RNA–Protein interactions for RNA: ENST00000440538.6

PUM1-207, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 1 (best) BASIC

Gene PUM1, Length 3,936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-207ENST00000440538 PRAF2O60831 178 aa5.5□□□□□ -1.53
PUM1-207ENST00000440538 NPIPB7O75200 414 aa5.5□□□□□ -1.53
PUM1-207ENST00000440538 MT-ATP6P00846 226 aa5.5□□□□□ -1.53
PUM1-207ENST00000440538 SERPINA3P01011 423 aa5.5□□□□□ -1.53
PUM1-207ENST00000440538 ACAA1P09110 424 aaPredicted RBP5.5□□□□□ -1.53
PUM1-207ENST00000440538 ADRA2CP18825 462 aa5.5□□□□□ -1.53
PUM1-207ENST00000440538 C4BPBP20851 252 aa5.5□□□□□ -1.53
PUM1-207ENST00000440538 SDHAP31040 664 aa5.5□□□□□ -1.53
PUM1-207ENST00000440538 DLX5P56178 289 aa5.5□□□□□ -1.53
PUM1-207ENST00000440538 BDH1Q02338 343 aa5.5□□□□□ -1.53
PUM1-207ENST00000440538 FAM27E3Q08E93 113 aa5.5□□□□□ -1.53
PUM1-207ENST00000440538 SWI5Q1ZZU3 235 aa5.5□□□□□ -1.53
PUM1-207ENST00000440538 PAN3Q58A45 887 aaKnown RBP5.5□□□□□ -1.53
PUM1-207ENST00000440538 HACD4Q5VWC8 232 aa5.5□□□□□ -1.53
PUM1-207ENST00000440538 DPY19L2P2Q6ZN68 376 aa5.5□□□□□ -1.53
PUM1-207ENST00000440538 S100A16Q96FQ6 103 aaKnown RBP5.5□□□□□ -1.53
PUM1-207ENST00000440538 ZNF426Q9BUY5 554 aa5.5□□□□□ -1.53
PUM1-207ENST00000440538 ALG12Q9BV10 488 aa5.5□□□□□ -1.53
PUM1-207ENST00000440538 POTEKPQ9BYX7 375 aa5.5□□□□□ -1.53
PUM1-207ENST00000440538 TLNRD1Q9H1K6 362 aa5.5□□□□□ -1.53
PUM1-207ENST00000440538 ASH2LQ9UBL3 628 aa5.5□□□□□ -1.53
PUM1-207ENST00000440538 PCDHB10Q9UN67 800 aa5.5□□□□□ -1.53
PUM1-207ENST00000440538 SLC5A6Q9Y289 635 aa5.5□□□□□ -1.53
PUM1-207ENST00000440538 FLVCR1Q9Y5Y0 555 aa5.5□□□□□ -1.53
PUM1-207ENST00000440538 IGLV3-32A0A0A0MS00 114 aa5.5□□□□□ -1.53
PUM1-207ENST00000440538 PRSS37A4D1T9 235 aa5.5□□□□□ -1.53
PUM1-207ENST00000440538 ACTL6AO96019 429 aa5.5□□□□□ -1.53
PUM1-207ENST00000440538 GTF2F2P13984 249 aa5.5□□□□□ -1.53
PUM1-207ENST00000440538 SLC17A1Q14916 467 aa5.5□□□□□ -1.53
PUM1-207ENST00000440538 OR51A4Q8NGJ6 313 aa5.5□□□□□ -1.53
PUM1-207ENST00000440538 RXFP4Q8TDU9 374 aa5.5□□□□□ -1.53
PUM1-207ENST00000440538 MCHR2Q969V1 340 aa5.5□□□□□ -1.53
PUM1-207ENST00000440538 VRK1Q99986 396 aaPredicted RBP5.5□□□□□ -1.53
PUM1-207ENST00000440538 TXNIPQ9H3M7 391 aa5.5□□□□□ -1.53
PUM1-207ENST00000440538 POFUT1Q9H488 388 aa5.5□□□□□ -1.53
PUM1-207ENST00000440538 ACKR4Q9NPB9 350 aa5.5□□□□□ -1.53
PUM1-207ENST00000440538 MED9Q9NWA0 146 aa5.5□□□□□ -1.53
PUM1-207ENST00000440538 HIF3AQ9Y2N7 669 aa5.5□□□□□ -1.53
PUM1-207ENST00000440538 EMC9Q9Y3B6 208 aa5.5□□□□□ -1.53
PUM1-207ENST00000440538 HEATR1Q9H583 2144 aaKnown RBP5.49□□□□□ -1.53
PUM1-207ENST00000440538 RER1O15258 196 aa5.49□□□□□ -1.53
PUM1-207ENST00000440538 TRAF3IP2O43734 574 aaPredicted RBP5.49□□□□□ -1.53
PUM1-207ENST00000440538 ZFPL1O95159 310 aa5.49□□□□□ -1.53
PUM1-207ENST00000440538 FARS2O95363 451 aaKnown RBP5.49□□□□□ -1.53
PUM1-207ENST00000440538 CPN1P15169 458 aa5.49□□□□□ -1.53
PUM1-207ENST00000440538 SPI1P17947 270 aa5.49□□□□□ -1.53
PUM1-207ENST00000440538 GALP22466 123 aa5.49□□□□□ -1.53
PUM1-207ENST00000440538 DAP3P51398 398 aaKnown RBP5.49□□□□□ -1.53
PUM1-207ENST00000440538 BLOC1S1P78537 153 aa5.49□□□□□ -1.53
PUM1-207ENST00000440538 ACSF3Q4G176 576 aaPredicted RBP5.49□□□□□ -1.53
PUM1-207ENST00000440538 RAB12Q6IQ22 244 aa5.49□□□□□ -1.53
PUM1-207ENST00000440538 OR51D1Q8NGF3 324 aa5.49□□□□□ -1.53
PUM1-207ENST00000440538 PPP1R14AQ96A00 147 aa5.49□□□□□ -1.53
PUM1-207ENST00000440538 SMIM19Q96E16 107 aa5.49□□□□□ -1.53
PUM1-207ENST00000440538 SLC19A3Q9BZV2 496 aa5.49□□□□□ -1.53
PUM1-207ENST00000440538 CMC2Q9NRP2 79 aa5.49□□□□□ -1.53
PUM1-207ENST00000440538 RASL12Q9NYN1 266 aa5.49□□□□□ -1.53
PUM1-207ENST00000440538 KCNG2Q9UJ96 466 aa5.49□□□□□ -1.53
PUM1-207ENST00000440538 FZR1Q9UM11 496 aa5.49□□□□□ -1.53
PUM1-207ENST00000440538 PLCE1Q9P212 2302 aa5.49□□□□□ -1.53
PUM1-207ENST00000440538 TRAV8-7A0A075B6U6 113 aa5.49□□□□□ -1.53
PUM1-207ENST00000440538 TRAV18A0A075B6X5 111 aa5.49□□□□□ -1.53
PUM1-207ENST00000440538 TRAV1-2A0A0B4J238 106 aa5.49□□□□□ -1.53
PUM1-207ENST00000440538 SLC22A31A6NKX4 558 aa5.49□□□□□ -1.53
PUM1-207ENST00000440538 MPTX1A8MV57 137 aa5.49□□□□□ -1.53
PUM1-207ENST00000440538 OR8G3PP0DMU2 310 aa5.49□□□□□ -1.53
PUM1-207ENST00000440538 ZNF17P17021 662 aa5.49□□□□□ -1.53
PUM1-207ENST00000440538 CALCRP30988 508 aa5.49□□□□□ -1.53
PUM1-207ENST00000440538 PTGFRP43088 359 aa5.49□□□□□ -1.53
PUM1-207ENST00000440538 IDH3GP51553 393 aaPredicted RBP5.49□□□□□ -1.53
PUM1-207ENST00000440538 ARF1P84077 181 aaKnown RBP5.49□□□□□ -1.53
PUM1-207ENST00000440538 FHL1Q13642 323 aa5.49□□□□□ -1.53
PUM1-207ENST00000440538 LY6G6FQ5SQ64 297 aa5.49□□□□□ -1.53
PUM1-207ENST00000440538 RHOUQ7L0Q8 258 aa5.49□□□□□ -1.53
PUM1-207ENST00000440538 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.49□□□□□ -1.53
PUM1-207ENST00000440538 THAP6Q8TBB0 222 aa5.49□□□□□ -1.53
PUM1-207ENST00000440538 CA5BP1Q8WTZ4 195 aa5.49□□□□□ -1.53
PUM1-207ENST00000440538 SLC25A44Q96H78 314 aaPredicted RBP5.49□□□□□ -1.53
PUM1-207ENST00000440538 CYYR1Q96J86 154 aa5.49□□□□□ -1.53
PUM1-207ENST00000440538 PLEK2Q9NYT0 353 aa5.49□□□□□ -1.53
PUM1-207ENST00000440538 PLEKHA6Q9Y2H5 1048 aa5.49□□□□□ -1.53
PUM1-207ENST00000440538 V9GY05 133 aa5.49□□□□□ -1.53
PUM1-207ENST00000440538 TACC2O95359 2948 aa5.49□□□□□ -1.53
PUM1-207ENST00000440538 ZNF705EA8MWA4 302 aaPredicted RBP5.49□□□□□ -1.53
PUM1-207ENST00000440538 AGPAT2O15120 278 aa5.49□□□□□ -1.53
PUM1-207ENST00000440538 ARL6IP5O75915 188 aa5.49□□□□□ -1.53
PUM1-207ENST00000440538 PMS2P2O95744 297 aa5.49□□□□□ -1.53
PUM1-207ENST00000440538 ECDO95905 644 aaPredicted RBP5.49□□□□□ -1.53
PUM1-207ENST00000440538 SLC2A5P22732 501 aa5.49□□□□□ -1.53
PUM1-207ENST00000440538 GRNP28799 593 aaKnown RBP5.49□□□□□ -1.53
PUM1-207ENST00000440538 ATP1B3P54709 279 aa5.49□□□□□ -1.53
PUM1-207ENST00000440538 NKPD1Q17RQ9 610 aa5.49□□□□□ -1.53
PUM1-207ENST00000440538 SPATA46Q5T0L3 261 aa5.49□□□□□ -1.53
PUM1-207ENST00000440538 TMEM200AQ86VY9 491 aa5.49□□□□□ -1.53
PUM1-207ENST00000440538 WFDC8Q8IUA0 241 aa5.49□□□□□ -1.53
PUM1-207ENST00000440538 SLC35F2Q8IXU6 374 aa5.49□□□□□ -1.53
PUM1-207ENST00000440538 NPEPL1Q8NDH3 523 aa5.49□□□□□ -1.53
PUM1-207ENST00000440538 STEAP2Q8NFT2 490 aa5.49□□□□□ -1.53
PUM1-207ENST00000440538 OR6K3Q8NGY3 331 aa5.49□□□□□ -1.53
PUM1-207ENST00000440538 SFT2D1Q8WV19 159 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms