RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 S100PBPQ96BU1 408 aa17.91■□□□□ 0.46
SHOX2-203ENST00000441443 RARRES2Q99969 163 aa17.91■□□□□ 0.46
SHOX2-203ENST00000441443 TMEM59Q9BXS4 323 aa17.91■□□□□ 0.46
SHOX2-203ENST00000441443 PBOV1Q9GZY1 135 aa17.91■□□□□ 0.46
SHOX2-203ENST00000441443 C19orf12Q9NSK7 152 aa17.91■□□□□ 0.46
SHOX2-203ENST00000441443 UFSP2Q9NUQ7 469 aa17.91■□□□□ 0.46
SHOX2-203ENST00000441443 FAM206AQ9NX38 181 aa17.91■□□□□ 0.46
SHOX2-203ENST00000441443 C2CD4DB7Z1M9 353 aa17.9■□□□□ 0.46
SHOX2-203ENST00000441443 RAMP1O60894 148 aa17.9■□□□□ 0.46
SHOX2-203ENST00000441443 CRTAPO75718 401 aaPredicted RBP17.9■□□□□ 0.46
SHOX2-203ENST00000441443 GSTP1P09211 210 aaKnown RBP17.9■□□□□ 0.46
SHOX2-203ENST00000441443 CEBPGP53567 150 aa17.9■□□□□ 0.46
SHOX2-203ENST00000441443 FOXK1P85037 733 aa17.9■□□□□ 0.46
SHOX2-203ENST00000441443 C14orf28Q4W4Y0 310 aa17.9■□□□□ 0.46
SHOX2-203ENST00000441443 DMRTC2Q8IXT2 367 aaPredicted RBP17.9■□□□□ 0.46
SHOX2-203ENST00000441443 UBAC2Q8NBM4 344 aa17.9■□□□□ 0.46
SHOX2-203ENST00000441443 FNDC9Q8TBE3 224 aa17.9■□□□□ 0.46
SHOX2-203ENST00000441443 TWSG1Q9GZX9 223 aa17.9■□□□□ 0.46
SHOX2-203ENST00000441443 WFDC1Q9HC57 220 aa17.9■□□□□ 0.46
SHOX2-203ENST00000441443 B3GALT5Q9Y2C3 310 aa17.9■□□□□ 0.46
SHOX2-203ENST00000441443 URGCP-MRPS24S4R325 110 aa17.9■□□□□ 0.46
SHOX2-203ENST00000441443 PLPP3O14495 311 aa17.9■□□□□ 0.46
SHOX2-203ENST00000441443 SLC2A1P11166 492 aa17.9■□□□□ 0.46
SHOX2-203ENST00000441443 PPP1CCP36873 323 aaKnown RBP17.9■□□□□ 0.46
SHOX2-203ENST00000441443 RABIFP47224 123 aa17.9■□□□□ 0.46
SHOX2-203ENST00000441443 YPEL5P62699 121 aa17.9■□□□□ 0.46
SHOX2-203ENST00000441443 ZNF343Q6P1L6 599 aa17.9■□□□□ 0.46
SHOX2-203ENST00000441443 SSX9Q7RTT3 188 aa17.9■□□□□ 0.46
SHOX2-203ENST00000441443 ARHGEF39Q8N4T4 335 aa17.9■□□□□ 0.46
SHOX2-203ENST00000441443 MRPL24Q96A35 216 aaKnown RBP17.9■□□□□ 0.46
SHOX2-203ENST00000441443 PRDM13Q9H4Q3 707 aa17.9■□□□□ 0.46
SHOX2-203ENST00000441443 OPA3Q9H6K4 179 aa17.9■□□□□ 0.46
SHOX2-203ENST00000441443 LUZP4Q9P127 313 aa17.9■□□□□ 0.46
SHOX2-203ENST00000441443 H0YIG0 161 aa17.9■□□□□ 0.46
SHOX2-203ENST00000441443 DXOO77932 396 aaKnown RBP17.9■□□□□ 0.46
SHOX2-203ENST00000441443 IGLV3-21P80748 117 aaPredicted RBP17.9■□□□□ 0.46
SHOX2-203ENST00000441443 FZD2Q14332 565 aa17.9■□□□□ 0.46
SHOX2-203ENST00000441443 Q3ZCU0 254 aa17.9■□□□□ 0.46
SHOX2-203ENST00000441443 HSD17B11Q8NBQ5 300 aa17.9■□□□□ 0.46
SHOX2-203ENST00000441443 MMABQ96EY8 250 aaPredicted RBP17.9■□□□□ 0.46
SHOX2-203ENST00000441443 COL4A2P08572 1712 aa17.89■□□□□ 0.46
SHOX2-203ENST00000441443 CFAP54Q96N23 3096 aa17.89■□□□□ 0.45
SHOX2-203ENST00000441443 A8MVM7 634 aa17.89■□□□□ 0.45
SHOX2-203ENST00000441443 GFI1BQ5VTD9 330 aa17.89■□□□□ 0.45
SHOX2-203ENST00000441443 UNQ6494/PRO21346Q6UXR6 183 aa17.89■□□□□ 0.45
SHOX2-203ENST00000441443 SPNS3Q6ZMD2 512 aa17.89■□□□□ 0.45
SHOX2-203ENST00000441443 C1QL4Q86Z23 238 aa17.89■□□□□ 0.45
SHOX2-203ENST00000441443 TMEM156Q8N614 296 aa17.89■□□□□ 0.45
SHOX2-203ENST00000441443 OR5D18Q8NGL1 313 aa17.89■□□□□ 0.45
SHOX2-203ENST00000441443 GPBAR1Q8TDU6 330 aa17.89■□□□□ 0.45
SHOX2-203ENST00000441443 GTF3AQ92664 365 aaKnown RBP17.89■□□□□ 0.45
SHOX2-203ENST00000441443 C1orf123Q9NWV4 160 aa17.89■□□□□ 0.45
SHOX2-203ENST00000441443 MMP17Q9ULZ9 603 aa17.89■□□□□ 0.45
SHOX2-203ENST00000441443 ANAPC10Q9UM13 185 aa17.89■□□□□ 0.45
SHOX2-203ENST00000441443 SRPK3Q9UPE1 567 aa17.89■□□□□ 0.45
SHOX2-203ENST00000441443 TMEM184BQ9Y519 407 aaPredicted RBP17.89■□□□□ 0.45
SHOX2-203ENST00000441443 FIGNL2A6NMB9 653 aa17.89■□□□□ 0.45
SHOX2-203ENST00000441443 ST8SIA5O15466 376 aa17.89■□□□□ 0.45
SHOX2-203ENST00000441443 ZNF20P17024 532 aa17.89■□□□□ 0.45
SHOX2-203ENST00000441443 SERPINA2P20848 420 aa17.89■□□□□ 0.45
SHOX2-203ENST00000441443 GABRA4P48169 554 aa17.89■□□□□ 0.45
SHOX2-203ENST00000441443 MMP16P51512 607 aa17.89■□□□□ 0.45
SHOX2-203ENST00000441443 ZNF674Q2M3X9 581 aa17.89■□□□□ 0.45
SHOX2-203ENST00000441443 NUP54Q7Z3B4 507 aa17.89■□□□□ 0.45
SHOX2-203ENST00000441443 C1orf147Q96MC9 270 aaPredicted RBP17.89■□□□□ 0.45
SHOX2-203ENST00000441443 TMED7-TICAM2A0A0A6YYA0 188 aa17.88■□□□□ 0.45
SHOX2-203ENST00000441443 XRCC2O43543 280 aa17.88■□□□□ 0.45
SHOX2-203ENST00000441443 NSA2O95478 260 aaKnown RBP17.88■□□□□ 0.45
SHOX2-203ENST00000441443 CD63P08962 238 aa17.88■□□□□ 0.45
SHOX2-203ENST00000441443 GP1BBP13224 206 aa17.88■□□□□ 0.45
SHOX2-203ENST00000441443 SLC35A1P78382 337 aa17.88■□□□□ 0.45
SHOX2-203ENST00000441443 ACY1Q03154 408 aa17.88■□□□□ 0.45
SHOX2-203ENST00000441443 GGNBP1Q5YKI7 109 aa17.88■□□□□ 0.45
SHOX2-203ENST00000441443 SGK3Q96BR1 496 aa17.88■□□□□ 0.45
SHOX2-203ENST00000441443 YPEL4Q96NS1 127 aa17.88■□□□□ 0.45
SHOX2-203ENST00000441443 SOHLH2Q9NX45 425 aa17.88■□□□□ 0.45
SHOX2-203ENST00000441443 MED29Q9NX70 200 aa17.88■□□□□ 0.45
SHOX2-203ENST00000441443 C14orf166Q9Y224 244 aaKnown RBP17.88■□□□□ 0.45
SHOX2-203ENST00000441443 RCL1Q9Y2P8 373 aaKnown RBP17.88■□□□□ 0.45
SHOX2-203ENST00000441443 SPTY2D1-AS1A0A0U1RR47 76 aa17.88■□□□□ 0.45
SHOX2-203ENST00000441443 MT-ATP6P00846 226 aa17.88■□□□□ 0.45
SHOX2-203ENST00000441443 SLC26A5P58743 744 aa17.88■□□□□ 0.45
SHOX2-203ENST00000441443 SOHLH1Q5JUK2 328 aa17.88■□□□□ 0.45
SHOX2-203ENST00000441443 KLHL24Q6TFL4 600 aa17.88■□□□□ 0.45
SHOX2-203ENST00000441443 MFSD8Q8NHS3 518 aa17.88■□□□□ 0.45
SHOX2-203ENST00000441443 SLAMF6Q96DU3 332 aa17.88■□□□□ 0.45
SHOX2-203ENST00000441443 TGM7Q96PF1 710 aa17.88■□□□□ 0.45
SHOX2-203ENST00000441443 GPER1Q99527 375 aa17.88■□□□□ 0.45
SHOX2-203ENST00000441443 HCKP08631 526 aa17.88■□□□□ 0.45
SHOX2-203ENST00000441443 SLC37A1P57057 533 aa17.88■□□□□ 0.45
SHOX2-203ENST00000441443 GFOD1Q9NXC2 390 aa17.88■□□□□ 0.45
SHOX2-203ENST00000441443 DIRAS3O95661 229 aa17.87■□□□□ 0.45
SHOX2-203ENST00000441443 ANOS1P23352 680 aa17.87■□□□□ 0.45
SHOX2-203ENST00000441443 ASCL1P50553 236 aa17.87■□□□□ 0.45
SHOX2-203ENST00000441443 ZNF84P51523 738 aa17.87■□□□□ 0.45
SHOX2-203ENST00000441443 UCP2P55851 309 aa17.87■□□□□ 0.45
SHOX2-203ENST00000441443 HIST2H3AQ71DI3 136 aa17.87■□□□□ 0.45
SHOX2-203ENST00000441443 COMMD1Q8N668 190 aa17.87■□□□□ 0.45
SHOX2-203ENST00000441443 KCNG3Q8TAE7 436 aa17.87■□□□□ 0.45
SHOX2-203ENST00000441443 RNF133Q8WVZ7 376 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms