RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 ISG20L2Q9H9L3 353 aaKnown RBP12.61□□□□□ -0.39
CSNK1E-210ENST00000442216 PLEKHA1Q9HB21 404 aa12.61□□□□□ -0.39
CSNK1E-210ENST00000442216 UBAP1Q9NZ09 502 aa12.61□□□□□ -0.39
CSNK1E-210ENST00000442216 MIOXQ9UGB7 285 aa12.61□□□□□ -0.39
CSNK1E-210ENST00000442216 FN1P02751 2386 aaKnown RBP12.61□□□□□ -0.39
CSNK1E-210ENST00000442216 TRAV38-1A0A0B4J264 116 aa12.6□□□□□ -0.39
CSNK1E-210ENST00000442216 TRAV20A0A0B4J274 112 aa12.6□□□□□ -0.39
CSNK1E-210ENST00000442216 LOC107986453A0A1B0GWG9 222 aa12.6□□□□□ -0.39
CSNK1E-210ENST00000442216 hCG_1807616A0A1W2PRN6 198 aa12.6□□□□□ -0.39
CSNK1E-210ENST00000442216 OR4C45A6NMZ5 311 aa12.6□□□□□ -0.39
CSNK1E-210ENST00000442216 CEACAM18A8MTB9 384 aa12.6□□□□□ -0.39
CSNK1E-210ENST00000442216 LGALS8O00214 317 aa12.6□□□□□ -0.39
CSNK1E-210ENST00000442216 NDUFA2O43678 99 aa12.6□□□□□ -0.39
CSNK1E-210ENST00000442216 CCDC159P0C7I6 412 aa12.6□□□□□ -0.39
CSNK1E-210ENST00000442216 HNRNPA0Q13151 305 aaKnown RBP12.6□□□□□ -0.39
CSNK1E-210ENST00000442216 ODF4Q2M2E3 257 aa12.6□□□□□ -0.39
CSNK1E-210ENST00000442216 CCDC58Q4VC31 144 aa12.6□□□□□ -0.39
CSNK1E-210ENST00000442216 PLCXD3Q63HM9 321 aa12.6□□□□□ -0.39
CSNK1E-210ENST00000442216 DCDC5Q6ZRR9 648 aa12.6□□□□□ -0.39
CSNK1E-210ENST00000442216 ZNF826PQ6ZT77 177 aa12.6□□□□□ -0.39
CSNK1E-210ENST00000442216 MOB3CQ70IA8 216 aa12.6□□□□□ -0.39
CSNK1E-210ENST00000442216 SCCPDHQ8NBX0 429 aa12.6□□□□□ -0.39
CSNK1E-210ENST00000442216 TMEM186Q96B77 213 aa12.6□□□□□ -0.39
CSNK1E-210ENST00000442216 TMEM246Q9BRR3 403 aa12.6□□□□□ -0.39
CSNK1E-210ENST00000442216 CHCHD3Q9NX63 227 aaKnown RBP12.6□□□□□ -0.39
CSNK1E-210ENST00000442216 LPAR3Q9UBY5 353 aa12.6□□□□□ -0.39
CSNK1E-210ENST00000442216 PSORS1C1Q9UIG5 152 aa12.6□□□□□ -0.39
CSNK1E-210ENST00000442216 HHLA2Q9UM44 414 aa12.6□□□□□ -0.39
CSNK1E-210ENST00000442216 LRCH1Q9Y2L9 728 aa12.6□□□□□ -0.39
CSNK1E-210ENST00000442216 POLR3KQ9Y2Y1 108 aaPredicted RBP12.6□□□□□ -0.39
CSNK1E-210ENST00000442216 WNK2Q9Y3S1 2297 aa12.59□□□□□ -0.39
CSNK1E-210ENST00000442216 ARHGAP32A7KAX9 2087 aa12.59□□□□□ -0.39
CSNK1E-210ENST00000442216 PPIAL4CA0A0B4J2A2 164 aa12.59□□□□□ -0.39
CSNK1E-210ENST00000442216 ANKRD61A6NGH8 418 aa12.59□□□□□ -0.39
CSNK1E-210ENST00000442216 OOEPA6NGQ2 149 aa12.59□□□□□ -0.39
CSNK1E-210ENST00000442216 TMEM212A6NML5 194 aa12.59□□□□□ -0.39
CSNK1E-210ENST00000442216 A8MXK9 166 aa12.59□□□□□ -0.39
CSNK1E-210ENST00000442216 SRRM5B3KS81 715 aa12.59□□□□□ -0.39
CSNK1E-210ENST00000442216 ZNF732B4DXR9 585 aa12.59□□□□□ -0.39
CSNK1E-210ENST00000442216 CDIPTO14735 213 aa12.59□□□□□ -0.39
CSNK1E-210ENST00000442216 PLPP2O43688 288 aa12.59□□□□□ -0.39
CSNK1E-210ENST00000442216 CRLF1O75462 422 aa12.59□□□□□ -0.39
CSNK1E-210ENST00000442216 FOXH1O75593 365 aa12.59□□□□□ -0.39
CSNK1E-210ENST00000442216 GATBO75879 557 aaKnown RBP12.59□□□□□ -0.39
CSNK1E-210ENST00000442216 SERPINA3P01011 423 aa12.59□□□□□ -0.39
CSNK1E-210ENST00000442216 WNT2P09544 360 aa12.59□□□□□ -0.39
CSNK1E-210ENST00000442216 MUC1P15941 1255 aaPredicted RBP12.59□□□□□ -0.39
CSNK1E-210ENST00000442216 GATA3P23771 443 aa12.59□□□□□ -0.39
CSNK1E-210ENST00000442216 RBMXP38159 391 aaKnown RBP12.59□□□□□ -0.39
CSNK1E-210ENST00000442216 ETV1P50549 477 aa12.59□□□□□ -0.39
CSNK1E-210ENST00000442216 GPM6AP51674 278 aa12.59□□□□□ -0.39
CSNK1E-210ENST00000442216 ST3GAL4Q11206 333 aa12.59□□□□□ -0.39
CSNK1E-210ENST00000442216 CEP78Q5JTW2 689 aa12.59□□□□□ -0.39
CSNK1E-210ENST00000442216 FAM201AQ5SY85 155 aa12.59□□□□□ -0.39
CSNK1E-210ENST00000442216 TEX36Q5VZQ5 186 aa12.59□□□□□ -0.39
CSNK1E-210ENST00000442216 KCTD8Q6ZWB6 473 aa12.59□□□□□ -0.39
CSNK1E-210ENST00000442216 OR52N1Q8NH53 320 aa12.59□□□□□ -0.39
CSNK1E-210ENST00000442216 LRRC29Q8WV35 223 aa12.59□□□□□ -0.39
CSNK1E-210ENST00000442216 PP6455Q8WZ26 134 aa12.59□□□□□ -0.39
CSNK1E-210ENST00000442216 ANKRD60Q9BZ19 345 aa12.59□□□□□ -0.39
CSNK1E-210ENST00000442216 CHST5Q9GZS9 411 aa12.59□□□□□ -0.39
CSNK1E-210ENST00000442216 FGF23Q9GZV9 251 aaPredicted RBP12.59□□□□□ -0.39
CSNK1E-210ENST00000442216 OR51I2Q9H344 312 aa12.59□□□□□ -0.39
CSNK1E-210ENST00000442216 FKBP14Q9NWM8 211 aa12.59□□□□□ -0.39
CSNK1E-210ENST00000442216 CDC42EP3Q9UKI2 254 aa12.59□□□□□ -0.39
CSNK1E-210ENST00000442216 XPNPEP2O43895 674 aa12.58□□□□□ -0.4
CSNK1E-210ENST00000442216 ZNF205O95201 554 aa12.58□□□□□ -0.4
CSNK1E-210ENST00000442216 RPS2P15880 293 aaKnown RBP12.58□□□□□ -0.4
CSNK1E-210ENST00000442216 MYF6P23409 242 aa12.58□□□□□ -0.4
CSNK1E-210ENST00000442216 ESCO2Q56NI9 601 aa12.58□□□□□ -0.4
CSNK1E-210ENST00000442216 C6orf141Q5SZD1 244 aa12.58□□□□□ -0.4
CSNK1E-210ENST00000442216 RPL22L1Q6P5R6 122 aaKnown RBP12.58□□□□□ -0.4
CSNK1E-210ENST00000442216 IZUMO2Q6UXV1 221 aa12.58□□□□□ -0.4
CSNK1E-210ENST00000442216 NLRC3Q7RTR2 1065 aa12.58□□□□□ -0.4
CSNK1E-210ENST00000442216 ZNF573Q86YE8 665 aa12.58□□□□□ -0.4
CSNK1E-210ENST00000442216 RDH10Q8IZV5 341 aa12.58□□□□□ -0.4
CSNK1E-210ENST00000442216 ZNF676Q8N7Q3 588 aa12.58□□□□□ -0.4
CSNK1E-210ENST00000442216 BPIFB6Q8NFQ5 453 aa12.58□□□□□ -0.4
CSNK1E-210ENST00000442216 ZNF671Q8TAW3 534 aa12.58□□□□□ -0.4
CSNK1E-210ENST00000442216 RPS4Y2Q8TD47 263 aa12.58□□□□□ -0.4
CSNK1E-210ENST00000442216 RPL3LQ92901 407 aaKnown RBP12.58□□□□□ -0.4
CSNK1E-210ENST00000442216 C12orf43Q96C57 262 aaKnown RBP12.58□□□□□ -0.4
CSNK1E-210ENST00000442216 NEIL1Q96FI4 390 aaPredicted RBP12.58□□□□□ -0.4
CSNK1E-210ENST00000442216 COMMD4Q9H0A8 199 aa12.58□□□□□ -0.4
CSNK1E-210ENST00000442216 GPR173Q9NS66 373 aa12.58□□□□□ -0.4
CSNK1E-210ENST00000442216 HIF1ANQ9NWT6 349 aa12.58□□□□□ -0.4
CSNK1E-210ENST00000442216 SLC7A11Q9UPY5 501 aa12.58□□□□□ -0.4
CSNK1E-210ENST00000442216 SONP18583 2426 aaKnown RBP12.58□□□□□ -0.4
CSNK1E-210ENST00000442216 PQLC2LA1A4F0 135 aa12.57□□□□□ -0.4
CSNK1E-210ENST00000442216 TNFRSF13BO14836 293 aaPredicted RBP12.57□□□□□ -0.4
CSNK1E-210ENST00000442216 HOXB4P17483 251 aaPredicted RBP12.57□□□□□ -0.4
CSNK1E-210ENST00000442216 HNF1AP20823 631 aa12.57□□□□□ -0.4
CSNK1E-210ENST00000442216 VHLP40337 213 aa12.57□□□□□ -0.4
CSNK1E-210ENST00000442216 NPY4RP50391 375 aa12.57□□□□□ -0.4
CSNK1E-210ENST00000442216 MICBQ29980 383 aa12.57□□□□□ -0.4
CSNK1E-210ENST00000442216 CHRFAM7AQ494W8 412 aa12.57□□□□□ -0.4
CSNK1E-210ENST00000442216 RNLSQ5VYX0 342 aa12.57□□□□□ -0.4
CSNK1E-210ENST00000442216 UTS2BQ765I0 119 aa12.57□□□□□ -0.4
CSNK1E-210ENST00000442216 STX19Q8N4C7 294 aa12.57□□□□□ -0.4
CSNK1E-210ENST00000442216 OR8B3Q8NGG8 313 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms