RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 U3KQA8 63 aa11.88□□□□□ -0.51
HERPUD1-204ENST00000439977 FAM230AA0A1W2PPH8 454 aa11.87□□□□□ -0.51
HERPUD1-204ENST00000439977 NPIPA2E9PIF3 369 aa11.87□□□□□ -0.51
HERPUD1-204ENST00000439977 NPIPA3F8WFD2 350 aa11.87□□□□□ -0.51
HERPUD1-204ENST00000439977 TNFSF11O14788 317 aa11.87□□□□□ -0.51
HERPUD1-204ENST00000439977 FBXO24O75426 580 aa11.87□□□□□ -0.51
HERPUD1-204ENST00000439977 MSR1P21757 451 aa11.87□□□□□ -0.51
HERPUD1-204ENST00000439977 CXCL12P48061 93 aa11.87□□□□□ -0.51
HERPUD1-204ENST00000439977 ENDOGQ14249 297 aaKnown RBP11.87□□□□□ -0.51
HERPUD1-204ENST00000439977 TAF9Q16594 264 aa11.87□□□□□ -0.51
HERPUD1-204ENST00000439977 HIST3H3Q16695 136 aa11.87□□□□□ -0.51
HERPUD1-204ENST00000439977 SP6Q3SY56 376 aa11.87□□□□□ -0.51
HERPUD1-204ENST00000439977 SPEM1Q8N4L4 309 aa11.87□□□□□ -0.51
HERPUD1-204ENST00000439977 RNF138Q8WVD3 245 aa11.87□□□□□ -0.51
HERPUD1-204ENST00000439977 SAV1Q9H4B6 383 aaPredicted RBP11.87□□□□□ -0.51
HERPUD1-204ENST00000439977 PLEKHJ1Q9NW61 149 aa11.87□□□□□ -0.51
HERPUD1-204ENST00000439977 SERPINA5P05154 406 aa11.87□□□□□ -0.51
HERPUD1-204ENST00000439977 GRB2P62993 217 aaKnown RBP11.87□□□□□ -0.51
HERPUD1-204ENST00000439977 ECH1Q13011 328 aa11.87□□□□□ -0.51
HERPUD1-204ENST00000439977 RPL7L1Q6DKI1 246 aaKnown RBP11.87□□□□□ -0.51
HERPUD1-204ENST00000439977 OR2A2Q6IF42 318 aa11.87□□□□□ -0.51
HERPUD1-204ENST00000439977 CLRN3Q8NCR9 226 aa11.87□□□□□ -0.51
HERPUD1-204ENST00000439977 FBXO17Q96EF6 278 aa11.87□□□□□ -0.51
HERPUD1-204ENST00000439977 FAAP24Q9BTP7 215 aa11.87□□□□□ -0.51
HERPUD1-204ENST00000439977 PCED1AQ9H1Q7 454 aa11.87□□□□□ -0.51
HERPUD1-204ENST00000439977 PCDHB16Q9NRJ7 776 aa11.87□□□□□ -0.51
HERPUD1-204ENST00000439977 PTRH2Q9Y3E5 179 aaKnown RBP11.87□□□□□ -0.51
HERPUD1-204ENST00000439977 COL5A1P20908 1838 aaPredicted RBP11.87□□□□□ -0.51
HERPUD1-204ENST00000439977 M0R135 149 aa11.87□□□□□ -0.51
HERPUD1-204ENST00000439977 SCGB1D2O95969 90 aa11.87□□□□□ -0.51
HERPUD1-204ENST00000439977 F10P00742 488 aa11.87□□□□□ -0.51
HERPUD1-204ENST00000439977 NAT1P18440 290 aa11.87□□□□□ -0.51
HERPUD1-204ENST00000439977 FPR2P25090 351 aa11.87□□□□□ -0.51
HERPUD1-204ENST00000439977 SLC35A1P78382 337 aa11.87□□□□□ -0.51
HERPUD1-204ENST00000439977 CYCSP99999 105 aaKnown RBP11.87□□□□□ -0.51
HERPUD1-204ENST00000439977 AKIRIN2Q53H80 203 aa11.87□□□□□ -0.51
HERPUD1-204ENST00000439977 ZNF468Q5VIY5 522 aaPredicted RBP11.87□□□□□ -0.51
HERPUD1-204ENST00000439977 LDLRAD3Q86YD5 345 aa11.87□□□□□ -0.51
HERPUD1-204ENST00000439977 GJC3Q8NFK1 279 aa11.87□□□□□ -0.51
HERPUD1-204ENST00000439977 OR4A4PQ8NGN8 299 aa11.87□□□□□ -0.51
HERPUD1-204ENST00000439977 TOMM40LQ969M1 308 aa11.87□□□□□ -0.51
HERPUD1-204ENST00000439977 ZNF799Q96GE5 643 aa11.87□□□□□ -0.51
HERPUD1-204ENST00000439977 AIFM2Q9BRQ8 373 aa11.87□□□□□ -0.51
HERPUD1-204ENST00000439977 ZNF2Q9BSG1 426 aaPredicted RBP11.87□□□□□ -0.51
HERPUD1-204ENST00000439977 HDGFL3Q9Y3E1 203 aa11.87□□□□□ -0.51
HERPUD1-204ENST00000439977 URB1O60287 2271 aaKnown RBP11.86□□□□□ -0.51
HERPUD1-204ENST00000439977 CCDC85CA6NKD9 419 aa11.86□□□□□ -0.51
HERPUD1-204ENST00000439977 FARS2O95363 451 aaKnown RBP11.86□□□□□ -0.51
HERPUD1-204ENST00000439977 CCL4P13236 92 aa11.86□□□□□ -0.51
HERPUD1-204ENST00000439977 NME2P22392 152 aa11.86□□□□□ -0.51
HERPUD1-204ENST00000439977 ACKR3P25106 362 aa11.86□□□□□ -0.51
HERPUD1-204ENST00000439977 PTGER4P35408 488 aa11.86□□□□□ -0.51
HERPUD1-204ENST00000439977 MTCP1P56278 107 aa11.86□□□□□ -0.51
HERPUD1-204ENST00000439977 CCDC36Q8IYA8 594 aa11.86□□□□□ -0.51
HERPUD1-204ENST00000439977 SEMA6DQ8NFY4 1073 aa11.86□□□□□ -0.51
HERPUD1-204ENST00000439977 RNF141Q8WVD5 230 aa11.86□□□□□ -0.51
HERPUD1-204ENST00000439977 MR1Q95460 341 aa11.86□□□□□ -0.51
HERPUD1-204ENST00000439977 NECAB3Q96P71 396 aaPredicted RBP11.86□□□□□ -0.51
HERPUD1-204ENST00000439977 PIGQQ9BRB3 760 aa11.86□□□□□ -0.51
HERPUD1-204ENST00000439977 SLC26A1Q9H2B4 701 aa11.86□□□□□ -0.51
HERPUD1-204ENST00000439977 NELFAQ9H3P2 528 aa11.86□□□□□ -0.51
HERPUD1-204ENST00000439977 PISDQ9UG56 409 aa11.86□□□□□ -0.51
HERPUD1-204ENST00000439977 OSGIN2Q9Y236 505 aa11.86□□□□□ -0.51
HERPUD1-204ENST00000439977 IGLV3-32A0A0A0MS00 114 aa11.86□□□□□ -0.51
HERPUD1-204ENST00000439977 PMS2P1A4D2B8 440 aa11.86□□□□□ -0.51
HERPUD1-204ENST00000439977 F8VVB4 439 aa11.86□□□□□ -0.51
HERPUD1-204ENST00000439977 F8VWA3 439 aa11.86□□□□□ -0.51
HERPUD1-204ENST00000439977 LRP3O75074 770 aa11.86□□□□□ -0.51
HERPUD1-204ENST00000439977 CD63P08962 238 aa11.86□□□□□ -0.51
HERPUD1-204ENST00000439977 RPS2P15880 293 aaKnown RBP11.86□□□□□ -0.51
HERPUD1-204ENST00000439977 CCL1P22362 96 aa11.86□□□□□ -0.51
HERPUD1-204ENST00000439977 EPHA8P29322 1005 aaPredicted RBP11.86□□□□□ -0.51
HERPUD1-204ENST00000439977 TSPO2Q5TGU0 170 aa11.86□□□□□ -0.51
HERPUD1-204ENST00000439977 H3F3CQ6NXT2 135 aa11.86□□□□□ -0.51
HERPUD1-204ENST00000439977 PRSS54Q6PEW0 395 aa11.86□□□□□ -0.51
HERPUD1-204ENST00000439977 LHFPL1Q86WI0 220 aa11.86□□□□□ -0.51
HERPUD1-204ENST00000439977 TMEM156Q8N614 296 aa11.86□□□□□ -0.51
HERPUD1-204ENST00000439977 FADS6Q8N9I5 356 aa11.86□□□□□ -0.51
HERPUD1-204ENST00000439977 SSC4DQ8WTU2 575 aa11.86□□□□□ -0.51
HERPUD1-204ENST00000439977 RAB18Q9NP72 206 aa11.86□□□□□ -0.51
HERPUD1-204ENST00000439977 C19orf25Q9UFG5 118 aaPredicted RBP11.86□□□□□ -0.51
HERPUD1-204ENST00000439977 B3GALT1Q9Y5Z6 326 aa11.86□□□□□ -0.51
HERPUD1-204ENST00000439977 K7ESF4 209 aa11.85□□□□□ -0.51
HERPUD1-204ENST00000439977 TP53I11O14683 189 aa11.85□□□□□ -0.51
HERPUD1-204ENST00000439977 DHRS3O75911 302 aa11.85□□□□□ -0.51
HERPUD1-204ENST00000439977 FAM157CP0CG43 387 aa11.85□□□□□ -0.51
HERPUD1-204ENST00000439977 PCOLCEQ15113 449 aa11.85□□□□□ -0.51
HERPUD1-204ENST00000439977 IAH1Q2TAA2 248 aaPredicted RBP11.85□□□□□ -0.51
HERPUD1-204ENST00000439977 FAM89BQ8N5H3 189 aa11.85□□□□□ -0.51
HERPUD1-204ENST00000439977 SLC30A7Q8NEW0 376 aa11.85□□□□□ -0.51
HERPUD1-204ENST00000439977 ULBP2Q9BZM5 246 aa11.85□□□□□ -0.51
HERPUD1-204ENST00000439977 TOX3O15405 576 aaPredicted RBP11.85□□□□□ -0.51
HERPUD1-204ENST00000439977 FGF16O43320 207 aa11.85□□□□□ -0.51
HERPUD1-204ENST00000439977 DHHO43323 396 aa11.85□□□□□ -0.51
HERPUD1-204ENST00000439977 DKK1O94907 266 aa11.85□□□□□ -0.51
HERPUD1-204ENST00000439977 NFYBP25208 207 aa11.85□□□□□ -0.51
HERPUD1-204ENST00000439977 NTF4P34130 210 aa11.85□□□□□ -0.51
HERPUD1-204ENST00000439977 EIF1P41567 113 aaKnown RBP11.85□□□□□ -0.51
HERPUD1-204ENST00000439977 FXYD4P59646 89 aa11.85□□□□□ -0.51
HERPUD1-204ENST00000439977 H3F3AP84243 136 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms