RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 AVPI1Q5T686 147 aa12.45□□□□□ -0.42
LIMD1-202ENST00000440097 DEFB124Q8NES8 71 aa12.45□□□□□ -0.42
LIMD1-202ENST00000440097 RXFP4Q8TDU9 374 aa12.45□□□□□ -0.42
LIMD1-202ENST00000440097 PPP1R1CQ8WVI7 109 aa12.45□□□□□ -0.42
LIMD1-202ENST00000440097 KCNE4Q8WWG9 221 aa12.45□□□□□ -0.42
LIMD1-202ENST00000440097 TINAGL1Q9GZM7 467 aaPredicted RBP12.45□□□□□ -0.42
LIMD1-202ENST00000440097 NOP16Q9Y3C1 178 aaKnown RBP12.45□□□□□ -0.42
LIMD1-202ENST00000440097 OR2AT4A6NND4 320 aa12.45□□□□□ -0.42
LIMD1-202ENST00000440097 SLC17A2O00624 439 aa12.45□□□□□ -0.42
LIMD1-202ENST00000440097 KCNAB3O43448 404 aa12.45□□□□□ -0.42
LIMD1-202ENST00000440097 RAB3DO95716 219 aa12.45□□□□□ -0.42
LIMD1-202ENST00000440097 IFNA4P05014 189 aa12.45□□□□□ -0.42
LIMD1-202ENST00000440097 ISG15P05161 165 aa12.45□□□□□ -0.42
LIMD1-202ENST00000440097 ACAA1P09110 424 aaPredicted RBP12.45□□□□□ -0.42
LIMD1-202ENST00000440097 DHRS2Q13268 280 aa12.45□□□□□ -0.42
LIMD1-202ENST00000440097 HIST3H3Q16695 136 aa12.45□□□□□ -0.42
LIMD1-202ENST00000440097 GALNT16Q8N428 558 aa12.45□□□□□ -0.42
LIMD1-202ENST00000440097 OR10D3Q8NH80 312 aa12.45□□□□□ -0.42
LIMD1-202ENST00000440097 ATG5Q9H1Y0 275 aa12.45□□□□□ -0.42
LIMD1-202ENST00000440097 ZFP57Q9NU63 452 aa12.45□□□□□ -0.42
LIMD1-202ENST00000440097 SLC5A6Q9Y289 635 aa12.45□□□□□ -0.42
LIMD1-202ENST00000440097 F5H5K5 113 aa12.44□□□□□ -0.42
LIMD1-202ENST00000440097 SULT1C2O00338 296 aa12.44□□□□□ -0.42
LIMD1-202ENST00000440097 AMY2AP04746 511 aa12.44□□□□□ -0.42
LIMD1-202ENST00000440097 MSR1P21757 451 aa12.44□□□□□ -0.42
LIMD1-202ENST00000440097 ZNF121P58317 390 aaPredicted RBP12.44□□□□□ -0.42
LIMD1-202ENST00000440097 B3GALT5-AS1P59052 145 aa12.44□□□□□ -0.42
LIMD1-202ENST00000440097 OR1C1Q15619 314 aa12.44□□□□□ -0.42
LIMD1-202ENST00000440097 PLEKHN1Q494U1 663 aaPredicted RBP12.44□□□□□ -0.42
LIMD1-202ENST00000440097 ATPAF1Q5TC12 328 aaPredicted RBP12.44□□□□□ -0.42
LIMD1-202ENST00000440097 LIN54Q6MZP7 749 aa12.44□□□□□ -0.42
LIMD1-202ENST00000440097 DMBX1Q8NFW5 382 aa12.44□□□□□ -0.42
LIMD1-202ENST00000440097 FAM71F1Q96KD3 344 aaPredicted RBP12.44□□□□□ -0.42
LIMD1-202ENST00000440097 TMEM231Q9H6L2 316 aa12.44□□□□□ -0.42
LIMD1-202ENST00000440097 MED13Q9UHV7 2174 aa12.44□□□□□ -0.42
LIMD1-202ENST00000440097 PCSK5Q92824 1860 aa12.44□□□□□ -0.42
LIMD1-202ENST00000440097 FAM166BA8MTA8 275 aa12.44□□□□□ -0.42
LIMD1-202ENST00000440097 CX3CR1P49238 355 aa12.44□□□□□ -0.42
LIMD1-202ENST00000440097 CAPZA1P52907 286 aa12.44□□□□□ -0.42
LIMD1-202ENST00000440097 SUCLG1P53597 346 aaKnown RBP12.44□□□□□ -0.42
LIMD1-202ENST00000440097 TGIF1Q15583 401 aa12.44□□□□□ -0.42
LIMD1-202ENST00000440097 C10orf91Q5T1B1 145 aa12.44□□□□□ -0.42
LIMD1-202ENST00000440097 FAM57BQ71RH2 274 aa12.44□□□□□ -0.42
LIMD1-202ENST00000440097 GPX8Q8TED1 209 aa12.44□□□□□ -0.42
LIMD1-202ENST00000440097 NKD1Q969G9 470 aa12.44□□□□□ -0.42
LIMD1-202ENST00000440097 NELFAQ9H3P2 528 aa12.44□□□□□ -0.42
LIMD1-202ENST00000440097 PLEKHA6Q9Y2H5 1048 aa12.44□□□□□ -0.42
LIMD1-202ENST00000440097 CARHSP1Q9Y2V2 147 aaKnown RBP12.44□□□□□ -0.42
LIMD1-202ENST00000440097 LOC100289279A0A1B0GTE1 492 aa12.43□□□□□ -0.42
LIMD1-202ENST00000440097 SPAARA0A1B0GVQ0 90 aa12.43□□□□□ -0.42
LIMD1-202ENST00000440097 MEX3AA1L020 520 aaKnown RBP12.43□□□□□ -0.42
LIMD1-202ENST00000440097 DHHO43323 396 aa12.43□□□□□ -0.42
LIMD1-202ENST00000440097 NEURL1O76050 574 aa12.43□□□□□ -0.42
LIMD1-202ENST00000440097 MELTFP08582 738 aa12.43□□□□□ -0.42
LIMD1-202ENST00000440097 ZNF20P17024 532 aa12.43□□□□□ -0.42
LIMD1-202ENST00000440097 NFYBP25208 207 aa12.43□□□□□ -0.42
LIMD1-202ENST00000440097 ZNF84P51523 738 aa12.43□□□□□ -0.42
LIMD1-202ENST00000440097 SCAND1P57086 179 aa12.43□□□□□ -0.42
LIMD1-202ENST00000440097 TAS2R19P59542 299 aa12.43□□□□□ -0.42
LIMD1-202ENST00000440097 PDZK1IP1Q13113 114 aa12.43□□□□□ -0.42
LIMD1-202ENST00000440097 ATP1A1-AS1Q5TC04 95 aa12.43□□□□□ -0.42
LIMD1-202ENST00000440097 ZNF813Q6ZN06 617 aa12.43□□□□□ -0.42
LIMD1-202ENST00000440097 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.43□□□□□ -0.42
LIMD1-202ENST00000440097 SUMF1Q8NBK3 374 aa12.43□□□□□ -0.42
LIMD1-202ENST00000440097 OR13C9Q8NGT0 318 aa12.43□□□□□ -0.42
LIMD1-202ENST00000440097 B4GALT7Q9UBV7 327 aa12.43□□□□□ -0.42
LIMD1-202ENST00000440097 RP1L1Q8IWN7 2480 aaPredicted RBP12.43□□□□□ -0.42
LIMD1-202ENST00000440097 TRAV20A0A0B4J274 112 aa12.43□□□□□ -0.42
LIMD1-202ENST00000440097 MEGF11A6BM72 1044 aa12.43□□□□□ -0.42
LIMD1-202ENST00000440097 FAM25EA8MYX2 175 aa12.43□□□□□ -0.42
LIMD1-202ENST00000440097 SGCEO43556 437 aa12.43□□□□□ -0.42
LIMD1-202ENST00000440097 SNAPINO95295 136 aa12.43□□□□□ -0.42
LIMD1-202ENST00000440097 HLA-AP01891 365 aaKnown RBP12.43□□□□□ -0.42
LIMD1-202ENST00000440097 ACTBP60709 375 aa12.43□□□□□ -0.42
LIMD1-202ENST00000440097 ACTG1P63261 375 aa12.43□□□□□ -0.42
LIMD1-202ENST00000440097 PLGLB1Q02325 96 aa12.43□□□□□ -0.42
LIMD1-202ENST00000440097 SRSF4Q08170 494 aaKnown RBP12.43□□□□□ -0.42
LIMD1-202ENST00000440097 ZNF627Q7L945 461 aa12.43□□□□□ -0.42
LIMD1-202ENST00000440097 SLC16A13Q7RTY0 426 aa12.43□□□□□ -0.42
LIMD1-202ENST00000440097 GGNQ86UU5 652 aa12.43□□□□□ -0.42
LIMD1-202ENST00000440097 OR2M7Q8NG81 312 aa12.43□□□□□ -0.42
LIMD1-202ENST00000440097 OR2V1Q8NHB1 315 aa12.43□□□□□ -0.42
LIMD1-202ENST00000440097 ALKBH3Q96Q83 286 aaPredicted RBP12.43□□□□□ -0.42
LIMD1-202ENST00000440097 FAM173AQ9BQD7 235 aa12.43□□□□□ -0.42
LIMD1-202ENST00000440097 TREM1Q9NP99 234 aa12.43□□□□□ -0.42
LIMD1-202ENST00000440097 NCKAP5O14513 1909 aa12.43□□□□□ -0.42
LIMD1-202ENST00000440097 FGF16O43320 207 aa12.42□□□□□ -0.42
LIMD1-202ENST00000440097 FABP1P07148 127 aa12.42□□□□□ -0.42
LIMD1-202ENST00000440097 ANOS1P23352 680 aa12.42□□□□□ -0.42
LIMD1-202ENST00000440097 AIMP2Q13155 320 aaKnown RBP12.42□□□□□ -0.42
LIMD1-202ENST00000440097 SCGB2B2Q4G0G5 96 aa12.42□□□□□ -0.42
LIMD1-202ENST00000440097 OR10K2Q6IF99 312 aa12.42□□□□□ -0.42
LIMD1-202ENST00000440097 PGAP1Q75T13 922 aa12.42□□□□□ -0.42
LIMD1-202ENST00000440097 ZNF837Q96EG3 531 aaPredicted RBP12.42□□□□□ -0.42
LIMD1-202ENST00000440097 ADAT3Q96EY9 351 aaPredicted RBP12.42□□□□□ -0.42
LIMD1-202ENST00000440097 ZNF845Q96IR2 970 aaPredicted RBP12.42□□□□□ -0.42
LIMD1-202ENST00000440097 CNTNAP3BQ96NU0 1288 aa12.42□□□□□ -0.42
LIMD1-202ENST00000440097 SLC25A21Q9BQT8 299 aaPredicted RBP12.42□□□□□ -0.42
LIMD1-202ENST00000440097 PLEK2Q9NYT0 353 aa12.42□□□□□ -0.42
LIMD1-202ENST00000440097 FSTP19883 344 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms