RNA–Protein interactions for RNA: ENST00000449771.6

RAPGEF3-205, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 6,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-205ENST00000449771 TNFAIP6P98066 277 aaPredicted RBP12.54□□□□□ -0.4
RAPGEF3-205ENST00000449771 JMJD6Q6NYC1 403 aaPredicted RBP12.54□□□□□ -0.4
RAPGEF3-205ENST00000449771 PRR7Q8TB68 274 aa12.54□□□□□ -0.4
RAPGEF3-205ENST00000449771 PPIL1Q9Y3C6 166 aa12.54□□□□□ -0.4
RAPGEF3-205ENST00000449771 TJP1Q07157 1748 aa12.54□□□□□ -0.4
RAPGEF3-205ENST00000449771 MYO9BQ13459 2157 aa12.54□□□□□ -0.4
RAPGEF3-205ENST00000449771 CLDN20P56880 219 aa12.53□□□□□ -0.4
RAPGEF3-205ENST00000449771 GPR32P1Q8NGA4 272 aa12.53□□□□□ -0.4
RAPGEF3-205ENST00000449771 DUS3LQ96G46 650 aaKnown RBP12.53□□□□□ -0.4
RAPGEF3-205ENST00000449771 MRGPRX3Q96LB0 322 aa12.53□□□□□ -0.4
RAPGEF3-205ENST00000449771 CLEC18AA5D8T8 446 aa12.53□□□□□ -0.4
RAPGEF3-205ENST00000449771 DEFB108AA8MXU0 73 aa12.53□□□□□ -0.4
RAPGEF3-205ENST00000449771 OR4E1P0C645 316 aa12.53□□□□□ -0.4
RAPGEF3-205ENST00000449771 PSMB6P28072 239 aa12.53□□□□□ -0.4
RAPGEF3-205ENST00000449771 CLEC18CQ8NCF0 446 aa12.53□□□□□ -0.4
RAPGEF3-205ENST00000449771 OR4S1Q8NGB4 309 aa12.53□□□□□ -0.4
RAPGEF3-205ENST00000449771 OTOSQ8NHW6 89 aa12.53□□□□□ -0.4
RAPGEF3-205ENST00000449771 ZFP64Q9NPA5 681 aa12.53□□□□□ -0.4
RAPGEF3-205ENST00000449771 TAAR3PQ9P1P4 343 aa12.53□□□□□ -0.4
RAPGEF3-205ENST00000449771 FLVCR2Q9UPI3 526 aa12.53□□□□□ -0.4
RAPGEF3-205ENST00000449771 MYO18AQ92614 2054 aaKnown RBP12.53□□□□□ -0.4
RAPGEF3-205ENST00000449771 DCTN6O00399 190 aa12.53□□□□□ -0.4
RAPGEF3-205ENST00000449771 ABI3BPQ7Z7G0 1075 aa12.53□□□□□ -0.4
RAPGEF3-205ENST00000449771 TMEM179BQ7Z7N9 219 aa12.53□□□□□ -0.4
RAPGEF3-205ENST00000449771 RELL2Q8NC24 303 aaPredicted RBP12.53□□□□□ -0.4
RAPGEF3-205ENST00000449771 LHX4Q969G2 390 aa12.53□□□□□ -0.4
RAPGEF3-205ENST00000449771 MISP3Q96FF7 219 aa12.53□□□□□ -0.4
RAPGEF3-205ENST00000449771 TRAF4Q9BUZ4 470 aaPredicted RBP12.53□□□□□ -0.4
RAPGEF3-205ENST00000449771 RAB1BQ9H0U4 201 aa12.53□□□□□ -0.4
RAPGEF3-205ENST00000449771 SOX8P57073 446 aa12.53□□□□□ -0.4
RAPGEF3-205ENST00000449771 PNLIPRP3Q17RR3 467 aa12.53□□□□□ -0.4
RAPGEF3-205ENST00000449771 LILRA6Q6PI73 481 aa12.53□□□□□ -0.4
RAPGEF3-205ENST00000449771 BTNL3Q6UXE8 466 aa12.53□□□□□ -0.4
RAPGEF3-205ENST00000449771 RIMKLAQ8IXN7 391 aa12.53□□□□□ -0.4
RAPGEF3-205ENST00000449771 RTN4IP1Q8WWV3 396 aaPredicted RBP12.53□□□□□ -0.4
RAPGEF3-205ENST00000449771 PP6455Q8WZ26 134 aa12.53□□□□□ -0.4
RAPGEF3-205ENST00000449771 RPUSD4Q96CM3 377 aaKnown RBP12.53□□□□□ -0.4
RAPGEF3-205ENST00000449771 DBX1A6NMT0 343 aa12.53□□□□□ -0.4
RAPGEF3-205ENST00000449771 UMAD1C9J7I0 102 aa12.53□□□□□ -0.4
RAPGEF3-205ENST00000449771 CTSVO60911 334 aa12.53□□□□□ -0.4
RAPGEF3-205ENST00000449771 PDCD1Q15116 288 aa12.53□□□□□ -0.4
RAPGEF3-205ENST00000449771 TM4SF19Q96DZ7 209 aa12.53□□□□□ -0.4
RAPGEF3-205ENST00000449771 FAM103A1Q9BTL3 118 aaKnown RBP12.53□□□□□ -0.4
RAPGEF3-205ENST00000449771 LAMB1P07942 1786 aa12.52□□□□□ -0.4
RAPGEF3-205ENST00000449771 GATCO43716 136 aaKnown RBP12.52□□□□□ -0.4
RAPGEF3-205ENST00000449771 PCBP4P57723 403 aaKnown RBP12.52□□□□□ -0.4
RAPGEF3-205ENST00000449771 ACOT7LQ6ZUV0 252 aa12.52□□□□□ -0.4
RAPGEF3-205ENST00000449771 PPP5D1E7EU14 171 aa12.52□□□□□ -0.41
RAPGEF3-205ENST00000449771 TOX4O94842 621 aa12.52□□□□□ -0.41
RAPGEF3-205ENST00000449771 COX7A1P24310 79 aa12.52□□□□□ -0.41
RAPGEF3-205ENST00000449771 CEACAM6P40199 344 aa12.52□□□□□ -0.41
RAPGEF3-205ENST00000449771 SPINK14Q6IE38 97 aa12.52□□□□□ -0.41
RAPGEF3-205ENST00000449771 PWWP2BQ6NUJ5 590 aa12.52□□□□□ -0.41
RAPGEF3-205ENST00000449771 C2orf50Q96LR7 162 aa12.52□□□□□ -0.41
RAPGEF3-205ENST00000449771 AUNIPQ9H7T9 357 aa12.52□□□□□ -0.41
RAPGEF3-205ENST00000449771 PLEKHA2Q9HB19 425 aa12.52□□□□□ -0.41
RAPGEF3-205ENST00000449771 OCIAD1Q9NX40 245 aa12.52□□□□□ -0.41
RAPGEF3-205ENST00000449771 NUMA1Q14980 2115 aa12.52□□□□□ -0.41
RAPGEF3-205ENST00000449771 H3BMH7 237 aa12.52□□□□□ -0.41
RAPGEF3-205ENST00000449771 KLF3P57682 345 aaPredicted RBP12.52□□□□□ -0.41
RAPGEF3-205ENST00000449771 FMODQ06828 376 aa12.52□□□□□ -0.41
RAPGEF3-205ENST00000449771 OR52N4Q8NGI2 321 aa12.52□□□□□ -0.41
RAPGEF3-205ENST00000449771 OR13G1Q8NGZ3 307 aa12.52□□□□□ -0.41
RAPGEF3-205ENST00000449771 ZNF707Q96C28 371 aaPredicted RBP12.52□□□□□ -0.41
RAPGEF3-205ENST00000449771 LHX9Q9NQ69 397 aa12.52□□□□□ -0.41
RAPGEF3-205ENST00000449771 GLI3P10071 1580 aa12.52□□□□□ -0.41
RAPGEF3-205ENST00000449771 A0A0B4J2E0 115 aa12.52□□□□□ -0.41
RAPGEF3-205ENST00000449771 A0A1B0GX12 115 aa12.52□□□□□ -0.41
RAPGEF3-205ENST00000449771 LRRC3CA6NJW4 275 aa12.52□□□□□ -0.41
RAPGEF3-205ENST00000449771 H7BYZ3 331 aa12.52□□□□□ -0.41
RAPGEF3-205ENST00000449771 NGFP01138 241 aa12.52□□□□□ -0.41
RAPGEF3-205ENST00000449771 PMP22Q01453 160 aa12.52□□□□□ -0.41
RAPGEF3-205ENST00000449771 FAM209BQ5JX69 171 aa12.52□□□□□ -0.41
RAPGEF3-205ENST00000449771 ZNF774Q6NX45 483 aa12.52□□□□□ -0.41
RAPGEF3-205ENST00000449771 ZNF793Q6ZN11 406 aa12.52□□□□□ -0.41
RAPGEF3-205ENST00000449771 LYG2Q86SG7 212 aa12.52□□□□□ -0.41
RAPGEF3-205ENST00000449771 DOK1Q99704 481 aa12.52□□□□□ -0.41
RAPGEF3-205ENST00000449771 SERPINE3A8MV23 424 aa12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 CDX4O14627 284 aaPredicted RBP12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 OR2J3O76001 311 aa12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 HOXC4P09017 264 aaPredicted RBP12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 RANP62826 216 aaKnown RBP12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 RAE1P78406 368 aaKnown RBP12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 CD300CQ08708 224 aa12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 PRICKLE4Q2TBC4 344 aa12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 PRSS41Q7RTY9 318 aa12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 UBALD1Q8TB05 177 aa12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 FGF20Q9NP95 211 aaPredicted RBP12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 ZNF727A8MUV8 499 aa12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 SLC25A4P12235 298 aa12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 FUT3P21217 361 aa12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 FAHD1Q6P587 224 aa12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 UBTD1Q9HAC8 227 aa12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 MMP25Q9NPA2 562 aa12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 A0A1B0GTL3 188 aa12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 UBE2L5PA0A1B0GUS4 154 aa12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 GPR31O00270 319 aa12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 NKX2-2O95096 273 aa12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 FCER1GP30273 86 aa12.51□□□□□ -0.41
RAPGEF3-205ENST00000449771 ASCL1P50553 236 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms