBP3P17936 291 aaPredicted RBP9.82□□□□□ -0.84
SCN9A-204ENST00000452182 ATF1P18846 271 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 FGF9P31371 208 aaPredicted RBP9.82□□□□□ -0.84
SCN9A-204ENST00000452182 CRYBB2P43320 205 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 EFNA4P52798 201 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 GNG3P63215 75 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 CCL8P80075 99 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 CEP78Q5JTW2 689 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 PLCXD3Q63HM9 321 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 MOB3CQ70IA8 216 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 CEACAM19Q7Z692 300 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 LRRC75A-AS1Q8N1F1 130 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 ERGIC1Q969X5 290 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 YIPF6Q96EC8 236 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 MEGF10Q96KG7 1140 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 OR2V2Q96R30 315 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 SAP30LQ9HAJ7 183 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 NEK6Q9HC98 313 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 GPR173Q9NS66 373 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 DECR2Q9NUI1 292 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 FOXJ3Q9UPW0 622 aa9.82□□□□□ -0.84
SCN9A-204ENST00000452182 ITPR2Q14571 2701 aa9.81□□□□□ -0.84
SCN9A-204ENST00000452182 IGKV1-9A0A0C4DH69 117 aa9.81□□□□□ -0.84
SCN9A-204ENST00000452182 PQLC2LA1A4F0 135 aa9.81□□□□□ -0.84
SCN9A-204ENST00000452182 GABRPO00591 440 aa9.81□□□□□ -0.84
SCN9A-204ENST00000452182 PIN1P1O15428 100 aa9.81□□□□□ -0.84
SCN9A-204ENST00000452182 ARL6IP5O75915 188 aa9.81□□□□□ -0.84
SCN9A-204ENST00000452182 NCR1O76036 304 aa9.81□□□□□ -0.84
SCN9A-204ENST00000452182 RAB3AP20336 220 aa9.81□□□□□ -0.84
SCN9A-204ENST00000452182 PRKACBP22694 351 aa9.81□□□□□ -0.84
SCN9A-204ENST00000452182 RPL5P46777 297 aaKnown RBP9.81□□□□□ -0.84
SCN9A-204ENST00000452182 FUT6P51993 359 aa9.81□□□□□ -0.84
SCN9A-204ENST00000452182 INSL4Q14641 139 aa9.81□□□□□ -0.84
SCN9A-204ENST00000452182 DEFB113Q30KQ7 82 aa9.81□□□□□ -0.84
SCN9A-204ENST00000452182 TIMM50Q3ZCQ8 353 aa9.81□□□□□ -0.84
SCN9A-204ENST00000452182 GDPGP1Q6ZNW5 385 aa9.81□□□□□ -0.84
SCN9A-204ENST00000452182 OR13C9Q8NGT0 318 aa9.81□□□□□ -0.84
SCN9A-204ENST00000452182 DVL3Q92997 716 aaPredicted RBP9.81□□□□□ -0.84
SCN9A-204ENST00000452182 RNF170Q96K19 258 aa9.81□□□□□ -0.84
SCN9A-204ENST00000452182 FGF23Q9GZV9 251 aaPredicted RBP9.81□□□□□ -0.84
SCN9A-204ENST00000452182 TLNRD1Q9H1K6 362 aa9.81□□□□□ -0.84
SCN9A-204ENST00000452182 BARX1Q9HBU1 254 aaPredicted RBP9.81□□□□□ -0.84
SCN9A-204ENST00000452182 NOX4Q9NPH5 578 aa9.81□□□□□ -0.84
SCN9A-204ENST00000452182 TAS2R4Q9NYW5 299 aa9.81□□□□□ -0.84
SCN9A-204ENST00000452182 SLC7A11Q9UPY5 501 aa9.81□□□□□ -0.84
SCN9A-204ENST00000452182 TANC2Q9HCD6 1990 aa9.81□□□□□ -0.84
SCN9A-204ENST00000452182 AKAP6Q13023 2319 aa9.81□□□□□ -0.84
SCN9A-204ENST00000452182 PDZD2O15018 2839 aa9.8□□□□□ -0.84
SCN9A-204ENST00000452182 SPG11Q96JI7 2443 aa9.8□□□□□ -0.84
SCN9A-204ENST00000452182 HPXP02790 462 aa9.8□□□□□ -0.84
SCN9A-204ENST00000452182 ALDOBP05062 364 aa9.8□□□□□ -0.84
SCN9A-204ENST00000452182 AZGP1P25311 298 aaKnown RBP9.8□□□□□ -0.84
SCN9A-204ENST00000452182 THBS2P35442 1172 aa9.8□□□□□ -0.84
SCN9A-204ENST00000452182 PTH2RP49190 550 aa9.8□□□□□ -0.84
SCN9A-204ENST00000452182 GPM6AP51674 278 aa9.8□□□□□ -0.84
SCN9A-204ENST00000452182 PPP3R1P63098 170 aa9.8□□□□□ -0.84
SCN9A-204ENST00000452182 HSD17B12Q53GQ0 312 aa9.8□□□□□ -0.84
SCN9A-204ENST00000452182 WDR86Q86TI4 376 aa9.8□□□□□ -0.84
SCN9A-204ENST00000452182 CDH24Q86UP0 819 aa9.8□□□□□ -0.84
SCN9A-204ENST00000452182 OR1M1Q8NGA1 313 aa9.8□□□□□ -0.84
SCN9A-204ENST00000452182 Q8TCH9 128 aa9.8□□□□□ -0.84
SCN9A-204ENST00000452182 ITLN1Q8WWA0 313 aa9.8□□□□□ -0.84
SCN9A-204ENST00000452182 OR51I2Q9H344 312 aa9.8□□□□□ -0.84
SCN9A-204ENST00000452182 GCM1Q9NP62 436 aa9.8□□□□□ -0.84
SCN9A-204ENST00000452182 MYOZ1Q9NP98 299 aaPredicted RBP9.8□□□□□ -0.84
SCN9A-204ENST00000452182 TMEM138Q9NPI0 162 aa9.8□□□□□ -0.84
SCN9A-204ENST00000452182 SSR3Q9UNL2 185 aa9.8□□□□□ -0.84
SCN9A-204ENST00000452182 ANKRD17O75179 2603 aaKnown RBP9.79□□□□□ -0.84
SCN9A-204ENST00000452182 TRAV8-7A0A075B6U6 113 aa9.79□□□□□ -0.84
SCN9A-204ENST00000452182 A0A1W2PPK0 400 aa9.79□□□□□ -0.84
SCN9A-204ENST00000452182 LRP5LA4QPB2 252 aa9.79□□□□□ -0.84
SCN9A-204ENST00000452182 A6NJY4 79 aa9.79□□□□□ -0.84
SCN9A-204ENST00000452182 ZNF732B4DXR9 585 aa9.79□□□□□ -0.84
SCN9A-204ENST00000452182 IFNL4K9M1U5 179 aa9.79□□□□□ -0.84
SCN9A-204ENST00000452182 TPD52L2O43399 206 aaKnown RBP9.79□□□□□ -0.84
SCN9A-204ENST00000452182 IGHV4-39P01824 125 aa9.79□□□□□ -0.84
SCN9A-204ENST00000452182 SRMP19623 302 aa9.79□□□□□ -0.84
SCN9A-204ENST00000452182 RBP2P50120 134 aa9.79□□□□□ -0.84
SCN9A-204ENST00000452182 ATP5J2P56134 94 aa9.79□□□□□ -0.84
SCN9A-204ENST00000452182 ZNF154Q13106 437 aa9.79□□□□□ -0.84
SCN9A-204ENST00000452182 ZNF181Q2M3W8 571 aa9.79□□□□□ -0.84
SCN9A-204ENST00000452182 SPRNQ5BIV9 151 aa9.79□□□□□ -0.84
SCN9A-204ENST00000452182 FAM27D1Q5T7N8 215 aa9.79□□□□□ -0.84
SCN9A-204ENST00000452182 LHFPL2Q6ZUX7 228 aa9.79□□□□□ -0.84
SCN9A-204ENST00000452182 ZNF573Q86YE8 665 aa9.79□□□□□ -0.84
SCN9A-204ENST00000452182 CDH26Q8IXH8 852 aa9.79□□□□□ -0.84
SCN9A-204ENST00000452182 RDH5Q92781 318 aa9.79□□□□□ -0.84
SCN9A-204ENST00000452182 TMIGD2Q96BF3 282 aa9.79□□□□□ -0.84
SCN9A-204ENST00000452182 ORAI1Q96D31 301 aa9.79□□□□□ -0.84
SCN9A-204ENST00000452182 BORCS8Q96FH0 119 aa9.79□□□□□ -0.84
SCN9A-204ENST00000452182 CPNE2Q96FN4 548 aaPredicted RBP9.79□□□□□ -0.84
SCN9A-204ENST00000452182 PPIL3Q9H2H8 161 aaKnown RBP9.79□□□□□ -0.84
SCN9A-204ENST00000452182 DLL4Q9NR61 685 aa9.79□□□□□ -0.84
SCN9A-204ENST00000452182 TXNL4BQ9NX01 149 aaKnown RBP9.79□□□□□ -0.84
SCN9A-204ENST00000452182 TRAV1-2A0A0B4J238 106 aa9.78□□□□□ -0.84
SCN9A-204ENST00000452182 IGHV1-69-2A0A0G2JMI3 117 aa9.78□□□□□ -0.84
SCN9A-204ENST00000452182 MEGF11A6BM72 1044 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms