RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 A0A1W2PRG6 482 aa4.63□□□□□ -1.67
BRAFP1-201ENST00000445336 HMGB1P1B2RPK0 211 aaPredicted RBP4.63□□□□□ -1.67
BRAFP1-201ENST00000445336 KRT14P02533 472 aa4.63□□□□□ -1.67
BRAFP1-201ENST00000445336 TMEM11P17152 192 aa4.63□□□□□ -1.67
BRAFP1-201ENST00000445336 IMPDH1P20839 514 aa4.63□□□□□ -1.67
BRAFP1-201ENST00000445336 GSTT1P30711 240 aa4.63□□□□□ -1.67
BRAFP1-201ENST00000445336 CADM2Q8N3J6 435 aa4.63□□□□□ -1.67
BRAFP1-201ENST00000445336 BBS10Q8TAM1 723 aa4.63□□□□□ -1.67
BRAFP1-201ENST00000445336 SLC7A6Q92536 515 aa4.63□□□□□ -1.67
BRAFP1-201ENST00000445336 RSRP1Q9BUV0 290 aa4.63□□□□□ -1.67
BRAFP1-201ENST00000445336 ADA2Q9NZK5 511 aa4.63□□□□□ -1.67
BRAFP1-201ENST00000445336 ZNF391Q9UJN7 358 aa4.63□□□□□ -1.67
BRAFP1-201ENST00000445336 IGKV1D-42A0A075B6H8 117 aa4.62□□□□□ -1.67
BRAFP1-201ENST00000445336 IGHV4OR15-8A0A075B7B6 117 aa4.62□□□□□ -1.67
BRAFP1-201ENST00000445336 A0A087WW49 117 aa4.62□□□□□ -1.67
BRAFP1-201ENST00000445336 TRMUO75648 421 aaKnown RBP4.62□□□□□ -1.67
BRAFP1-201ENST00000445336 CSN3P07498 182 aa4.62□□□□□ -1.67
BRAFP1-201ENST00000445336 IL7RP16871 459 aa4.62□□□□□ -1.67
BRAFP1-201ENST00000445336 DYNC1I2Q13409 638 aaKnown RBP4.62□□□□□ -1.67
BRAFP1-201ENST00000445336 SGCAQ16586 387 aa4.62□□□□□ -1.67
BRAFP1-201ENST00000445336 ULK3Q6PHR2 472 aa4.62□□□□□ -1.67
BRAFP1-201ENST00000445336 C17orf53Q8N3J3 647 aaPredicted RBP4.62□□□□□ -1.67
BRAFP1-201ENST00000445336 OR1M1Q8NGA1 313 aa4.62□□□□□ -1.67
BRAFP1-201ENST00000445336 RHOVQ96L33 236 aa4.62□□□□□ -1.67
BRAFP1-201ENST00000445336 KRT84Q9NSB2 600 aa4.62□□□□□ -1.67
BRAFP1-201ENST00000445336 TRAV25A0A0B4J276 109 aa4.62□□□□□ -1.67
BRAFP1-201ENST00000445336 CD300LBA8K4G0 201 aa4.62□□□□□ -1.67
BRAFP1-201ENST00000445336 SMR3BP02814 79 aaPredicted RBP4.62□□□□□ -1.67
BRAFP1-201ENST00000445336 PAX6P26367 422 aa4.62□□□□□ -1.67
BRAFP1-201ENST00000445336 CCT5P48643 541 aa4.62□□□□□ -1.67
BRAFP1-201ENST00000445336 HIST1H3AP68431 136 aa4.62□□□□□ -1.67
BRAFP1-201ENST00000445336 SNX1Q13596 522 aa4.62□□□□□ -1.67
BRAFP1-201ENST00000445336 TRIM25Q14258 630 aaKnown RBP4.62□□□□□ -1.67
BRAFP1-201ENST00000445336 IMPG1Q17R60 797 aa4.62□□□□□ -1.67
BRAFP1-201ENST00000445336 HIST2H3PS2Q5TEC6 136 aa4.62□□□□□ -1.67
BRAFP1-201ENST00000445336 HIST2H3AQ71DI3 136 aa4.62□□□□□ -1.67
BRAFP1-201ENST00000445336 C10orf107Q8IVU9 208 aa4.62□□□□□ -1.67
BRAFP1-201ENST00000445336 NKAIN4Q8IVV8 208 aa4.62□□□□□ -1.67
BRAFP1-201ENST00000445336 PDIK1LQ8N165 341 aa4.62□□□□□ -1.67
BRAFP1-201ENST00000445336 MINDY2Q8NBR6 621 aa4.62□□□□□ -1.67
BRAFP1-201ENST00000445336 OTUB1Q96FW1 271 aaPredicted RBP4.62□□□□□ -1.67
BRAFP1-201ENST00000445336 CFAP36Q96G28 342 aa4.62□□□□□ -1.67
BRAFP1-201ENST00000445336 RBP7Q96R05 134 aa4.62□□□□□ -1.67
BRAFP1-201ENST00000445336 PRSS27Q9BQR3 290 aa4.62□□□□□ -1.67
BRAFP1-201ENST00000445336 A0A087X0M5 115 aa4.61□□□□□ -1.67
BRAFP1-201ENST00000445336 A0A1B0GX30 115 aa4.61□□□□□ -1.67
BRAFP1-201ENST00000445336 ZNF785A8K8V0 405 aa4.61□□□□□ -1.67
BRAFP1-201ENST00000445336 H3BUA1 57 aa4.61□□□□□ -1.67
BRAFP1-201ENST00000445336 MTRF1O75570 445 aaKnown RBP4.61□□□□□ -1.67
BRAFP1-201ENST00000445336 TPM3P06753 285 aa4.61□□□□□ -1.67
BRAFP1-201ENST00000445336 FGF4P08620 206 aa4.61□□□□□ -1.67
BRAFP1-201ENST00000445336 PRRX1P54821 245 aa4.61□□□□□ -1.67
BRAFP1-201ENST00000445336 ACTA2P62736 377 aa4.61□□□□□ -1.67
BRAFP1-201ENST00000445336 ACTG2P63267 376 aa4.61□□□□□ -1.67
BRAFP1-201ENST00000445336 ACTC1P68032 377 aa4.61□□□□□ -1.67
BRAFP1-201ENST00000445336 ACTA1P68133 377 aa4.61□□□□□ -1.67
BRAFP1-201ENST00000445336 SPA17Q15506 151 aa4.61□□□□□ -1.67
BRAFP1-201ENST00000445336 TMEM41BQ5BJD5 291 aa4.61□□□□□ -1.67
BRAFP1-201ENST00000445336 KCTD8Q6ZWB6 473 aa4.61□□□□□ -1.67
BRAFP1-201ENST00000445336 PGAP1Q75T13 922 aa4.61□□□□□ -1.67
BRAFP1-201ENST00000445336 C10orf111Q8N326 155 aa4.61□□□□□ -1.67
BRAFP1-201ENST00000445336 Q8N6K4 173 aa4.61□□□□□ -1.67
BRAFP1-201ENST00000445336 CDC26Q8NHZ8 85 aa4.61□□□□□ -1.67
BRAFP1-201ENST00000445336 BCAS4Q8TDM0 211 aa4.61□□□□□ -1.67
BRAFP1-201ENST00000445336 OR51I1Q9H343 314 aa4.61□□□□□ -1.67
BRAFP1-201ENST00000445336 POLE4Q9NR33 117 aa4.61□□□□□ -1.67
BRAFP1-201ENST00000445336 ZNF232Q9UNY5 417 aa4.61□□□□□ -1.67
BRAFP1-201ENST00000445336 OR2AT4A6NND4 320 aa4.61□□□□□ -1.67
BRAFP1-201ENST00000445336 SLC1A7O00341 560 aa4.61□□□□□ -1.67
BRAFP1-201ENST00000445336 HLA-DPB1P04440 258 aa4.61□□□□□ -1.67
BRAFP1-201ENST00000445336 ADORA3P0DMS8 318 aa4.61□□□□□ -1.67
BRAFP1-201ENST00000445336 CTRB1P17538 263 aa4.61□□□□□ -1.67
BRAFP1-201ENST00000445336 FUT3P21217 361 aa4.61□□□□□ -1.67
BRAFP1-201ENST00000445336 KRTAP10-1P60331 282 aa4.61□□□□□ -1.67
BRAFP1-201ENST00000445336 KIAA0040Q15053 153 aa4.61□□□□□ -1.67
BRAFP1-201ENST00000445336 CTRB2Q6GPI1 263 aa4.61□□□□□ -1.67
BRAFP1-201ENST00000445336 ASCL4Q6XD76 172 aa4.61□□□□□ -1.67
BRAFP1-201ENST00000445336 MRPL21Q7Z2W9 205 aaKnown RBP4.61□□□□□ -1.67
BRAFP1-201ENST00000445336 TSPYL5Q86VY4 417 aaPredicted RBP4.61□□□□□ -1.67
BRAFP1-201ENST00000445336 TMEM185AQ8NFB2 350 aa4.61□□□□□ -1.67
BRAFP1-201ENST00000445336 NTN5Q8WTR8 489 aaPredicted RBP4.61□□□□□ -1.67
BRAFP1-201ENST00000445336 TMEM19Q96HH6 336 aa4.61□□□□□ -1.67
BRAFP1-201ENST00000445336 HRASLS5Q96KN8 279 aa4.61□□□□□ -1.67
BRAFP1-201ENST00000445336 TEX37Q96LM6 180 aa4.61□□□□□ -1.67
BRAFP1-201ENST00000445336 ZNF714Q96N38 554 aa4.61□□□□□ -1.67
BRAFP1-201ENST00000445336 NICN1Q9BSH3 213 aa4.61□□□□□ -1.67
BRAFP1-201ENST00000445336 C1orf21Q9H246 121 aa4.61□□□□□ -1.67
BRAFP1-201ENST00000445336 RLIMQ9NVW2 624 aa4.61□□□□□ -1.67
BRAFP1-201ENST00000445336 THUMPD1Q9NXG2 353 aaKnown RBP4.61□□□□□ -1.67
BRAFP1-201ENST00000445336 ERGIC3Q9Y282 383 aa4.61□□□□□ -1.67
BRAFP1-201ENST00000445336 LAP3P28838 519 aa4.6□□□□□ -1.67
BRAFP1-201ENST00000445336 TPM4P67936 248 aa4.6□□□□□ -1.67
BRAFP1-201ENST00000445336 CLCQ05315 142 aa4.6□□□□□ -1.67
BRAFP1-201ENST00000445336 KCNMB1Q16558 191 aa4.6□□□□□ -1.67
BRAFP1-201ENST00000445336 SPDYAQ5MJ70 313 aa4.6□□□□□ -1.67
BRAFP1-201ENST00000445336 TRMT10BQ6PF06 316 aaKnown RBP4.6□□□□□ -1.67
BRAFP1-201ENST00000445336 SLC16A12Q6ZSM3 486 aa4.6□□□□□ -1.67
BRAFP1-201ENST00000445336 LINC00528Q8N1L1 170 aa4.6□□□□□ -1.67
BRAFP1-201ENST00000445336 OR5D16Q8NGK9 328 aa4.6□□□□□ -1.67
BRAFP1-201ENST00000445336 OR2T27Q8NH04 317 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms