RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 HES5Q5TA89 166 aa16.65■□□□□ 0.26
SGCE-207ENST00000447873 SP5Q6BEB4 398 aaPredicted RBP16.65■□□□□ 0.26
SGCE-207ENST00000447873 Q6ZR03 302 aa16.65■□□□□ 0.26
SGCE-207ENST00000447873 LHFPL2Q6ZUX7 228 aa16.65■□□□□ 0.26
SGCE-207ENST00000447873 CDH26Q8IXH8 852 aa16.65■□□□□ 0.26
SGCE-207ENST00000447873 FBXW5Q969U6 566 aa16.65■□□□□ 0.26
SGCE-207ENST00000447873 RNF170Q96K19 258 aa16.65■□□□□ 0.26
SGCE-207ENST00000447873 MICU1Q9BPX6 476 aa16.65■□□□□ 0.26
SGCE-207ENST00000447873 METTL17Q9H7H0 456 aaPredicted RBP16.65■□□□□ 0.26
SGCE-207ENST00000447873 NOP16Q9Y3C1 178 aaKnown RBP16.65■□□□□ 0.26
SGCE-207ENST00000447873 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.64■□□□□ 0.25
SGCE-207ENST00000447873 ZNF732B4DXR9 585 aa16.64■□□□□ 0.25
SGCE-207ENST00000447873 H0YL77 283 aa16.64■□□□□ 0.25
SGCE-207ENST00000447873 AIPO00170 330 aa16.64■□□□□ 0.25
SGCE-207ENST00000447873 MLNRO43193 412 aa16.64■□□□□ 0.25
SGCE-207ENST00000447873 COX6B1P14854 86 aa16.64■□□□□ 0.25
SGCE-207ENST00000447873 GPM6AP51674 278 aa16.64■□□□□ 0.25
SGCE-207ENST00000447873 PNLDC1Q8NA58 520 aaKnown RBP16.64■□□□□ 0.25
SGCE-207ENST00000447873 OR2Z1Q8NG97 314 aa16.64■□□□□ 0.25
SGCE-207ENST00000447873 OR10AD1Q8NGE0 317 aa16.64■□□□□ 0.25
SGCE-207ENST00000447873 SORCS2Q96PQ0 1159 aa16.64■□□□□ 0.25
SGCE-207ENST00000447873 NKX3-1Q99801 234 aaPredicted RBP16.64■□□□□ 0.25
SGCE-207ENST00000447873 UQCC2Q9BRT2 126 aa16.64■□□□□ 0.25
SGCE-207ENST00000447873 RTL8AQ9BWD3 113 aa16.64■□□□□ 0.25
SGCE-207ENST00000447873 SLIRPQ9GZT3 109 aaKnown RBP16.64■□□□□ 0.25
SGCE-207ENST00000447873 NKIRAS2Q9NYR9 191 aa16.64■□□□□ 0.25
SGCE-207ENST00000447873 ZSCAN5BA6NJL1 495 aa16.64■□□□□ 0.25
SGCE-207ENST00000447873 OR5B21A6NL26 309 aa16.64■□□□□ 0.25
SGCE-207ENST00000447873 B9A039 149 aa16.64■□□□□ 0.25
SGCE-207ENST00000447873 SLC2A2P11168 524 aaPredicted RBP16.64■□□□□ 0.25
SGCE-207ENST00000447873 THBS2P35442 1172 aa16.64■□□□□ 0.25
SGCE-207ENST00000447873 ALDH3B1P43353 468 aa16.64■□□□□ 0.25
SGCE-207ENST00000447873 ZNF81P51508 661 aa16.64■□□□□ 0.25
SGCE-207ENST00000447873 EFNB3Q15768 340 aa16.64■□□□□ 0.25
SGCE-207ENST00000447873 LYPD6Q86Y78 171 aa16.64■□□□□ 0.25
SGCE-207ENST00000447873 FBXL14Q8N1E6 418 aa16.64■□□□□ 0.25
SGCE-207ENST00000447873 MUC15Q8N387 334 aa16.64■□□□□ 0.25
SGCE-207ENST00000447873 SPERTQ8NA61 448 aa16.64■□□□□ 0.25
SGCE-207ENST00000447873 OR6M1Q8NGM8 313 aa16.64■□□□□ 0.25
SGCE-207ENST00000447873 AP3S1Q92572 193 aa16.64■□□□□ 0.25
SGCE-207ENST00000447873 GTF3AQ92664 365 aaKnown RBP16.64■□□□□ 0.25
SGCE-207ENST00000447873 RFT1Q96AA3 541 aa16.64■□□□□ 0.25
SGCE-207ENST00000447873 PTTG2Q9NZH5 202 aa16.64■□□□□ 0.25
SGCE-207ENST00000447873 PLEKHB1Q9UF11 243 aaPredicted RBP16.64■□□□□ 0.25
SGCE-207ENST00000447873 USP9YO00507 2555 aaPredicted RBP16.63■□□□□ 0.25
SGCE-207ENST00000447873 A0A1B0GWJ7 208 aa16.63■□□□□ 0.25
SGCE-207ENST00000447873 PQLC2LA1A4F0 135 aa16.63■□□□□ 0.25
SGCE-207ENST00000447873 SLC17A2O00624 439 aa16.63■□□□□ 0.25
SGCE-207ENST00000447873 CD37P11049 281 aa16.63■□□□□ 0.25
SGCE-207ENST00000447873 HTR2CP28335 458 aa16.63■□□□□ 0.25
SGCE-207ENST00000447873 GNG3P63215 75 aa16.63■□□□□ 0.25
SGCE-207ENST00000447873 RAB11BQ15907 218 aa16.63■□□□□ 0.25
SGCE-207ENST00000447873 RNF144BQ7Z419 303 aa16.63■□□□□ 0.25
SGCE-207ENST00000447873 FGF23Q9GZV9 251 aaPredicted RBP16.63■□□□□ 0.25
SGCE-207ENST00000447873 CNTD2Q9H8S5 307 aa16.63■□□□□ 0.25
SGCE-207ENST00000447873 FAIMQ9NVQ4 179 aa16.63■□□□□ 0.25
SGCE-207ENST00000447873 STEAP1Q9UHE8 339 aa16.63■□□□□ 0.25
SGCE-207ENST00000447873 IGKV1-27A0A075B6S5 117 aa16.62■□□□□ 0.25
SGCE-207ENST00000447873 F5H5P2 479 aa16.62■□□□□ 0.25
SGCE-207ENST00000447873 M0R233 179 aa16.62■□□□□ 0.25
SGCE-207ENST00000447873 HS3ST1O14792 307 aa16.62■□□□□ 0.25
SGCE-207ENST00000447873 SPRY3O43610 288 aa16.62■□□□□ 0.25
SGCE-207ENST00000447873 NAT2P11245 290 aa16.62■□□□□ 0.25
SGCE-207ENST00000447873 MZT1Q08AG7 82 aa16.62■□□□□ 0.25
SGCE-207ENST00000447873 ZNF404Q494X3 552 aa16.62■□□□□ 0.25
SGCE-207ENST00000447873 C1orf100Q5SVJ3 147 aa16.62■□□□□ 0.25
SGCE-207ENST00000447873 OR5D18Q8NGL1 313 aa16.62■□□□□ 0.25
SGCE-207ENST00000447873 MCFD2Q8NI22 146 aa16.62■□□□□ 0.25
SGCE-207ENST00000447873 ELMOD3Q96FG2 381 aa16.62■□□□□ 0.25
SGCE-207ENST00000447873 CXXC4Q9H2H0 198 aa16.62■□□□□ 0.25
SGCE-207ENST00000447873 C14orf119Q9NWQ9 140 aa16.62■□□□□ 0.25
SGCE-207ENST00000447873 ZDHHC8Q9ULC8 765 aa16.62■□□□□ 0.25
SGCE-207ENST00000447873 LRBAP50851 2863 aa16.62■□□□□ 0.25
SGCE-207ENST00000447873 GCN1Q92616 2671 aaKnown RBP16.61■□□□□ 0.25
SGCE-207ENST00000447873 A0A1W2PPR1 153 aa16.61■□□□□ 0.25
SGCE-207ENST00000447873 TMEM127O75204 238 aa16.61■□□□□ 0.25
SGCE-207ENST00000447873 CFPP27918 469 aa16.61■□□□□ 0.25
SGCE-207ENST00000447873 CLDN12P56749 244 aa16.61■□□□□ 0.25
SGCE-207ENST00000447873 RIN1Q13671 783 aa16.61■□□□□ 0.25
SGCE-207ENST00000447873 MST1LQ2TV78 715 aa16.61■□□□□ 0.25
SGCE-207ENST00000447873 FAM166AQ6J272 317 aa16.61■□□□□ 0.25
SGCE-207ENST00000447873 ANGPTL5Q86XS5 388 aa16.61■□□□□ 0.25
SGCE-207ENST00000447873 OR4D6Q8NGJ1 314 aa16.61■□□□□ 0.25
SGCE-207ENST00000447873 ZNF671Q8TAW3 534 aa16.61■□□□□ 0.25
SGCE-207ENST00000447873 KCTD12Q96CX2 325 aaKnown RBP16.61■□□□□ 0.25
SGCE-207ENST00000447873 LIN7BQ9HAP6 207 aa16.61■□□□□ 0.25
SGCE-207ENST00000447873 DYNLRB1Q9NP97 96 aa16.61■□□□□ 0.25
SGCE-207ENST00000447873 PMF1-BGLAPU3KQ54 211 aa16.61■□□□□ 0.25
SGCE-207ENST00000447873 FAM221AA4D161 298 aa16.6■□□□□ 0.25
SGCE-207ENST00000447873 PLATP00750 562 aa16.6■□□□□ 0.25
SGCE-207ENST00000447873 HAAOP46952 286 aa16.6■□□□□ 0.25
SGCE-207ENST00000447873 OR3A4PP47883 348 aa16.6■□□□□ 0.25
SGCE-207ENST00000447873 POU3F4P49335 361 aa16.6■□□□□ 0.25
SGCE-207ENST00000447873 SNRPD2P62316 118 aaKnown RBP16.6■□□□□ 0.25
SGCE-207ENST00000447873 P2RY14Q15391 338 aa16.6■□□□□ 0.25
SGCE-207ENST00000447873 AWAT2Q6E213 333 aa16.6■□□□□ 0.25
SGCE-207ENST00000447873 CRIP3Q6Q6R5 217 aa16.6■□□□□ 0.25
SGCE-207ENST00000447873 ZNF573Q86YE8 665 aa16.6■□□□□ 0.25
SGCE-207ENST00000447873 TNFAIP8L1Q8WVP5 186 aa16.6■□□□□ 0.25
SGCE-207ENST00000447873 C6orf62Q9GZU0 229 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms