RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 RRADP55042 308 aa8.81□□□□□ -1
CDC42SE1-202ENST00000439374 MICBQ29980 383 aa8.81□□□□□ -1
CDC42SE1-202ENST00000439374 RAET1LQ5VY80 246 aa8.81□□□□□ -1
CDC42SE1-202ENST00000439374 CCDC54Q8NEL0 328 aa8.81□□□□□ -1
CDC42SE1-202ENST00000439374 OR10G3Q8NGC4 313 aa8.81□□□□□ -1
CDC42SE1-202ENST00000439374 OR51T1Q8NGJ9 327 aa8.81□□□□□ -1
CDC42SE1-202ENST00000439374 ASB5Q8WWX0 329 aa8.81□□□□□ -1
CDC42SE1-202ENST00000439374 TMEM234Q8WY98 164 aa8.81□□□□□ -1
CDC42SE1-202ENST00000439374 S100A13Q99584 98 aa8.81□□□□□ -1
CDC42SE1-202ENST00000439374 LPAR3Q9UBY5 353 aa8.81□□□□□ -1
CDC42SE1-202ENST00000439374 OR52A1Q9UKL2 312 aa8.81□□□□□ -1
CDC42SE1-202ENST00000439374 MTCH2Q9Y6C9 303 aa8.81□□□□□ -1
CDC42SE1-202ENST00000439374 LTBP2Q14767 1821 aa8.8□□□□□ -1
CDC42SE1-202ENST00000439374 COLCA2A8K830 154 aa8.8□□□□□ -1
CDC42SE1-202ENST00000439374 BMP5P22003 454 aa8.8□□□□□ -1
CDC42SE1-202ENST00000439374 OR3A4PP47883 348 aa8.8□□□□□ -1
CDC42SE1-202ENST00000439374 FASLGP48023 281 aa8.8□□□□□ -1
CDC42SE1-202ENST00000439374 GSK3AP49840 483 aa8.8□□□□□ -1
CDC42SE1-202ENST00000439374 CFHR1Q03591 330 aa8.8□□□□□ -1
CDC42SE1-202ENST00000439374 MEF2DQ14814 521 aa8.8□□□□□ -1
CDC42SE1-202ENST00000439374 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.8□□□□□ -1
CDC42SE1-202ENST00000439374 ANKRD55Q3KP44 614 aa8.8□□□□□ -1
CDC42SE1-202ENST00000439374 CHRFAM7AQ494W8 412 aa8.8□□□□□ -1
CDC42SE1-202ENST00000439374 SLC25A45Q8N413 288 aa8.8□□□□□ -1
CDC42SE1-202ENST00000439374 TMEM156Q8N614 296 aa8.8□□□□□ -1
CDC42SE1-202ENST00000439374 LIN37Q96GY3 246 aaPredicted RBP8.8□□□□□ -1
CDC42SE1-202ENST00000439374 ARHGAP5-AS1Q96IT6 56 aa8.8□□□□□ -1
CDC42SE1-202ENST00000439374 OR8B4Q96RC9 309 aa8.8□□□□□ -1
CDC42SE1-202ENST00000439374 FRG2CA6NGY1 282 aa8.8□□□□□ -1
CDC42SE1-202ENST00000439374 HMGB3O15347 200 aaKnown RBP8.8□□□□□ -1
CDC42SE1-202ENST00000439374 SCGNO76038 276 aa8.8□□□□□ -1
CDC42SE1-202ENST00000439374 DHODHQ02127 395 aa8.8□□□□□ -1
CDC42SE1-202ENST00000439374 UNQ9370/PRO34162Q6UXP9 181 aa8.8□□□□□ -1
CDC42SE1-202ENST00000439374 FAM57BQ71RH2 274 aa8.8□□□□□ -1
CDC42SE1-202ENST00000439374 PEG10Q86TG7 708 aaKnown RBP8.8□□□□□ -1
CDC42SE1-202ENST00000439374 CDC20BQ86Y33 519 aa8.8□□□□□ -1
CDC42SE1-202ENST00000439374 OR1N1Q8NGS0 311 aa8.8□□□□□ -1
CDC42SE1-202ENST00000439374 C15orf40Q8WUR7 153 aa8.8□□□□□ -1
CDC42SE1-202ENST00000439374 RAB3CQ96E17 227 aa8.8□□□□□ -1
CDC42SE1-202ENST00000439374 TOLLIPQ9H0E2 274 aa8.8□□□□□ -1
CDC42SE1-202ENST00000439374 MRPS17Q9Y2R5 130 aaKnown RBP8.8□□□□□ -1
CDC42SE1-202ENST00000439374 CACNA1HO95180 2353 aa8.8□□□□□ -1
CDC42SE1-202ENST00000439374 CYB5BO43169 146 aa8.79□□□□□ -1
CDC42SE1-202ENST00000439374 ANGPTL7O43827 346 aa8.79□□□□□ -1
CDC42SE1-202ENST00000439374 TRAPPC6AO75865 159 aa8.79□□□□□ -1
CDC42SE1-202ENST00000439374 IGHV3-9P01782 118 aa8.79□□□□□ -1
CDC42SE1-202ENST00000439374 MMP7P09237 267 aaPredicted RBP8.79□□□□□ -1
CDC42SE1-202ENST00000439374 CCNOP22674 350 aa8.79□□□□□ -1
CDC42SE1-202ENST00000439374 ZBTB25P24278 435 aa8.79□□□□□ -1
CDC42SE1-202ENST00000439374 RPL12P30050 165 aaKnown RBP8.79□□□□□ -1
CDC42SE1-202ENST00000439374 PPP1CCP36873 323 aaKnown RBP8.79□□□□□ -1
CDC42SE1-202ENST00000439374 HSF1Q00613 529 aa8.79□□□□□ -1
CDC42SE1-202ENST00000439374 C9orf135Q5VTT2 229 aa8.79□□□□□ -1
CDC42SE1-202ENST00000439374 PLXDC2Q6UX71 529 aa8.79□□□□□ -1
CDC42SE1-202ENST00000439374 PGAP1Q75T13 922 aa8.79□□□□□ -1
CDC42SE1-202ENST00000439374 GRINAQ7Z429 371 aa8.79□□□□□ -1
CDC42SE1-202ENST00000439374 C5orf24Q7Z6I8 188 aa8.79□□□□□ -1
CDC42SE1-202ENST00000439374 ADAT3Q96EY9 351 aaPredicted RBP8.79□□□□□ -1
CDC42SE1-202ENST00000439374 CDC6Q99741 560 aa8.79□□□□□ -1
CDC42SE1-202ENST00000439374 ABHD14AQ9BUJ0 271 aa8.79□□□□□ -1
CDC42SE1-202ENST00000439374 MMP26Q9NRE1 261 aa8.79□□□□□ -1
CDC42SE1-202ENST00000439374 GDF2Q9UK05 429 aaPredicted RBP8.79□□□□□ -1
CDC42SE1-202ENST00000439374 RARRES3Q9UL19 164 aa8.79□□□□□ -1
CDC42SE1-202ENST00000439374 ZNF850A8MQ14 1090 aa8.79□□□□□ -1
CDC42SE1-202ENST00000439374 RER1O15258 196 aa8.79□□□□□ -1
CDC42SE1-202ENST00000439374 EFSO43281 561 aa8.79□□□□□ -1
CDC42SE1-202ENST00000439374 ONECUT2O95948 504 aa8.79□□□□□ -1
CDC42SE1-202ENST00000439374 SRFP11831 508 aa8.79□□□□□ -1
CDC42SE1-202ENST00000439374 MMP9P14780 707 aa8.79□□□□□ -1
CDC42SE1-202ENST00000439374 ZNF43P17038 809 aa8.79□□□□□ -1
CDC42SE1-202ENST00000439374 NDUFB7P17568 137 aa8.79□□□□□ -1
CDC42SE1-202ENST00000439374 RAB5AP20339 215 aa8.79□□□□□ -1
CDC42SE1-202ENST00000439374 ZNF93P35789 620 aaPredicted RBP8.79□□□□□ -1
CDC42SE1-202ENST00000439374 TMEM33P57088 247 aa8.79□□□□□ -1
CDC42SE1-202ENST00000439374 SPIN3Q5JUX0 258 aa8.79□□□□□ -1
CDC42SE1-202ENST00000439374 ASPHD2Q6ICH7 369 aa8.79□□□□□ -1
CDC42SE1-202ENST00000439374 LINC00114Q6XXX2 140 aa8.79□□□□□ -1
CDC42SE1-202ENST00000439374 ERGIC1Q969X5 290 aa8.79□□□□□ -1
CDC42SE1-202ENST00000439374 GNRHR2Q96P88 292 aa8.79□□□□□ -1
CDC42SE1-202ENST00000439374 SSX3Q99909 188 aa8.79□□□□□ -1
CDC42SE1-202ENST00000439374 RNF126Q9BV68 326 aa8.79□□□□□ -1
CDC42SE1-202ENST00000439374 GGACTQ9BVM4 153 aa8.79□□□□□ -1
CDC42SE1-202ENST00000439374 ACKR3P25106 362 aa8.79□□□□□ -1
CDC42SE1-202ENST00000439374 CRABP1P29762 137 aa8.79□□□□□ -1
CDC42SE1-202ENST00000439374 BLVRBP30043 206 aaPredicted RBP8.79□□□□□ -1
CDC42SE1-202ENST00000439374 TAGLN2P37802 199 aaKnown RBP8.79□□□□□ -1
CDC42SE1-202ENST00000439374 GLP1RP43220 463 aa8.79□□□□□ -1
CDC42SE1-202ENST00000439374 CXCL12P48061 93 aa8.79□□□□□ -1
CDC42SE1-202ENST00000439374 SULT1A1P50225 295 aa8.79□□□□□ -1
CDC42SE1-202ENST00000439374 AFF3P51826 1226 aaKnown RBP8.79□□□□□ -1
CDC42SE1-202ENST00000439374 RPS16P62249 146 aaKnown RBP8.79□□□□□ -1
CDC42SE1-202ENST00000439374 MFAP5Q13361 173 aa8.79□□□□□ -1
CDC42SE1-202ENST00000439374 SURF2Q15527 256 aaPredicted RBP8.79□□□□□ -1
CDC42SE1-202ENST00000439374 GUK1Q16774 197 aa8.79□□□□□ -1
CDC42SE1-202ENST00000439374 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.79□□□□□ -1
CDC42SE1-202ENST00000439374 DMRTC2Q8IXT2 367 aaPredicted RBP8.79□□□□□ -1
CDC42SE1-202ENST00000439374 TXNIPQ9H3M7 391 aa8.79□□□□□ -1
CDC42SE1-202ENST00000439374 DNAJB11Q9UBS4 358 aa8.79□□□□□ -1
CDC42SE1-202ENST00000439374 WNT16Q9UBV4 365 aa8.79□□□□□ -1
CDC42SE1-202ENST00000439374 RAB22AQ9UL26 194 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms