RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, human

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SGCE-208	ENST00000450385	TCEANC	Q8N8B7	351 aa		13.27	□□□□□ -0.29
SGCE-208	ENST00000450385	SCCPDH	Q8NBX0	429 aa		13.27	□□□□□ -0.29
SGCE-208	ENST00000450385	TRUB1	Q8WWH5	349 aa	Known RBP	13.27	□□□□□ -0.29
SGCE-208	ENST00000450385	RFK	Q969G6	155 aa		13.27	□□□□□ -0.29
SGCE-208	ENST00000450385	ZNF48	Q96MX3	618 aa	Predicted RBP	13.27	□□□□□ -0.29
SGCE-208	ENST00000450385	ENPP5	Q9UJA9	477 aa		13.27	□□□□□ -0.29
SGCE-208	ENST00000450385	KLHDC2	Q9Y2U9	406 aa		13.27	□□□□□ -0.29
SGCE-208	ENST00000450385	SNX5	Q9Y5X3	404 aa		13.27	□□□□□ -0.29
SGCE-208	ENST00000450385	NKX6-3	A6NJ46	265 aa		13.26	□□□□□ -0.29
SGCE-208	ENST00000450385	ZNF670-ZNF695	F2Z2N8	137 aa		13.26	□□□□□ -0.29
SGCE-208	ENST00000450385	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	13.26	□□□□□ -0.29
SGCE-208	ENST00000450385	DLGAP1	O14490	977 aa		13.26	□□□□□ -0.29
SGCE-208	ENST00000450385	OR2T7	P0C7T2	308 aa		13.26	□□□□□ -0.29
SGCE-208	ENST00000450385	HCCS	P53701	268 aa		13.26	□□□□□ -0.29
SGCE-208	ENST00000450385	CAV3	P56539	151 aa		13.26	□□□□□ -0.29
SGCE-208	ENST00000450385	CSNK2B	P67870	215 aa		13.26	□□□□□ -0.29
SGCE-208	ENST00000450385	WDR38	Q5JTN6	314 aa		13.26	□□□□□ -0.29
SGCE-208	ENST00000450385	ZNF322	Q6U7Q0	402 aa	Predicted RBP	13.26	□□□□□ -0.29
SGCE-208	ENST00000450385		Q6YL49	198 aa		13.26	□□□□□ -0.29
SGCE-208	ENST00000450385	ZNF788	Q6ZQV5	615 aa		13.26	□□□□□ -0.29
SGCE-208	ENST00000450385	KCTD8	Q6ZWB6	473 aa		13.26	□□□□□ -0.29
SGCE-208	ENST00000450385	OR8J1	Q8NGP2	316 aa		13.26	□□□□□ -0.29
SGCE-208	ENST00000450385	OR2T27	Q8NH04	317 aa		13.26	□□□□□ -0.29
SGCE-208	ENST00000450385	ZDHHC16	Q969W1	377 aa		13.26	□□□□□ -0.29
SGCE-208	ENST00000450385	RBM4B	Q9BQ04	359 aa	Known RBP	13.26	□□□□□ -0.29
SGCE-208	ENST00000450385	PCGF1	Q9BSM1	259 aa		13.26	□□□□□ -0.29
SGCE-208	ENST00000450385	ZNF747	Q9BV97	191 aa		13.26	□□□□□ -0.29
SGCE-208	ENST00000450385	SIRPD	Q9H106	197 aa		13.26	□□□□□ -0.29
SGCE-208	ENST00000450385	OR51I2	Q9H344	312 aa		13.26	□□□□□ -0.29
SGCE-208	ENST00000450385	ADGRL4	Q9HBW9	690 aa		13.26	□□□□□ -0.29
SGCE-208	ENST00000450385	SMURF1	Q9HCE7	757 aa		13.26	□□□□□ -0.29
SGCE-208	ENST00000450385	IKZF2	Q9UKS7	526 aa		13.26	□□□□□ -0.29
SGCE-208	ENST00000450385	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	13.26	□□□□□ -0.29
SGCE-208	ENST00000450385	CAB39	Q9Y376	341 aa	Predicted RBP	13.26	□□□□□ -0.29
SGCE-208	ENST00000450385		R4GMQ9	66 aa		13.26	□□□□□ -0.29
SGCE-208	ENST00000450385	CENPVL3	A0A0U1RRI6	287 aa		13.25	□□□□□ -0.29
SGCE-208	ENST00000450385	LOC110117498-PIK3R3	F6TDL0	507 aa		13.25	□□□□□ -0.29
SGCE-208	ENST00000450385	SULT1C4	O75897	302 aa		13.25	□□□□□ -0.29
SGCE-208	ENST00000450385	ACAA1	P09110	424 aa	Predicted RBP	13.25	□□□□□ -0.29
SGCE-208	ENST00000450385	EGR1	P18146	543 aa		13.25	□□□□□ -0.29
SGCE-208	ENST00000450385	HTR1F	P30939	366 aa		13.25	□□□□□ -0.29
SGCE-208	ENST00000450385	CXCR4	P61073	352 aa		13.25	□□□□□ -0.29
SGCE-208	ENST00000450385	GUCA2A	Q02747	115 aa		13.25	□□□□□ -0.29
SGCE-208	ENST00000450385	ZFP1	Q6P2D0	407 aa		13.25	□□□□□ -0.29
SGCE-208	ENST00000450385	SHISA2	Q6UWI4	295 aa		13.25	□□□□□ -0.29
SGCE-208	ENST00000450385	ZNF573	Q86YE8	665 aa		13.25	□□□□□ -0.29
SGCE-208	ENST00000450385	EGFL6	Q8IUX8	553 aa		13.25	□□□□□ -0.29
SGCE-208	ENST00000450385	SLC35F2	Q8IXU6	374 aa		13.25	□□□□□ -0.29
SGCE-208	ENST00000450385	ELMOD2	Q8IZ81	293 aa		13.25	□□□□□ -0.29
SGCE-208	ENST00000450385	ANGPTL6	Q8NI99	470 aa		13.25	□□□□□ -0.29
SGCE-208	ENST00000450385	TBC1D15	Q8TC07	691 aa		13.25	□□□□□ -0.29
SGCE-208	ENST00000450385	OR51E1	Q8TCB6	317 aa		13.25	□□□□□ -0.29
SGCE-208	ENST00000450385	HPSE2	Q8WWQ2	592 aa		13.25	□□□□□ -0.29
SGCE-208	ENST00000450385	ST8SIA4	Q92187	359 aa		13.25	□□□□□ -0.29
SGCE-208	ENST00000450385	C1orf147	Q96MC9	270 aa	Predicted RBP	13.25	□□□□□ -0.29
SGCE-208	ENST00000450385	MYCBP	Q99417	103 aa	Predicted RBP	13.25	□□□□□ -0.29
SGCE-208	ENST00000450385	CCL13	Q99616	98 aa		13.25	□□□□□ -0.29
SGCE-208	ENST00000450385	GABARAPL3	Q9BY60	117 aa		13.25	□□□□□ -0.29
SGCE-208	ENST00000450385	GPR84	Q9NQS5	396 aa		13.25	□□□□□ -0.29
SGCE-208	ENST00000450385	ACOXL	Q9NUZ1	547 aa		13.25	□□□□□ -0.29
SGCE-208	ENST00000450385	MMP24	Q9Y5R2	645 aa		13.25	□□□□□ -0.29
SGCE-208	ENST00000450385	IGHV1-69D	A0A0B4J2H0	117 aa		13.24	□□□□□ -0.29
SGCE-208	ENST00000450385	ZNF732	B4DXR9	585 aa		13.24	□□□□□ -0.29
SGCE-208	ENST00000450385	SIGLEC5	O15389	551 aa		13.24	□□□□□ -0.29
SGCE-208	ENST00000450385	NOS1AP	O75052	506 aa	Predicted RBP	13.24	□□□□□ -0.29
SGCE-208	ENST00000450385	SRSF10	O75494	262 aa	Known RBP	13.24	□□□□□ -0.29
SGCE-208	ENST00000450385	NRAS	P01111	189 aa		13.24	□□□□□ -0.29
SGCE-208	ENST00000450385	IGHV1-69	P01742	117 aa		13.24	□□□□□ -0.29
SGCE-208	ENST00000450385	GPM6A	P51674	278 aa		13.24	□□□□□ -0.29
SGCE-208	ENST00000450385	CLVS2	Q5SYC1	327 aa		13.24	□□□□□ -0.29
SGCE-208	ENST00000450385	ZNF684	Q5T5D7	378 aa		13.24	□□□□□ -0.29
SGCE-208	ENST00000450385	TMEM42	Q69YG0	159 aa		13.24	□□□□□ -0.29
SGCE-208	ENST00000450385	COMMD2	Q86X83	199 aa		13.24	□□□□□ -0.29
SGCE-208	ENST00000450385	SSMEM1	Q8WWF3	244 aa		13.24	□□□□□ -0.29
SGCE-208	ENST00000450385	LRTOMT	Q8WZ04	291 aa		13.24	□□□□□ -0.29
SGCE-208	ENST00000450385	RPL3L	Q92901	407 aa	Known RBP	13.24	□□□□□ -0.29
SGCE-208	ENST00000450385	TMIGD2	Q96BF3	282 aa		13.24	□□□□□ -0.29
SGCE-208	ENST00000450385	C10orf35	Q96D05	121 aa		13.24	□□□□□ -0.29
SGCE-208	ENST00000450385	TBX15	Q96SF7	602 aa		13.24	□□□□□ -0.29
SGCE-208	ENST00000450385	CIB1	Q99828	191 aa		13.24	□□□□□ -0.29
SGCE-208	ENST00000450385	DCTN5	Q9BTE1	182 aa		13.24	□□□□□ -0.29
SGCE-208	ENST00000450385	SLITRK2	Q9H156	845 aa		13.24	□□□□□ -0.29
SGCE-208	ENST00000450385	RASSF4	Q9H2L5	321 aa		13.24	□□□□□ -0.29
SGCE-208	ENST00000450385	UNKL	Q9H9P5	680 aa	Known RBP	13.24	□□□□□ -0.29
SGCE-208	ENST00000450385	NLK	Q9UBE8	527 aa		13.24	□□□□□ -0.29
SGCE-208	ENST00000450385	COPS3	Q9UNS2	423 aa		13.24	□□□□□ -0.29
SGCE-208	ENST00000450385	PIGL	Q9Y2B2	252 aa		13.24	□□□□□ -0.29
SGCE-208	ENST00000450385	POLDIP2	Q9Y2S7	368 aa		13.24	□□□□□ -0.29
SGCE-208	ENST00000450385	IGHV3OR15-7	A0A075B7D8	119 aa		13.23	□□□□□ -0.29
SGCE-208	ENST00000450385	OR2AT4	A6NND4	320 aa		13.23	□□□□□ -0.29
SGCE-208	ENST00000450385		M0R1W7	72 aa		13.23	□□□□□ -0.29
SGCE-208	ENST00000450385	TTR	P02766	147 aa		13.23	□□□□□ -0.29
SGCE-208	ENST00000450385	KRT8	P05787	483 aa		13.23	□□□□□ -0.29
SGCE-208	ENST00000450385	MRPL3	P09001	348 aa	Known RBP	13.23	□□□□□ -0.29
SGCE-208	ENST00000450385	GLRA1	P23415	457 aa		13.23	□□□□□ -0.29
SGCE-208	ENST00000450385	CDC42	P60953	191 aa		13.23	□□□□□ -0.29
SGCE-208	ENST00000450385	ARF6	P62330	175 aa		13.23	□□□□□ -0.29
SGCE-208	ENST00000450385	DEFB112	Q30KQ8	113 aa		13.23	□□□□□ -0.29
SGCE-208	ENST00000450385	SLC25A30	Q5SVS4	291 aa		13.23	□□□□□ -0.29
SGCE-208	ENST00000450385	BCL2L15	Q5TBC7	163 aa		13.23	□□□□□ -0.29

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