RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 GPN1Q9HCN4 374 aaPredicted RBP8.56□□□□□ -1.04
CCDC171-203ENST00000449575 MBD2Q9UBB5 411 aa8.56□□□□□ -1.04
CCDC171-203ENST00000449575 CYB5R1Q9UHQ9 305 aa8.56□□□□□ -1.04
CCDC171-203ENST00000449575 ANXA2P2A6NMY6 339 aa8.55□□□□□ -1.04
CCDC171-203ENST00000449575 ECDO95905 644 aaPredicted RBP8.55□□□□□ -1.04
CCDC171-203ENST00000449575 S100A9P06702 114 aaKnown RBP8.55□□□□□ -1.04
CCDC171-203ENST00000449575 EPXP11678 715 aa8.55□□□□□ -1.04
CCDC171-203ENST00000449575 PRF1P14222 555 aa8.55□□□□□ -1.04
CCDC171-203ENST00000449575 CELP19835 753 aa8.55□□□□□ -1.04
CCDC171-203ENST00000449575 LAP3P28838 519 aa8.55□□□□□ -1.04
CCDC171-203ENST00000449575 CAPZA2P47755 286 aa8.55□□□□□ -1.04
CCDC171-203ENST00000449575 PPA1Q15181 289 aa8.55□□□□□ -1.04
CCDC171-203ENST00000449575 ALKAL2Q6UX46 152 aa8.55□□□□□ -1.04
CCDC171-203ENST00000449575 ZNF627Q7L945 461 aa8.55□□□□□ -1.04
CCDC171-203ENST00000449575 CPOQ8IVL8 374 aa8.55□□□□□ -1.04
CCDC171-203ENST00000449575 C1orf162Q8NEQ5 155 aaPredicted RBP8.55□□□□□ -1.04
CCDC171-203ENST00000449575 BEST4Q8NFU0 473 aa8.55□□□□□ -1.04
CCDC171-203ENST00000449575 RFKQ969G6 155 aa8.55□□□□□ -1.04
CCDC171-203ENST00000449575 FBXO17Q96EF6 278 aa8.55□□□□□ -1.04
CCDC171-203ENST00000449575 MS4A3Q96HJ5 214 aa8.55□□□□□ -1.04
CCDC171-203ENST00000449575 NMNAT2Q9BZQ4 307 aa8.55□□□□□ -1.04
CCDC171-203ENST00000449575 MGAT4CQ9UBM8 478 aa8.55□□□□□ -1.04
CCDC171-203ENST00000449575 GPR160Q9UJ42 338 aa8.55□□□□□ -1.04
CCDC171-203ENST00000449575 TVP23AA6NH52 213 aa8.55□□□□□ -1.04
CCDC171-203ENST00000449575 FAM74A7A6NL05 159 aa8.55□□□□□ -1.04
CCDC171-203ENST00000449575 DEFB108AA8MXU0 73 aa8.55□□□□□ -1.04
CCDC171-203ENST00000449575 RENP00797 406 aa8.55□□□□□ -1.04
CCDC171-203ENST00000449575 LIMS3P0CW19 117 aa8.55□□□□□ -1.04
CCDC171-203ENST00000449575 LIMS4P0CW20 117 aa8.55□□□□□ -1.04
CCDC171-203ENST00000449575 SMIM6P0DI80 62 aa8.55□□□□□ -1.04
CCDC171-203ENST00000449575 ZNF83P51522 516 aa8.55□□□□□ -1.04
CCDC171-203ENST00000449575 SSTP61278 116 aa8.55□□□□□ -1.04
CCDC171-203ENST00000449575 SEC61A1P61619 476 aaKnown RBP8.55□□□□□ -1.04
CCDC171-203ENST00000449575 EFNB1P98172 346 aa8.55□□□□□ -1.04
CCDC171-203ENST00000449575 SPOCK1Q08629 439 aa8.55□□□□□ -1.04
CCDC171-203ENST00000449575 ENDOGQ14249 297 aaKnown RBP8.55□□□□□ -1.04
CCDC171-203ENST00000449575 FAM74A3Q4VXF1 159 aa8.55□□□□□ -1.04
CCDC171-203ENST00000449575 GSG1LQ6UXU4 331 aa8.55□□□□□ -1.04
CCDC171-203ENST00000449575 TMUB2Q71RG4 321 aa8.55□□□□□ -1.04
CCDC171-203ENST00000449575 ZNF511Q8NB15 262 aa8.55□□□□□ -1.04
CCDC171-203ENST00000449575 ZNF485Q8NCK3 441 aa8.55□□□□□ -1.04
CCDC171-203ENST00000449575 ZNF75AQ96N20 296 aa8.55□□□□□ -1.04
CCDC171-203ENST00000449575 ZCCHC4Q9H5U6 513 aa8.55□□□□□ -1.04
CCDC171-203ENST00000449575 MRPL22Q9NWU5 206 aaKnown RBP8.55□□□□□ -1.04
CCDC171-203ENST00000449575 VPS13CQ709C8 3753 aa8.55□□□□□ -1.04
CCDC171-203ENST00000449575 DPRXA6NFQ7 191 aa8.54□□□□□ -1.04
CCDC171-203ENST00000449575 RIIAD1A6NNX1 92 aa8.54□□□□□ -1.04
CCDC171-203ENST00000449575 GSTZ1O43708 216 aaPredicted RBP8.54□□□□□ -1.04
CCDC171-203ENST00000449575 PLAUP00749 431 aa8.54□□□□□ -1.04
CCDC171-203ENST00000449575 S100A8P05109 93 aa8.54□□□□□ -1.04
CCDC171-203ENST00000449575 FABP1P07148 127 aa8.54□□□□□ -1.04
CCDC171-203ENST00000449575 OR8G3PP0DMU2 310 aa8.54□□□□□ -1.04
CCDC171-203ENST00000449575 CD79AP11912 226 aa8.54□□□□□ -1.04
CCDC171-203ENST00000449575 COX6B1P14854 86 aa8.54□□□□□ -1.04
CCDC171-203ENST00000449575 SPI1P17947 270 aa8.54□□□□□ -1.04
CCDC171-203ENST00000449575 RAB3BP20337 219 aa8.54□□□□□ -1.04
CCDC171-203ENST00000449575 LOXP28300 417 aaPredicted RBP8.54□□□□□ -1.04
CCDC171-203ENST00000449575 GDI2P50395 445 aaKnown RBP8.54□□□□□ -1.04
CCDC171-203ENST00000449575 ZNF84P51523 738 aa8.54□□□□□ -1.04
CCDC171-203ENST00000449575 CCR6P51684 374 aa8.54□□□□□ -1.04
CCDC171-203ENST00000449575 MRPS34P82930 218 aaKnown RBP8.54□□□□□ -1.04
CCDC171-203ENST00000449575 TRAM1Q15629 374 aa8.54□□□□□ -1.04
CCDC171-203ENST00000449575 MICBQ29980 383 aa8.54□□□□□ -1.04
CCDC171-203ENST00000449575 HFEQ30201 348 aa8.54□□□□□ -1.04
CCDC171-203ENST00000449575 LINC01590Q5TEZ4 76 aa8.54□□□□□ -1.04
CCDC171-203ENST00000449575 FOXL2NBQ6ZUU3 175 aa8.54□□□□□ -1.04
CCDC171-203ENST00000449575 MDP1Q86V88 176 aa8.54□□□□□ -1.04
CCDC171-203ENST00000449575 PXT1Q8NFP0 134 aa8.54□□□□□ -1.04
CCDC171-203ENST00000449575 SMAP2Q8WU79 429 aaPredicted RBP8.54□□□□□ -1.04
CCDC171-203ENST00000449575 C11orf40Q8WZ69 217 aa8.54□□□□□ -1.04
CCDC171-203ENST00000449575 BOD1Q96IK1 185 aa8.54□□□□□ -1.04
CCDC171-203ENST00000449575 ABHD1Q96SE0 405 aa8.54□□□□□ -1.04
CCDC171-203ENST00000449575 CHIAQ9BZP6 476 aa8.54□□□□□ -1.04
CCDC171-203ENST00000449575 OR51V1Q9H2C8 321 aa8.54□□□□□ -1.04
CCDC171-203ENST00000449575 ESRP2Q9H6T0 727 aaKnown RBP8.54□□□□□ -1.04
CCDC171-203ENST00000449575 DSCAMO60469 2012 aa8.54□□□□□ -1.04
CCDC171-203ENST00000449575 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.54□□□□□ -1.04
CCDC171-203ENST00000449575 SHISA3A0PJX4 238 aa8.54□□□□□ -1.04
CCDC171-203ENST00000449575 TEX46H3BTG2 121 aa8.54□□□□□ -1.04
CCDC171-203ENST00000449575 CTDSPLO15194 276 aa8.54□□□□□ -1.04
CCDC171-203ENST00000449575 KHDRBS3O75525 346 aaKnown RBP8.54□□□□□ -1.04
CCDC171-203ENST00000449575 OR2A4O95047 310 aa8.54□□□□□ -1.04
CCDC171-203ENST00000449575 HPXP02790 462 aa8.54□□□□□ -1.04
CCDC171-203ENST00000449575 ZNF3P17036 446 aa8.54□□□□□ -1.04
CCDC171-203ENST00000449575 AP3S2P59780 193 aa8.54□□□□□ -1.04
CCDC171-203ENST00000449575 PSMA6P60900 246 aaKnown RBP8.54□□□□□ -1.04
CCDC171-203ENST00000449575 GMFBP60983 142 aa8.54□□□□□ -1.04
CCDC171-203ENST00000449575 HAGHLQ6PII5 290 aaPredicted RBP8.54□□□□□ -1.04
CCDC171-203ENST00000449575 UQCC3Q6UW78 93 aa8.54□□□□□ -1.04
CCDC171-203ENST00000449575 ZNF584Q8IVC4 421 aa8.54□□□□□ -1.04
CCDC171-203ENST00000449575 ZFP41Q8N8Y5 198 aa8.54□□□□□ -1.04
CCDC171-203ENST00000449575 SLC26A10Q8NG04 563 aa8.54□□□□□ -1.04
CCDC171-203ENST00000449575 OR2A7Q96R45 310 aa8.54□□□□□ -1.04
CCDC171-203ENST00000449575 ZNF251Q9BRH9 671 aa8.54□□□□□ -1.04
CCDC171-203ENST00000449575 TEX12Q9BXU0 123 aa8.54□□□□□ -1.04
CCDC171-203ENST00000449575 WDR76Q9H967 626 aa8.54□□□□□ -1.04
CCDC171-203ENST00000449575 PDZD2O15018 2839 aa8.54□□□□□ -1.04
CCDC171-203ENST00000449575 RAI1Q7Z5J4 1906 aaPredicted RBP8.54□□□□□ -1.04
CCDC171-203ENST00000449575 LINC00587B1AMM8 73 aa8.53□□□□□ -1.04
CCDC171-203ENST00000449575 MMP7P09237 267 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms