RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 HAO2Q9NYQ3 351 aa6.39□□□□□ -1.39
VPS50-204ENST00000438395 ACTR3BQ9P1U1 418 aa6.39□□□□□ -1.39
VPS50-204ENST00000438395 SLC25A10Q9UBX3 287 aaPredicted RBP6.39□□□□□ -1.39
VPS50-204ENST00000438395 ZNF391Q9UJN7 358 aa6.39□□□□□ -1.39
VPS50-204ENST00000438395 ARL2BPQ9Y2Y0 163 aa6.39□□□□□ -1.39
VPS50-204ENST00000438395 RHBDD3Q9Y3P4 386 aa6.39□□□□□ -1.39
VPS50-204ENST00000438395 U3KQV3 271 aa6.39□□□□□ -1.39
VPS50-204ENST00000438395 TRRAPQ9Y4A5 3859 aa6.39□□□□□ -1.39
VPS50-204ENST00000438395 A0A0G2JK05 382 aa6.38□□□□□ -1.39
VPS50-204ENST00000438395 A0A1W2PPH5 198 aa6.38□□□□□ -1.39
VPS50-204ENST00000438395 FAM183AA6NL82 134 aa6.38□□□□□ -1.39
VPS50-204ENST00000438395 PRR23D1E9PI22 279 aaPredicted RBP6.38□□□□□ -1.39
VPS50-204ENST00000438395 H0YAE9 185 aa6.38□□□□□ -1.39
VPS50-204ENST00000438395 GNGT2O14610 69 aa6.38□□□□□ -1.39
VPS50-204ENST00000438395 ACOT8O14734 319 aa6.38□□□□□ -1.39
VPS50-204ENST00000438395 E2F6O75461 281 aa6.38□□□□□ -1.39
VPS50-204ENST00000438395 LHBP01229 141 aa6.38□□□□□ -1.39
VPS50-204ENST00000438395 GASTP01350 101 aa6.38□□□□□ -1.39
VPS50-204ENST00000438395 LYNP07948 512 aa6.38□□□□□ -1.39
VPS50-204ENST00000438395 CSF1P09603 554 aa6.38□□□□□ -1.39
VPS50-204ENST00000438395 PRR23D2P0DMB1 279 aaPredicted RBP6.38□□□□□ -1.39
VPS50-204ENST00000438395 CLUP10909 449 aa6.38□□□□□ -1.39
VPS50-204ENST00000438395 PSKH1P11801 424 aa6.38□□□□□ -1.39
VPS50-204ENST00000438395 ATP6V1B2P21281 511 aa6.38□□□□□ -1.39
VPS50-204ENST00000438395 SAA4P35542 130 aa6.38□□□□□ -1.39
VPS50-204ENST00000438395 OPRL1P41146 370 aa6.38□□□□□ -1.39
VPS50-204ENST00000438395 GABRA2P47869 451 aa6.38□□□□□ -1.39
VPS50-204ENST00000438395 HMGA2P52926 109 aa6.38□□□□□ -1.39
VPS50-204ENST00000438395 PRDX4Q13162 271 aa6.38□□□□□ -1.39
VPS50-204ENST00000438395 KLHL12Q53G59 568 aa6.38□□□□□ -1.39
VPS50-204ENST00000438395 STUMQ69YW2 141 aa6.38□□□□□ -1.39
VPS50-204ENST00000438395 METAP1DQ6UB28 335 aaPredicted RBP6.38□□□□□ -1.39
VPS50-204ENST00000438395 RHOUQ7L0Q8 258 aa6.38□□□□□ -1.39
VPS50-204ENST00000438395 WDR86Q86TI4 376 aa6.38□□□□□ -1.39
VPS50-204ENST00000438395 DHFR2Q86XF0 187 aa6.38□□□□□ -1.39
VPS50-204ENST00000438395 ZDHHC23Q8IYP9 409 aa6.38□□□□□ -1.39
VPS50-204ENST00000438395 ARHGAP24Q8N264 748 aa6.38□□□□□ -1.39
VPS50-204ENST00000438395 IQCF1Q8N6M8 205 aa6.38□□□□□ -1.39
VPS50-204ENST00000438395 DTX3Q8N9I9 347 aa6.38□□□□□ -1.39
VPS50-204ENST00000438395 TMEM185AQ8NFB2 350 aa6.38□□□□□ -1.39
VPS50-204ENST00000438395 OR10G2Q8NGC3 310 aa6.38□□□□□ -1.39
VPS50-204ENST00000438395 OR5T2Q8NGG2 359 aa6.38□□□□□ -1.39
VPS50-204ENST00000438395 OR51G2Q8NGK0 314 aa6.38□□□□□ -1.39
VPS50-204ENST00000438395 OR5D13Q8NGL4 314 aa6.38□□□□□ -1.39
VPS50-204ENST00000438395 OR10Z1Q8NGY1 313 aa6.38□□□□□ -1.39
VPS50-204ENST00000438395 OR4Q3Q8NH05 313 aa6.38□□□□□ -1.39
VPS50-204ENST00000438395 THEM6Q8WUY1 208 aa6.38□□□□□ -1.39
VPS50-204ENST00000438395 RPL3LQ92901 407 aaKnown RBP6.38□□□□□ -1.39
VPS50-204ENST00000438395 SGK3Q96BR1 496 aa6.38□□□□□ -1.39
VPS50-204ENST00000438395 RNF170Q96K19 258 aa6.38□□□□□ -1.39
VPS50-204ENST00000438395 DCTN5Q9BTE1 182 aa6.38□□□□□ -1.39
VPS50-204ENST00000438395 DGCR6LQ9BY27 220 aa6.38□□□□□ -1.39
VPS50-204ENST00000438395 NMNAT2Q9BZQ4 307 aa6.38□□□□□ -1.39
VPS50-204ENST00000438395 OR51V1Q9H2C8 321 aa6.38□□□□□ -1.39
VPS50-204ENST00000438395 SEMA6AQ9H2E6 1030 aa6.38□□□□□ -1.39
VPS50-204ENST00000438395 PPA2Q9H2U2 334 aa6.38□□□□□ -1.39
VPS50-204ENST00000438395 NIPAL2Q9H841 368 aa6.38□□□□□ -1.39
VPS50-204ENST00000438395 MED20Q9H944 212 aa6.38□□□□□ -1.39
VPS50-204ENST00000438395 SNTG1Q9NSN8 517 aa6.38□□□□□ -1.39
VPS50-204ENST00000438395 ZNRD1Q9P1U0 126 aa6.38□□□□□ -1.39
VPS50-204ENST00000438395 DOCK11Q5JSL3 2073 aa6.37□□□□□ -1.39
VPS50-204ENST00000438395 TRBV23-1A0A0A0MS06 115 aa6.37□□□□□ -1.39
VPS50-204ENST00000438395 ZNF816-ZNF321PA0A0X1KG74 233 aa6.37□□□□□ -1.39
VPS50-204ENST00000438395 A0A1B0GW55 424 aa6.37□□□□□ -1.39
VPS50-204ENST00000438395 hCG_1809904A0A1W2PP81 198 aa6.37□□□□□ -1.39
VPS50-204ENST00000438395 A0A1W2PPE2 198 aa6.37□□□□□ -1.39
VPS50-204ENST00000438395 A0A1W2PR64 198 aa6.37□□□□□ -1.39
VPS50-204ENST00000438395 A0A1W2PRV1 198 aa6.37□□□□□ -1.39
VPS50-204ENST00000438395 ZNF850A8MQ14 1090 aa6.37□□□□□ -1.39
VPS50-204ENST00000438395 M0R1W7 72 aa6.37□□□□□ -1.39
VPS50-204ENST00000438395 AKR7A2O43488 359 aa6.37□□□□□ -1.39
VPS50-204ENST00000438395 ANGPTL7O43827 346 aa6.37□□□□□ -1.39
VPS50-204ENST00000438395 CLPXO76031 633 aa6.37□□□□□ -1.39
VPS50-204ENST00000438395 GLCEO94923 617 aa6.37□□□□□ -1.39
VPS50-204ENST00000438395 DUX4L2P0CJ85 424 aa6.37□□□□□ -1.39
VPS50-204ENST00000438395 DUX4L3P0CJ86 424 aa6.37□□□□□ -1.39
VPS50-204ENST00000438395 DUX4L4P0CJ87 422 aa6.37□□□□□ -1.39
VPS50-204ENST00000438395 DUX4L5P0CJ88 424 aa6.37□□□□□ -1.39
VPS50-204ENST00000438395 DUX4L6P0CJ89 424 aa6.37□□□□□ -1.39
VPS50-204ENST00000438395 DUX4L7P0CJ90 424 aa6.37□□□□□ -1.39
VPS50-204ENST00000438395 ANOS1P23352 680 aa6.37□□□□□ -1.39
VPS50-204ENST00000438395 GLRA1P23415 457 aa6.37□□□□□ -1.39
VPS50-204ENST00000438395 MAGEA2P43356 314 aa6.37□□□□□ -1.39
VPS50-204ENST00000438395 GPM6AP51674 278 aa6.37□□□□□ -1.39
VPS50-204ENST00000438395 UBE2E1P51965 193 aa6.37□□□□□ -1.39
VPS50-204ENST00000438395 PROK1P58294 105 aa6.37□□□□□ -1.39
VPS50-204ENST00000438395 GNG3P63215 75 aa6.37□□□□□ -1.39
VPS50-204ENST00000438395 EGR3Q06889 387 aa6.37□□□□□ -1.39
VPS50-204ENST00000438395 ACSM1Q08AH1 577 aa6.37□□□□□ -1.39
VPS50-204ENST00000438395 PPP1R8Q12972 351 aaKnown RBP6.37□□□□□ -1.39
VPS50-204ENST00000438395 KLRD1Q13241 179 aa6.37□□□□□ -1.39
VPS50-204ENST00000438395 GK3PQ14409 553 aa6.37□□□□□ -1.39
VPS50-204ENST00000438395 MICAQ29983 383 aa6.37□□□□□ -1.39
VPS50-204ENST00000438395 SMIM21Q3B7S5 101 aa6.37□□□□□ -1.39
VPS50-204ENST00000438395 ASPHD2Q6ICH7 369 aa6.37□□□□□ -1.39
VPS50-204ENST00000438395 ZNF770Q6IQ21 691 aaPredicted RBP6.37□□□□□ -1.39
VPS50-204ENST00000438395 C11orf88Q6PI97 169 aa6.37□□□□□ -1.39
VPS50-204ENST00000438395 DUX4L9Q6RFH8 374 aaPredicted RBP6.37□□□□□ -1.39
VPS50-204ENST00000438395 THAP5Q7Z6K1 395 aa6.37□□□□□ -1.39
VPS50-204ENST00000438395 KRT77Q7Z794 578 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms