RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 SPG11Q96JI7 2443 aa7.5□□□□□ -1.21
COL8A1-203ENST00000452013 CREBBPQ92793 2442 aa7.49□□□□□ -1.21
COL8A1-203ENST00000452013 PRRC2AP48634 2157 aaKnown RBP7.49□□□□□ -1.21
COL8A1-203ENST00000452013 A0A075B6Q4 140 aa7.49□□□□□ -1.21
COL8A1-203ENST00000452013 PPIAL4EA0A075B759 164 aa7.49□□□□□ -1.21
COL8A1-203ENST00000452013 ZNF816-ZNF321PA0A0X1KG74 233 aa7.49□□□□□ -1.21
COL8A1-203ENST00000452013 LOC100289279A0A1B0GTE1 492 aa7.49□□□□□ -1.21
COL8A1-203ENST00000452013 A0A1B0GVI7 797 aa7.49□□□□□ -1.21
COL8A1-203ENST00000452013 ZNF850A8MQ14 1090 aa7.49□□□□□ -1.21
COL8A1-203ENST00000452013 A8MV72 311 aaPredicted RBP7.49□□□□□ -1.21
COL8A1-203ENST00000452013 B4DSR2 109 aa7.49□□□□□ -1.21
COL8A1-203ENST00000452013 PPIAL4DF5H284 164 aa7.49□□□□□ -1.21
COL8A1-203ENST00000452013 DHRS3O75911 302 aa7.49□□□□□ -1.21
COL8A1-203ENST00000452013 FSTL3O95633 263 aa7.49□□□□□ -1.21
COL8A1-203ENST00000452013 PTBP3O95758 552 aaKnown RBP7.49□□□□□ -1.21
COL8A1-203ENST00000452013 PTTG1O95997 202 aa7.49□□□□□ -1.21
COL8A1-203ENST00000452013 TGFAP01135 160 aa7.49□□□□□ -1.21
COL8A1-203ENST00000452013 IGLV3-1P01715 115 aa7.49□□□□□ -1.21
COL8A1-203ENST00000452013 TTRP02766 147 aa7.49□□□□□ -1.21
COL8A1-203ENST00000452013 PPIAL4FP0DN26 164 aa7.49□□□□□ -1.21
COL8A1-203ENST00000452013 IGHV4-31P0DP07 118 aa7.49□□□□□ -1.21
COL8A1-203ENST00000452013 ANOS1P23352 680 aa7.49□□□□□ -1.21
COL8A1-203ENST00000452013 DEFA1P59665 94 aa7.49□□□□□ -1.21
COL8A1-203ENST00000452013 DEFA3P59666 94 aa7.49□□□□□ -1.21
COL8A1-203ENST00000452013 MFGE8Q08431 387 aaPredicted RBP7.49□□□□□ -1.21
COL8A1-203ENST00000452013 PRDX4Q13162 271 aa7.49□□□□□ -1.21
COL8A1-203ENST00000452013 TMEM155Q4W5P6 130 aa7.49□□□□□ -1.21
COL8A1-203ENST00000452013 TMEM244Q5VVB8 128 aa7.49□□□□□ -1.21
COL8A1-203ENST00000452013 Q71RC1 249 aaPredicted RBP7.49□□□□□ -1.21
COL8A1-203ENST00000452013 KRT74Q7RTS7 529 aa7.49□□□□□ -1.21
COL8A1-203ENST00000452013 CATSPERDQ86XM0 798 aa7.49□□□□□ -1.21
COL8A1-203ENST00000452013 SYS1Q8N2H4 156 aa7.49□□□□□ -1.21
COL8A1-203ENST00000452013 MUC20Q8N307 709 aaPredicted RBP7.49□□□□□ -1.21
COL8A1-203ENST00000452013 MFSD4AQ8N468 514 aa7.49□□□□□ -1.21
COL8A1-203ENST00000452013 KLHL36Q8N4N3 616 aa7.49□□□□□ -1.21
COL8A1-203ENST00000452013 SPICQ8N5J4 248 aa7.49□□□□□ -1.21
COL8A1-203ENST00000452013 LINC01356Q8N9X3 169 aa7.49□□□□□ -1.21
COL8A1-203ENST00000452013 ZBTB8BQ8NAP8 495 aaPredicted RBP7.49□□□□□ -1.21
COL8A1-203ENST00000452013 OR52I1Q8NGK6 324 aa7.49□□□□□ -1.21
COL8A1-203ENST00000452013 Q8TCH9 128 aa7.49□□□□□ -1.21
COL8A1-203ENST00000452013 GGHQ92820 318 aa7.49□□□□□ -1.21
COL8A1-203ENST00000452013 C1orf159Q96HA4 380 aa7.49□□□□□ -1.21
COL8A1-203ENST00000452013 RNF170Q96K19 258 aa7.49□□□□□ -1.21
COL8A1-203ENST00000452013 GAL3ST1Q99999 423 aa7.49□□□□□ -1.21
COL8A1-203ENST00000452013 CCDC32Q9BV29 185 aa7.49□□□□□ -1.21
COL8A1-203ENST00000452013 RTL8AQ9BWD3 113 aa7.49□□□□□ -1.21
COL8A1-203ENST00000452013 PAPOLGQ9BWT3 736 aaKnown RBP7.49□□□□□ -1.21
COL8A1-203ENST00000452013 NARFLQ9H6Q4 476 aa7.49□□□□□ -1.21
COL8A1-203ENST00000452013 ISYNA1Q9NPH2 558 aa7.49□□□□□ -1.21
COL8A1-203ENST00000452013 UFSP2Q9NUQ7 469 aa7.49□□□□□ -1.21
COL8A1-203ENST00000452013 RNF7Q9UBF6 113 aa7.49□□□□□ -1.21
COL8A1-203ENST00000452013 PCDHB10Q9UN67 800 aa7.49□□□□□ -1.21
COL8A1-203ENST00000452013 SLC22A13Q9Y226 551 aa7.49□□□□□ -1.21
COL8A1-203ENST00000452013 PPIAL4AQ9Y536 164 aa7.49□□□□□ -1.21
COL8A1-203ENST00000452013 CSMD1Q96PZ7 3565 aa7.49□□□□□ -1.21
COL8A1-203ENST00000452013 PRR14LQ5THK1 2151 aa7.49□□□□□ -1.21
COL8A1-203ENST00000452013 hCG_2014768A0A024R1R8 64 aa7.48□□□□□ -1.21
COL8A1-203ENST00000452013 IGHV3-64DA0A0J9YX35 117 aa7.48□□□□□ -1.21
COL8A1-203ENST00000452013 A0A1B0GTI1 187 aa7.48□□□□□ -1.21
COL8A1-203ENST00000452013 A6NLC8 198 aa7.48□□□□□ -1.21
COL8A1-203ENST00000452013 TMEM210A6NLX4 147 aa7.48□□□□□ -1.21
COL8A1-203ENST00000452013 DHRS7CA6NNS2 312 aa7.48□□□□□ -1.21
COL8A1-203ENST00000452013 P2RY10O00398 339 aa7.48□□□□□ -1.21
COL8A1-203ENST00000452013 CCRL2O00421 344 aa7.48□□□□□ -1.21
COL8A1-203ENST00000452013 SYT7O43581 403 aa7.48□□□□□ -1.21
COL8A1-203ENST00000452013 DSCAMO60469 2012 aa7.48□□□□□ -1.21
COL8A1-203ENST00000452013 CYB5R3P00387 301 aaPredicted RBP7.48□□□□□ -1.21
COL8A1-203ENST00000452013 SERPINA3P01011 423 aa7.48□□□□□ -1.21
COL8A1-203ENST00000452013 IGHA1P01876 353 aa7.48□□□□□ -1.21
COL8A1-203ENST00000452013 UBCP0CG48 685 aaKnown RBP7.48□□□□□ -1.21
COL8A1-203ENST00000452013 MYL12AP19105 171 aa7.48□□□□□ -1.21
COL8A1-203ENST00000452013 ACKR3P25106 362 aa7.48□□□□□ -1.21
COL8A1-203ENST00000452013 PSMB10P40306 273 aa7.48□□□□□ -1.21
COL8A1-203ENST00000452013 MDH2P40926 338 aaKnown RBP7.48□□□□□ -1.21
COL8A1-203ENST00000452013 PMELP40967 661 aa7.48□□□□□ -1.21
COL8A1-203ENST00000452013 CCR9P51686 369 aa7.48□□□□□ -1.21
COL8A1-203ENST00000452013 GBX2P52951 348 aaPredicted RBP7.48□□□□□ -1.21
COL8A1-203ENST00000452013 OR12D2P58182 307 aa7.48□□□□□ -1.21
COL8A1-203ENST00000452013 LMO4P61968 165 aa7.48□□□□□ -1.21
COL8A1-203ENST00000452013 BTG1P62324 171 aa7.48□□□□□ -1.21
COL8A1-203ENST00000452013 MPPED2Q15777 294 aa7.48□□□□□ -1.21
COL8A1-203ENST00000452013 KCNJ8Q15842 424 aa7.48□□□□□ -1.21
COL8A1-203ENST00000452013 SMN1Q16637 294 aaKnown RBP7.48□□□□□ -1.21
COL8A1-203ENST00000452013 CEACAM21Q3KPI0 293 aa7.48□□□□□ -1.21
COL8A1-203ENST00000452013 PRAMEF6Q5VXH4 476 aa7.48□□□□□ -1.21
COL8A1-203ENST00000452013 FAM166AQ6J272 317 aa7.48□□□□□ -1.21
COL8A1-203ENST00000452013 FDX2Q6P4F2 183 aa7.48□□□□□ -1.21
COL8A1-203ENST00000452013 TMPRSS11AQ6ZMR5 421 aa7.48□□□□□ -1.21
COL8A1-203ENST00000452013 Q6ZSR3 168 aa7.48□□□□□ -1.21
COL8A1-203ENST00000452013 MOB3CQ70IA8 216 aa7.48□□□□□ -1.21
COL8A1-203ENST00000452013 ZDHHC23Q8IYP9 409 aa7.48□□□□□ -1.21
COL8A1-203ENST00000452013 OR5A2Q8NGI9 324 aa7.48□□□□□ -1.21
COL8A1-203ENST00000452013 OR14K1Q8NGZ2 314 aa7.48□□□□□ -1.21
COL8A1-203ENST00000452013 SETD6Q8TBK2 473 aa7.48□□□□□ -1.21
COL8A1-203ENST00000452013 CHAC2Q8WUX2 184 aa7.48□□□□□ -1.21
COL8A1-203ENST00000452013 OR5P3Q8WZ94 311 aa7.48□□□□□ -1.21
COL8A1-203ENST00000452013 MSI2Q96DH6 328 aaKnown RBP7.48□□□□□ -1.21
COL8A1-203ENST00000452013 TMEM80Q96HE8 168 aa7.48□□□□□ -1.21
COL8A1-203ENST00000452013 C4orf36Q96KX1 117 aa7.48□□□□□ -1.21
COL8A1-203ENST00000452013 SOX7Q9BT81 388 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms