RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 NARS2Q96I59 477 aaKnown RBP2.01□□□□□ -2.09
VPS41-207ENST00000439468 CAMK2N2Q96S95 79 aa2.01□□□□□ -2.09
VPS41-207ENST00000439468 HSD17B10Q99714 261 aaKnown RBP2.01□□□□□ -2.09
VPS41-207ENST00000439468 GGTLC1Q9BX51 225 aa2.01□□□□□ -2.09
VPS41-207ENST00000439468 SAMD10Q9BYL1 202 aa2.01□□□□□ -2.09
VPS41-207ENST00000439468 TMEM27Q9HBJ8 222 aa2.01□□□□□ -2.09
VPS41-207ENST00000439468 CRLF2Q9HC73 371 aa2.01□□□□□ -2.09
VPS41-207ENST00000439468 MYOZ1Q9NP98 299 aaPredicted RBP2.01□□□□□ -2.09
VPS41-207ENST00000439468 PRSS16Q9NQE7 514 aa2.01□□□□□ -2.09
VPS41-207ENST00000439468 DDX19AQ9NUU7 478 aaKnown RBP2.01□□□□□ -2.09
VPS41-207ENST00000439468 TMEM14AQ9Y6G1 99 aa2.01□□□□□ -2.09
VPS41-207ENST00000439468 ADGRB1O14514 1584 aa2.01□□□□□ -2.09
VPS41-207ENST00000439468 PLXNA3P51805 1871 aa2.01□□□□□ -2.09
VPS41-207ENST00000439468 AFDNP55196 1824 aaKnown RBP2.01□□□□□ -2.09
VPS41-207ENST00000439468 LAMB1P07942 1786 aa2□□□□□ -2.09
VPS41-207ENST00000439468 ARFGEF2Q9Y6D5 1785 aa2□□□□□ -2.09
VPS41-207ENST00000439468 MON2Q7Z3U7 1717 aa2□□□□□ -2.09
VPS41-207ENST00000439468 IGLV4-60A0A075B6I1 120 aa2□□□□□ -2.09
VPS41-207ENST00000439468 IGKV1-27A0A075B6S5 117 aa2□□□□□ -2.09
VPS41-207ENST00000439468 TRAV19A0A0A6YYK7 116 aa2□□□□□ -2.09
VPS41-207ENST00000439468 IGHV1OR15-9A0A0B4J2B8 117 aa2□□□□□ -2.09
VPS41-207ENST00000439468 A0A1B0GTQ1 180 aa2□□□□□ -2.09
VPS41-207ENST00000439468 ZNF99A8MXY4 864 aaPredicted RBP2□□□□□ -2.09
VPS41-207ENST00000439468 SOCS1O15524 211 aa2□□□□□ -2.09
VPS41-207ENST00000439468 SLC19A2O60779 497 aa2□□□□□ -2.09
VPS41-207ENST00000439468 SEMA3DO95025 777 aa2□□□□□ -2.09
VPS41-207ENST00000439468 HPRT1P00492 218 aa2□□□□□ -2.09
VPS41-207ENST00000439468 CISD3P0C7P0 127 aa2□□□□□ -2.09
VPS41-207ENST00000439468 GGT2P36268 569 aa2□□□□□ -2.09
VPS41-207ENST00000439468 TNFSF9P41273 254 aa2□□□□□ -2.09
VPS41-207ENST00000439468 OR1G1P47890 313 aa2□□□□□ -2.09
VPS41-207ENST00000439468 FABP6P51161 128 aa2□□□□□ -2.09
VPS41-207ENST00000439468 GFERP55789 205 aa2□□□□□ -2.09
VPS41-207ENST00000439468 TAS2R31P59538 309 aa2□□□□□ -2.09
VPS41-207ENST00000439468 CDC20Q12834 499 aa2□□□□□ -2.09
VPS41-207ENST00000439468 RPEL1Q2QD12 228 aa2□□□□□ -2.09
VPS41-207ENST00000439468 C5orf47Q569G3 176 aa2□□□□□ -2.09
VPS41-207ENST00000439468 SLC16A13Q7RTY0 426 aa2□□□□□ -2.09
VPS41-207ENST00000439468 ZNF547Q8IVP9 402 aa2□□□□□ -2.09
VPS41-207ENST00000439468 UBALD2Q8IYN6 164 aa2□□□□□ -2.09
VPS41-207ENST00000439468 VKORC1L1Q8N0U8 176 aa2□□□□□ -2.09
VPS41-207ENST00000439468 ZNF461Q8TAF7 563 aa2□□□□□ -2.09
VPS41-207ENST00000439468 RAB1CQ92928 201 aa2□□□□□ -2.09
VPS41-207ENST00000439468 L3HYPDHQ96EM0 354 aa2□□□□□ -2.09
VPS41-207ENST00000439468 C18orf15Q96N68 181 aa2□□□□□ -2.09
VPS41-207ENST00000439468 RBBP8Q99708 897 aa2□□□□□ -2.09
VPS41-207ENST00000439468 TMEM243Q9BU79 118 aa2□□□□□ -2.09
VPS41-207ENST00000439468 ZNF442Q9H7R0 627 aa2□□□□□ -2.09
VPS41-207ENST00000439468 MED4Q9NPJ6 270 aa2□□□□□ -2.09
VPS41-207ENST00000439468 RPRD1BQ9NQG5 326 aaKnown RBP2□□□□□ -2.09
VPS41-207ENST00000439468 FBXO6Q9NRD1 293 aaPredicted RBP2□□□□□ -2.09
VPS41-207ENST00000439468 C8orf17Q9NRJ1 99 aa2□□□□□ -2.09
VPS41-207ENST00000439468 DDX19BQ9UMR2 479 aa2□□□□□ -2.09
VPS41-207ENST00000439468 CAB39Q9Y376 341 aaPredicted RBP2□□□□□ -2.09
VPS41-207ENST00000439468 HYOU1Q9Y4L1 999 aa2□□□□□ -2.09
VPS41-207ENST00000439468 SSC5DA1L4H1 1573 aa2□□□□□ -2.09
VPS41-207ENST00000439468 MAP1BP46821 2468 aaKnown RBP2□□□□□ -2.09
VPS41-207ENST00000439468 YTHDC2Q9H6S0 1430 aaKnown RBP2□□□□□ -2.09
VPS41-207ENST00000439468 IGHV1-69DA0A0B4J2H0 117 aa1.99□□□□□ -2.09
VPS41-207ENST00000439468 TMEM120BA0PK00 339 aa1.99□□□□□ -2.09
VPS41-207ENST00000439468 KRBOX1C9JBD0 128 aa1.99□□□□□ -2.09
VPS41-207ENST00000439468 H7C0C1 242 aa1.99□□□□□ -2.09
VPS41-207ENST00000439468 ERI3O43414 337 aaKnown RBP1.99□□□□□ -2.09
VPS41-207ENST00000439468 CDC40O60508 579 aaKnown RBP eCLIP1.99□□□□□ -2.09
VPS41-207ENST00000439468 SERPINB7O75635 380 aa1.99□□□□□ -2.09
VPS41-207ENST00000439468 MPZL1O95297 269 aa1.99□□□□□ -2.09
VPS41-207ENST00000439468 IGLV3-25P01717 112 aa1.99□□□□□ -2.09
VPS41-207ENST00000439468 HLA-DQA1P01909 254 aa1.99□□□□□ -2.09
VPS41-207ENST00000439468 HLA-DQB1P01920 261 aa1.99□□□□□ -2.09
VPS41-207ENST00000439468 MYCNOSP40205 109 aa1.99□□□□□ -2.09
VPS41-207ENST00000439468 OPRK1P41145 380 aa1.99□□□□□ -2.09
VPS41-207ENST00000439468 MAGEA1P43355 309 aa1.99□□□□□ -2.09
VPS41-207ENST00000439468 GPR1P46091 355 aa1.99□□□□□ -2.09
VPS41-207ENST00000439468 CLDN8P56748 225 aa1.99□□□□□ -2.09
VPS41-207ENST00000439468 SYNJ2BPP57105 145 aa1.99□□□□□ -2.09
VPS41-207ENST00000439468 ATP6V0D1P61421 351 aa1.99□□□□□ -2.09
VPS41-207ENST00000439468 CRADDP78560 199 aa1.99□□□□□ -2.09
VPS41-207ENST00000439468 TSC22D1Q15714 1073 aa1.99□□□□□ -2.09
VPS41-207ENST00000439468 CHRFAM7AQ494W8 412 aa1.99□□□□□ -2.09
VPS41-207ENST00000439468 CST9Q5W186 159 aa1.99□□□□□ -2.09
VPS41-207ENST00000439468 PLCXD3Q63HM9 321 aa1.99□□□□□ -2.09
VPS41-207ENST00000439468 TTC19Q6DKK2 380 aaPredicted RBP1.99□□□□□ -2.09
VPS41-207ENST00000439468 ADNP2Q6IQ32 1131 aa1.99□□□□□ -2.09
VPS41-207ENST00000439468 SHISA6Q6ZSJ9 500 aa1.99□□□□□ -2.09
VPS41-207ENST00000439468 CMTM8Q8IZV2 173 aa1.99□□□□□ -2.09
VPS41-207ENST00000439468 KIF2BQ8N4N8 673 aa1.99□□□□□ -2.09
VPS41-207ENST00000439468 CSGALNACT2Q8N6G5 542 aa1.99□□□□□ -2.09
VPS41-207ENST00000439468 NECAP1Q8NC96 275 aa1.99□□□□□ -2.09
VPS41-207ENST00000439468 GPX8Q8TED1 209 aa1.99□□□□□ -2.09
VPS41-207ENST00000439468 GLYATL2Q8WU03 294 aa1.99□□□□□ -2.09
VPS41-207ENST00000439468 DCPSQ96C86 337 aaKnown RBP1.99□□□□□ -2.09
VPS41-207ENST00000439468 SGTBQ96EQ0 304 aa1.99□□□□□ -2.09
VPS41-207ENST00000439468 JSRP1Q96MG2 331 aaPredicted RBP1.99□□□□□ -2.09
VPS41-207ENST00000439468 RNF5Q99942 180 aa1.99□□□□□ -2.09
VPS41-207ENST00000439468 TIMM29Q9BSF4 260 aa1.99□□□□□ -2.09
VPS41-207ENST00000439468 RSPO3Q9BXY4 272 aaPredicted RBP1.99□□□□□ -2.09
VPS41-207ENST00000439468 IQCGQ9H095 443 aaKnown RBP1.99□□□□□ -2.09
VPS41-207ENST00000439468 ZMAT5Q9UDW3 170 aaKnown RBP1.99□□□□□ -2.09
VPS41-207ENST00000439468 PSME2Q9UL46 239 aa1.99□□□□□ -2.09
VPS41-207ENST00000439468 NRXN2Q9P2S2 1712 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms