RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 H3BN98 237 aa11.3□□□□□ -0.6
PTPRE-203ENST00000442830 ATP8B1O43520 1251 aa11.3□□□□□ -0.6
PTPRE-203ENST00000442830 PRR23D2P0DMB1 279 aaPredicted RBP11.3□□□□□ -0.6
PTPRE-203ENST00000442830 CLUP10909 449 aa11.3□□□□□ -0.6
PTPRE-203ENST00000442830 NDUFB7P17568 137 aa11.3□□□□□ -0.6
PTPRE-203ENST00000442830 ANOS1P23352 680 aa11.3□□□□□ -0.6
PTPRE-203ENST00000442830 GLRA1P23415 457 aa11.3□□□□□ -0.6
PTPRE-203ENST00000442830 MSX2P35548 267 aaPredicted RBP11.3□□□□□ -0.6
PTPRE-203ENST00000442830 EGR3Q06889 387 aa11.3□□□□□ -0.6
PTPRE-203ENST00000442830 SLC35D3Q5M8T2 416 aa11.3□□□□□ -0.6
PTPRE-203ENST00000442830 ZBTB37Q5TC79 503 aa11.3□□□□□ -0.6
PTPRE-203ENST00000442830 LCN1P1Q5VSP4 162 aa11.3□□□□□ -0.6
PTPRE-203ENST00000442830 LCN8Q6JVE9 175 aa11.3□□□□□ -0.6
PTPRE-203ENST00000442830 DEGS2Q6QHC5 323 aa11.3□□□□□ -0.6
PTPRE-203ENST00000442830 CYP2R1Q6VVX0 501 aa11.3□□□□□ -0.6
PTPRE-203ENST00000442830 KRT74Q7RTS7 529 aa11.3□□□□□ -0.6
PTPRE-203ENST00000442830 REC114Q7Z4M0 266 aa11.3□□□□□ -0.6
PTPRE-203ENST00000442830 DHFR2Q86XF0 187 aa11.3□□□□□ -0.6
PTPRE-203ENST00000442830 OR10G2Q8NGC3 310 aa11.3□□□□□ -0.6
PTPRE-203ENST00000442830 OR51G2Q8NGK0 314 aa11.3□□□□□ -0.6
PTPRE-203ENST00000442830 TNFRSF14Q92956 283 aa11.3□□□□□ -0.6
PTPRE-203ENST00000442830 OTULINQ96BN8 352 aa11.3□□□□□ -0.6
PTPRE-203ENST00000442830 HEXA-AS1Q9H8Q6 139 aa11.3□□□□□ -0.6
PTPRE-203ENST00000442830 BRD7Q9NPI1 651 aa11.3□□□□□ -0.6
PTPRE-203ENST00000442830 MAB21L2Q9Y586 359 aa11.3□□□□□ -0.6
PTPRE-203ENST00000442830 PLXNB1O43157 2135 aa11.29□□□□□ -0.6
PTPRE-203ENST00000442830 A0A0U1RQV5 110 aa11.29□□□□□ -0.6
PTPRE-203ENST00000442830 A0A1B0GW55 424 aa11.29□□□□□ -0.6
PTPRE-203ENST00000442830 H0YAE9 185 aa11.29□□□□□ -0.6
PTPRE-203ENST00000442830 TSPAN15O95858 294 aa11.29□□□□□ -0.6
PTPRE-203ENST00000442830 HMGN1P05114 100 aa11.29□□□□□ -0.6
PTPRE-203ENST00000442830 DUX4L2P0CJ85 424 aa11.29□□□□□ -0.6
PTPRE-203ENST00000442830 DUX4L3P0CJ86 424 aa11.29□□□□□ -0.6
PTPRE-203ENST00000442830 DUX4L4P0CJ87 422 aa11.29□□□□□ -0.6
PTPRE-203ENST00000442830 DUX4L5P0CJ88 424 aa11.29□□□□□ -0.6
PTPRE-203ENST00000442830 DUX4L6P0CJ89 424 aa11.29□□□□□ -0.6
PTPRE-203ENST00000442830 DUX4L7P0CJ90 424 aa11.29□□□□□ -0.6
PTPRE-203ENST00000442830 KIR2DS4P43632 304 aa11.29□□□□□ -0.6
PTPRE-203ENST00000442830 LRRC75BQ2VPJ9 315 aa11.29□□□□□ -0.6
PTPRE-203ENST00000442830 SMIM21Q3B7S5 101 aa11.29□□□□□ -0.6
PTPRE-203ENST00000442830 KCTD18Q6PI47 426 aaPredicted RBP11.29□□□□□ -0.6
PTPRE-203ENST00000442830 DUX4L9Q6RFH8 374 aaPredicted RBP11.29□□□□□ -0.6
PTPRE-203ENST00000442830 OR5K1Q8NHB7 308 aa11.29□□□□□ -0.6
PTPRE-203ENST00000442830 OR2T6Q8NHC8 308 aa11.29□□□□□ -0.6
PTPRE-203ENST00000442830 GIPC3Q8TF64 312 aa11.29□□□□□ -0.6
PTPRE-203ENST00000442830 THEM6Q8WUY1 208 aa11.29□□□□□ -0.6
PTPRE-203ENST00000442830 PIGCQ92535 297 aa11.29□□□□□ -0.6
PTPRE-203ENST00000442830 RPL3LQ92901 407 aaKnown RBP11.29□□□□□ -0.6
PTPRE-203ENST00000442830 MEGF9Q9H1U4 602 aa11.29□□□□□ -0.6
PTPRE-203ENST00000442830 PPA2Q9H2U2 334 aa11.29□□□□□ -0.6
PTPRE-203ENST00000442830 DUX4Q9UBX2 424 aa11.29□□□□□ -0.6
PTPRE-203ENST00000442830 H3BUX3 64 aa11.28□□□□□ -0.6
PTPRE-203ENST00000442830 AKR7A2O43488 359 aa11.28□□□□□ -0.6
PTPRE-203ENST00000442830 OPN1MWP04001 364 aa11.28□□□□□ -0.6
PTPRE-203ENST00000442830 OPN1MW2P0DN77 364 aa11.28□□□□□ -0.6
PTPRE-203ENST00000442830 OPN1MW3P0DN78 364 aa11.28□□□□□ -0.6
PTPRE-203ENST00000442830 RAP2AP10114 183 aa11.28□□□□□ -0.6
PTPRE-203ENST00000442830 AMY2BP19961 511 aa11.28□□□□□ -0.6
PTPRE-203ENST00000442830 ATP6V1B2P21281 511 aa11.28□□□□□ -0.6
PTPRE-203ENST00000442830 DCTDP32321 178 aa11.28□□□□□ -0.6
PTPRE-203ENST00000442830 GABRA2P47869 451 aa11.28□□□□□ -0.6
PTPRE-203ENST00000442830 KLRD1Q13241 179 aa11.28□□□□□ -0.6
PTPRE-203ENST00000442830 TRIM25Q14258 630 aaKnown RBP11.28□□□□□ -0.6
PTPRE-203ENST00000442830 DGUOKQ16854 277 aa11.28□□□□□ -0.6
PTPRE-203ENST00000442830 CEACAM21Q3KPI0 293 aa11.28□□□□□ -0.6
PTPRE-203ENST00000442830 SLC35E4Q6ICL7 350 aa11.28□□□□□ -0.6
PTPRE-203ENST00000442830 FGFRL1Q8N441 504 aa11.28□□□□□ -0.6
PTPRE-203ENST00000442830 OR5T2Q8NGG2 359 aa11.28□□□□□ -0.6
PTPRE-203ENST00000442830 OR5A2Q8NGI9 324 aa11.28□□□□□ -0.6
PTPRE-203ENST00000442830 FAM110DQ8TAY7 271 aaPredicted RBP11.28□□□□□ -0.6
PTPRE-203ENST00000442830 PPP1R14AQ96A00 147 aa11.28□□□□□ -0.6
PTPRE-203ENST00000442830 DUS3LQ96G46 650 aaKnown RBP11.28□□□□□ -0.6
PTPRE-203ENST00000442830 SDSLQ96GA7 329 aa11.28□□□□□ -0.6
PTPRE-203ENST00000442830 CLPTM1LQ96KA5 538 aa11.28□□□□□ -0.6
PTPRE-203ENST00000442830 LRGUKQ96M69 825 aa11.28□□□□□ -0.6
PTPRE-203ENST00000442830 SSX3Q99909 188 aa11.28□□□□□ -0.6
PTPRE-203ENST00000442830 CDCA4Q9BXL8 241 aa11.28□□□□□ -0.6
PTPRE-203ENST00000442830 NPFFR1Q9GZQ6 430 aa11.28□□□□□ -0.6
PTPRE-203ENST00000442830 WDR13Q9H1Z4 485 aa11.28□□□□□ -0.6
PTPRE-203ENST00000442830 OR51V1Q9H2C8 321 aa11.28□□□□□ -0.6
PTPRE-203ENST00000442830 SEMA6AQ9H2E6 1030 aa11.28□□□□□ -0.6
PTPRE-203ENST00000442830 ZNF556Q9HAH1 456 aa11.28□□□□□ -0.6
PTPRE-203ENST00000442830 SNTG1Q9NSN8 517 aa11.28□□□□□ -0.6
PTPRE-203ENST00000442830 ARL8BQ9NVJ2 186 aa11.28□□□□□ -0.6
PTPRE-203ENST00000442830 LAMP5Q9UJQ1 280 aa11.28□□□□□ -0.6
PTPRE-203ENST00000442830 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.28□□□□□ -0.6
PTPRE-203ENST00000442830 U3KQV3 271 aa11.28□□□□□ -0.6
PTPRE-203ENST00000442830 TCRBV5S2A0A599 114 aa11.27□□□□□ -0.61
PTPRE-203ENST00000442830 FAM183AA6NL82 134 aa11.27□□□□□ -0.61
PTPRE-203ENST00000442830 SLC1A7O00341 560 aa11.27□□□□□ -0.61
PTPRE-203ENST00000442830 GSC2O15499 205 aa11.27□□□□□ -0.61
PTPRE-203ENST00000442830 ANGPTL7O43827 346 aa11.27□□□□□ -0.61
PTPRE-203ENST00000442830 MTRF1O75570 445 aaKnown RBP11.27□□□□□ -0.61
PTPRE-203ENST00000442830 ACKR3P25106 362 aa11.27□□□□□ -0.61
PTPRE-203ENST00000442830 GPM6AP51674 278 aa11.27□□□□□ -0.61
PTPRE-203ENST00000442830 EFNB2P52799 333 aa11.27□□□□□ -0.61
PTPRE-203ENST00000442830 LGALS4P56470 323 aa11.27□□□□□ -0.61
PTPRE-203ENST00000442830 GMFBP60983 142 aa11.27□□□□□ -0.61
PTPRE-203ENST00000442830 RIPPLY1Q0D2K3 151 aa11.27□□□□□ -0.61
PTPRE-203ENST00000442830 THAP5Q7Z6K1 395 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms