RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 PPP1R3EQ9H7J1 279 aa17.65■□□□□ 0.42
CHD3-204ENST00000439235 FBXO9Q9UK97 447 aaPredicted RBP17.65■□□□□ 0.42
CHD3-204ENST00000439235 A0A0G2JK05 382 aa17.64■□□□□ 0.41
CHD3-204ENST00000439235 ZSCAN5BA6NJL1 495 aa17.64■□□□□ 0.41
CHD3-204ENST00000439235 M0R233 179 aa17.64■□□□□ 0.41
CHD3-204ENST00000439235 MLNRO43193 412 aa17.64■□□□□ 0.41
CHD3-204ENST00000439235 TMEM127O75204 238 aa17.64■□□□□ 0.41
CHD3-204ENST00000439235 NCR1O76036 304 aa17.64■□□□□ 0.41
CHD3-204ENST00000439235 ZNF93P35789 620 aaPredicted RBP17.64■□□□□ 0.41
CHD3-204ENST00000439235 ALDH3B1P43353 468 aa17.64■□□□□ 0.41
CHD3-204ENST00000439235 RBP2P50120 134 aa17.64■□□□□ 0.41
CHD3-204ENST00000439235 SNRPD2P62316 118 aaKnown RBP17.64■□□□□ 0.41
CHD3-204ENST00000439235 GNG3P63215 75 aa17.64■□□□□ 0.41
CHD3-204ENST00000439235 TLE4Q04727 773 aa17.64■□□□□ 0.41
CHD3-204ENST00000439235 CNPY1Q3B7I2 92 aa17.64■□□□□ 0.41
CHD3-204ENST00000439235 SFXN4Q6P4A7 337 aa17.64■□□□□ 0.41
CHD3-204ENST00000439235 PNLDC1Q8NA58 520 aaKnown RBP17.64■□□□□ 0.41
CHD3-204ENST00000439235 RNF170Q96K19 258 aa17.64■□□□□ 0.41
CHD3-204ENST00000439235 SORCS2Q96PQ0 1159 aa17.64■□□□□ 0.41
CHD3-204ENST00000439235 DIRC2Q96SL1 478 aa17.64■□□□□ 0.41
CHD3-204ENST00000439235 GPER1Q99527 375 aa17.64■□□□□ 0.41
CHD3-204ENST00000439235 GFI1Q99684 422 aa17.64■□□□□ 0.41
CHD3-204ENST00000439235 CXXC4Q9H2H0 198 aa17.64■□□□□ 0.41
CHD3-204ENST00000439235 PLGRKTQ9HBL7 147 aa17.64■□□□□ 0.41
CHD3-204ENST00000439235 DYNLRB1Q9NP97 96 aa17.64■□□□□ 0.41
CHD3-204ENST00000439235 C14orf119Q9NWQ9 140 aa17.64■□□□□ 0.41
CHD3-204ENST00000439235 ZDHHC8Q9ULC8 765 aa17.64■□□□□ 0.41
CHD3-204ENST00000439235 HEATR1Q9H583 2144 aaKnown RBP17.63■□□□□ 0.41
CHD3-204ENST00000439235 PQLC2LA1A4F0 135 aa17.63■□□□□ 0.41
CHD3-204ENST00000439235 TMEM210A6NLX4 147 aa17.63■□□□□ 0.41
CHD3-204ENST00000439235 IFITM5A6NNB3 132 aa17.63■□□□□ 0.41
CHD3-204ENST00000439235 AIPO00170 330 aa17.63■□□□□ 0.41
CHD3-204ENST00000439235 ZNF182P17025 639 aaPredicted RBP17.63■□□□□ 0.41
CHD3-204ENST00000439235 TNFSF4P23510 183 aa17.63■□□□□ 0.41
CHD3-204ENST00000439235 GPM6AP51674 278 aa17.63■□□□□ 0.41
CHD3-204ENST00000439235 MTCP1P56278 107 aa17.63■□□□□ 0.41
CHD3-204ENST00000439235 CAV3P56539 151 aa17.63■□□□□ 0.41
CHD3-204ENST00000439235 KISS1Q15726 138 aa17.63■□□□□ 0.41
CHD3-204ENST00000439235 DGUOKQ16854 277 aa17.63■□□□□ 0.41
CHD3-204ENST00000439235 DMRTC1Q5HYR2 192 aa17.63■□□□□ 0.41
CHD3-204ENST00000439235 AGAP6Q5VW22 663 aa17.63■□□□□ 0.41
CHD3-204ENST00000439235 NR2C2APQ86WQ0 139 aa17.63■□□□□ 0.41
CHD3-204ENST00000439235 ZNF611Q8N823 705 aa17.63■□□□□ 0.41
CHD3-204ENST00000439235 OR2Z1Q8NG97 314 aa17.63■□□□□ 0.41
CHD3-204ENST00000439235 OR10AD1Q8NGE0 317 aa17.63■□□□□ 0.41
CHD3-204ENST00000439235 OR6M1Q8NGM8 313 aa17.63■□□□□ 0.41
CHD3-204ENST00000439235 AP3S1Q92572 193 aa17.63■□□□□ 0.41
CHD3-204ENST00000439235 ELMOD3Q96FG2 381 aa17.63■□□□□ 0.41
CHD3-204ENST00000439235 ZNF732B4DXR9 585 aa17.62■□□□□ 0.41
CHD3-204ENST00000439235 H0YL77 283 aa17.62■□□□□ 0.41
CHD3-204ENST00000439235 SLC17A2O00624 439 aa17.62■□□□□ 0.41
CHD3-204ENST00000439235 CTAG2O75638 210 aa17.62■□□□□ 0.41
CHD3-204ENST00000439235 CD37P11049 281 aa17.62■□□□□ 0.41
CHD3-204ENST00000439235 CFPP27918 469 aa17.62■□□□□ 0.41
CHD3-204ENST00000439235 C1orf100Q5SVJ3 147 aa17.62■□□□□ 0.41
CHD3-204ENST00000439235 ZNF573Q86YE8 665 aa17.62■□□□□ 0.41
CHD3-204ENST00000439235 GTF3AQ92664 365 aaKnown RBP17.62■□□□□ 0.41
CHD3-204ENST00000439235 SPACA5Q96QH8 159 aa17.62■□□□□ 0.41
CHD3-204ENST00000439235 UBTD1Q9HAC8 227 aa17.62■□□□□ 0.41
CHD3-204ENST00000439235 CBLN4Q9NTU7 201 aa17.62■□□□□ 0.41
CHD3-204ENST00000439235 DAPK2Q9UIK4 370 aa17.62■□□□□ 0.41
CHD3-204ENST00000439235 A0A1W2PPR1 153 aa17.61■□□□□ 0.41
CHD3-204ENST00000439235 SPRY3O43610 288 aa17.61■□□□□ 0.41
CHD3-204ENST00000439235 ADH4P08319 380 aa17.61■□□□□ 0.41
CHD3-204ENST00000439235 THBS2P35442 1172 aa17.61■□□□□ 0.41
CHD3-204ENST00000439235 RIN1Q13671 783 aa17.61■□□□□ 0.41
CHD3-204ENST00000439235 RAB11BQ15907 218 aa17.61■□□□□ 0.41
CHD3-204ENST00000439235 SWI5Q1ZZU3 235 aa17.61■□□□□ 0.41
CHD3-204ENST00000439235 MST1LQ2TV78 715 aa17.61■□□□□ 0.41
CHD3-204ENST00000439235 IDNKQ5T6J7 187 aa17.61■□□□□ 0.41
CHD3-204ENST00000439235 HES5Q5TA89 166 aa17.61■□□□□ 0.41
CHD3-204ENST00000439235 LYPD6Q86Y78 171 aa17.61■□□□□ 0.41
CHD3-204ENST00000439235 KCTD12Q96CX2 325 aaKnown RBP17.61■□□□□ 0.41
CHD3-204ENST00000439235 BARHL1Q9BZE3 327 aa17.61■□□□□ 0.41
CHD3-204ENST00000439235 FGF23Q9GZV9 251 aaPredicted RBP17.61■□□□□ 0.41
CHD3-204ENST00000439235 CLEC4MQ9H2X3 399 aaPredicted RBP17.61■□□□□ 0.41
CHD3-204ENST00000439235 MS4A5Q9H3V2 200 aa17.61■□□□□ 0.41
CHD3-204ENST00000439235 STEAP1Q9UHE8 339 aa17.61■□□□□ 0.41
CHD3-204ENST00000439235 SPTBN1Q01082 2364 aaKnown RBP17.6■□□□□ 0.41
CHD3-204ENST00000439235 LRP5LA4QPB2 252 aa17.6■□□□□ 0.41
CHD3-204ENST00000439235 C17orf100A8MU93 164 aa17.6■□□□□ 0.41
CHD3-204ENST00000439235 F5H5P2 479 aa17.6■□□□□ 0.41
CHD3-204ENST00000439235 IGHV1-46P01743 117 aa17.6■□□□□ 0.41
CHD3-204ENST00000439235 NAT2P11245 290 aa17.6■□□□□ 0.41
CHD3-204ENST00000439235 BMP4P12644 408 aa17.6■□□□□ 0.41
CHD3-204ENST00000439235 HTR2CP28335 458 aa17.6■□□□□ 0.41
CHD3-204ENST00000439235 CD200P41217 278 aa17.6■□□□□ 0.41
CHD3-204ENST00000439235 SRP9P49458 86 aaKnown RBP17.6■□□□□ 0.41
CHD3-204ENST00000439235 PPOXP50336 477 aa17.6■□□□□ 0.41
CHD3-204ENST00000439235 CAPZA1P52907 286 aa17.6■□□□□ 0.41
CHD3-204ENST00000439235 DTX2Q86UW9 622 aa17.6■□□□□ 0.41
CHD3-204ENST00000439235 CELF2-AS1Q8N7Q2 184 aa17.6■□□□□ 0.41
CHD3-204ENST00000439235 RFT1Q96AA3 541 aa17.6■□□□□ 0.41
CHD3-204ENST00000439235 PSMG3-AS1Q96PY0 264 aa17.6■□□□□ 0.41
CHD3-204ENST00000439235 MRI1Q9BV20 369 aa17.6■□□□□ 0.41
CHD3-204ENST00000439235 CNTD2Q9H8S5 307 aa17.6■□□□□ 0.41
CHD3-204ENST00000439235 PTTG2Q9NZH5 202 aa17.6■□□□□ 0.41
CHD3-204ENST00000439235 USP9XQ93008 2570 aaPredicted RBP17.59■□□□□ 0.41
CHD3-204ENST00000439235 IGKV1-27A0A075B6S5 117 aa17.59■□□□□ 0.41
CHD3-204ENST00000439235 SLC2A2P11168 524 aaPredicted RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms