RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 FANCEQ9HB96 536 aa2.35□□□□□ -2.03
PFDN4-202ENST00000441080 PRSS16Q9NQE7 514 aa2.35□□□□□ -2.03
PFDN4-202ENST00000441080 TMEM100Q9NV29 134 aa2.35□□□□□ -2.03
PFDN4-202ENST00000441080 ZNF391Q9UJN7 358 aa2.35□□□□□ -2.03
PFDN4-202ENST00000441080 RAB22AQ9UL26 194 aa2.35□□□□□ -2.03
PFDN4-202ENST00000441080 WDR19Q8NEZ3 1342 aa2.35□□□□□ -2.03
PFDN4-202ENST00000441080 LOC102724200A0A096LPH7 203 aaPredicted RBP2.34□□□□□ -2.03
PFDN4-202ENST00000441080 ARPC4-TTLL3A0A0A6YYG9 625 aa2.34□□□□□ -2.03
PFDN4-202ENST00000441080 A0A1B0GTQ1 180 aa2.34□□□□□ -2.03
PFDN4-202ENST00000441080 NCF1BA6NI72 391 aaPredicted RBP2.34□□□□□ -2.03
PFDN4-202ENST00000441080 NCF1CA8MVU1 366 aaPredicted RBP2.34□□□□□ -2.03
PFDN4-202ENST00000441080 ZNF99A8MXY4 864 aaPredicted RBP2.34□□□□□ -2.03
PFDN4-202ENST00000441080 PFN1P07737 140 aaKnown RBP2.34□□□□□ -2.03
PFDN4-202ENST00000441080 RALBP11234 206 aa2.34□□□□□ -2.03
PFDN4-202ENST00000441080 PMCHP20382 165 aa2.34□□□□□ -2.03
PFDN4-202ENST00000441080 GABRR2P28476 465 aa2.34□□□□□ -2.03
PFDN4-202ENST00000441080 ARL2P36404 184 aa2.34□□□□□ -2.03
PFDN4-202ENST00000441080 CLDN8P56748 225 aa2.34□□□□□ -2.03
PFDN4-202ENST00000441080 TAS2R39P59534 338 aa2.34□□□□□ -2.03
PFDN4-202ENST00000441080 PAFAH1B2P68402 229 aa2.34□□□□□ -2.03
PFDN4-202ENST00000441080 RPL18AQ02543 176 aaKnown RBP2.34□□□□□ -2.03
PFDN4-202ENST00000441080 LINC00336Q6ZUF6 198 aa2.34□□□□□ -2.03
PFDN4-202ENST00000441080 DAW1Q8N136 415 aa2.34□□□□□ -2.03
PFDN4-202ENST00000441080 MRPL48Q96GC5 212 aaKnown RBP2.34□□□□□ -2.03
PFDN4-202ENST00000441080 SMARCD1Q96GM5 515 aa2.34□□□□□ -2.03
PFDN4-202ENST00000441080 Q96MT0 163 aa2.34□□□□□ -2.03
PFDN4-202ENST00000441080 NAPGQ99747 312 aaPredicted RBP2.34□□□□□ -2.03
PFDN4-202ENST00000441080 PDCD1LG2Q9BQ51 273 aa2.34□□□□□ -2.03
PFDN4-202ENST00000441080 TBL1XR1Q9BZK7 514 aa2.34□□□□□ -2.03
PFDN4-202ENST00000441080 ARV1Q9H2C2 271 aa2.34□□□□□ -2.03
PFDN4-202ENST00000441080 CHRAC1Q9NRG0 131 aa2.34□□□□□ -2.03
PFDN4-202ENST00000441080 NID2Q14112 1375 aa2.34□□□□□ -2.04
PFDN4-202ENST00000441080 SHROOM3Q8TF72 1996 aa2.33□□□□□ -2.04
PFDN4-202ENST00000441080 IGHV6-1A0A0B4J1U7 121 aa2.33□□□□□ -2.04
PFDN4-202ENST00000441080 TRDMT1O14717 391 aaKnown RBP2.33□□□□□ -2.04
PFDN4-202ENST00000441080 CASC3O15234 703 aaKnown RBP2.33□□□□□ -2.04
PFDN4-202ENST00000441080 IGKV1-39P01597 117 aa2.33□□□□□ -2.04
PFDN4-202ENST00000441080 IGKV1D-39P04432 117 aa2.33□□□□□ -2.04
PFDN4-202ENST00000441080 P0C880 135 aa2.33□□□□□ -2.04
PFDN4-202ENST00000441080 TGM4P49221 684 aa2.33□□□□□ -2.04
PFDN4-202ENST00000441080 PSMD4P55036 377 aaKnown RBP2.33□□□□□ -2.04
PFDN4-202ENST00000441080 ADIGQ0VDE8 80 aa2.33□□□□□ -2.04
PFDN4-202ENST00000441080 ZNF235Q14590 738 aa2.33□□□□□ -2.04
PFDN4-202ENST00000441080 MAPRE2Q15555 327 aa2.33□□□□□ -2.04
PFDN4-202ENST00000441080 HIKESHIQ53FT3 197 aa2.33□□□□□ -2.04
PFDN4-202ENST00000441080 ZNF678Q5SXM1 525 aa2.33□□□□□ -2.04
PFDN4-202ENST00000441080 TTC19Q6DKK2 380 aaPredicted RBP2.33□□□□□ -2.04
PFDN4-202ENST00000441080 MORN3Q6PF18 240 aaPredicted RBP2.33□□□□□ -2.04
PFDN4-202ENST00000441080 FAM131AQ6UXB0 335 aa2.33□□□□□ -2.04
PFDN4-202ENST00000441080 PDPNQ86YL7 162 aa2.33□□□□□ -2.04
PFDN4-202ENST00000441080 LINC00469Q8N7U9 141 aa2.33□□□□□ -2.04
PFDN4-202ENST00000441080 PEX13Q92968 403 aa2.33□□□□□ -2.04
PFDN4-202ENST00000441080 BLZF1Q9H2G9 400 aa2.33□□□□□ -2.04
PFDN4-202ENST00000441080 CA10Q9NS85 328 aa2.33□□□□□ -2.04
PFDN4-202ENST00000441080 HMGXB4Q9UGU5 601 aa2.33□□□□□ -2.04
PFDN4-202ENST00000441080 ZNF229Q9UJW7 825 aa2.33□□□□□ -2.04
PFDN4-202ENST00000441080 PPIL1Q9Y3C6 166 aa2.33□□□□□ -2.04
PFDN4-202ENST00000441080 RHBDD3Q9Y3P4 386 aa2.33□□□□□ -2.04
PFDN4-202ENST00000441080 TTC41PQ6P2S7 1318 aa2.33□□□□□ -2.04
PFDN4-202ENST00000441080 IGKV1-6A0A0C4DH72 117 aa2.32□□□□□ -2.04
PFDN4-202ENST00000441080 A0A0G2JMP0 313 aa2.32□□□□□ -2.04
PFDN4-202ENST00000441080 A0A0X1KG70 313 aa2.32□□□□□ -2.04
PFDN4-202ENST00000441080 KIR2DS1A0A191URI9 304 aa2.32□□□□□ -2.04
PFDN4-202ENST00000441080 A0A1W2PNN7 141 aa2.32□□□□□ -2.04
PFDN4-202ENST00000441080 TMEM72A0PK05 275 aa2.32□□□□□ -2.04
PFDN4-202ENST00000441080 H0YIV9 168 aa2.32□□□□□ -2.04
PFDN4-202ENST00000441080 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.32□□□□□ -2.04
PFDN4-202ENST00000441080 GCGP01275 180 aa2.32□□□□□ -2.04
PFDN4-202ENST00000441080 IGKV1D-16P01601 117 aa2.32□□□□□ -2.04
PFDN4-202ENST00000441080 KLK1P06870 262 aa2.32□□□□□ -2.04
PFDN4-202ENST00000441080 SLC35G6P0C7Q6 338 aa2.32□□□□□ -2.04
PFDN4-202ENST00000441080 SFTPCP11686 197 aa2.32□□□□□ -2.04
PFDN4-202ENST00000441080 TUBG1P23258 451 aa2.32□□□□□ -2.04
PFDN4-202ENST00000441080 GRB2P62993 217 aaKnown RBP2.32□□□□□ -2.04
PFDN4-202ENST00000441080 SLC35A1P78382 337 aa2.32□□□□□ -2.04
PFDN4-202ENST00000441080 LCN2P80188 198 aa2.32□□□□□ -2.04
PFDN4-202ENST00000441080 MEF2BQ02080 365 aaPredicted RBP2.32□□□□□ -2.04
PFDN4-202ENST00000441080 TMEM69Q5SWH9 247 aa2.32□□□□□ -2.04
PFDN4-202ENST00000441080 MRPL21Q7Z2W9 205 aaKnown RBP2.32□□□□□ -2.04
PFDN4-202ENST00000441080 SLC7A5P1Q8MH63 180 aa2.32□□□□□ -2.04
PFDN4-202ENST00000441080 ZNF664Q8N3J9 261 aa2.32□□□□□ -2.04
PFDN4-202ENST00000441080 RNF10Q8N5U6 811 aaKnown RBP2.32□□□□□ -2.04
PFDN4-202ENST00000441080 OR10Z1Q8NGY1 313 aa2.32□□□□□ -2.04
PFDN4-202ENST00000441080 ING5Q8WYH8 240 aa2.32□□□□□ -2.04
PFDN4-202ENST00000441080 HGDQ93099 445 aa2.32□□□□□ -2.04
PFDN4-202ENST00000441080 ISG20Q96AZ6 181 aaKnown RBP2.32□□□□□ -2.04
PFDN4-202ENST00000441080 STMN4Q9H169 189 aaPredicted RBP2.32□□□□□ -2.04
PFDN4-202ENST00000441080 OR51B5Q9H339 312 aa2.32□□□□□ -2.04
PFDN4-202ENST00000441080 TUBG2Q9NRH3 451 aa2.32□□□□□ -2.04
PFDN4-202ENST00000441080 VAX2Q9UIW0 290 aa2.32□□□□□ -2.04
PFDN4-202ENST00000441080 ENPP4Q9Y6X5 453 aa2.32□□□□□ -2.04
PFDN4-202ENST00000441080 JCADQ9P266 1359 aa2.32□□□□□ -2.04
PFDN4-202ENST00000441080 ZNF608Q9ULD9 1512 aaPredicted RBP2.32□□□□□ -2.04
PFDN4-202ENST00000441080 TRAV8-6A0A0B4J262 113 aa2.31□□□□□ -2.04
PFDN4-202ENST00000441080 DFFAO00273 331 aa2.31□□□□□ -2.04
PFDN4-202ENST00000441080 PTTG1O95997 202 aa2.31□□□□□ -2.04
PFDN4-202ENST00000441080 IGLV6-57P01721 117 aa2.31□□□□□ -2.04
PFDN4-202ENST00000441080 IGHV1-46P01743 117 aa2.31□□□□□ -2.04
PFDN4-202ENST00000441080 HLA-DMAP28067 261 aa2.31□□□□□ -2.04
PFDN4-202ENST00000441080 MTPNP58546 118 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms