RNA–Protein interactions for RNA: ENST00000435823.1

COL28A1-203, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL28A1, Length 678 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-203ENST00000435823 SRD5A1P18405 259 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 CCL1P22362 96 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 GATA3P23771 443 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 CD80P33681 288 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 THBS2P35442 1172 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 SRP14P37108 136 aaKnown RBP9.59□□□□□ -0.87
COL28A1-203ENST00000435823 GPM6AP51674 278 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 OR12D2P58182 307 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 GNG3P63215 75 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 CSNK2BP67870 215 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 ADARB1P78563 741 aaKnown RBP9.59□□□□□ -0.87
COL28A1-203ENST00000435823 GALEQ14376 348 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 CEACAM21Q3KPI0 293 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 WDR38Q5JTN6 314 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 CLVS2Q5SYC1 327 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 DCAF12L2Q5VW00 463 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 SFRP4Q6FHJ7 346 aaPredicted RBP9.59□□□□□ -0.87
COL28A1-203ENST00000435823 DCDC5Q6ZRR9 648 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 IL17RELQ6ZVW7 336 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 WDR86Q86TI4 376 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 LHFPL3Q86UP9 236 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 EGFL6Q8IUX8 553 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 C8orf59Q8N0T1 100 aaPredicted RBP9.59□□□□□ -0.87
COL28A1-203ENST00000435823 SYS1Q8N2H4 156 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 GCSAMQ8N6F7 178 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 C19orf18Q8NEA5 215 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 DEFB108BQ8NET1 73 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 OR5A2Q8NGI9 324 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 OR14K1Q8NGZ2 314 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 CNIH3Q8TBE1 160 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 LRRC29Q8WV35 223 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 HPSE2Q8WWQ2 592 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 C4orf36Q96KX1 117 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 TLNRD1Q9H1K6 362 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 METTL17Q9H7H0 456 aaPredicted RBP9.59□□□□□ -0.87
COL28A1-203ENST00000435823 MRPS18AQ9NVS2 196 aaKnown RBP9.59□□□□□ -0.87
COL28A1-203ENST00000435823 NKX1-2Q9UD57 310 aaPredicted RBP9.59□□□□□ -0.87
COL28A1-203ENST00000435823 OR5V1Q9UGF6 321 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 MYRFQ9Y2G1 1151 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 HSPE1-MOB4S4R3N1 261 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 V9GYS6 101 aa9.59□□□□□ -0.87
COL28A1-203ENST00000435823 PPIAL4CA0A0B4J2A2 164 aa9.58□□□□□ -0.88
COL28A1-203ENST00000435823 A8MXK9 166 aa9.58□□□□□ -0.88
COL28A1-203ENST00000435823 ZNF732B4DXR9 585 aa9.58□□□□□ -0.88
COL28A1-203ENST00000435823 J3QLI3 93 aa9.58□□□□□ -0.88
COL28A1-203ENST00000435823 NDUFA2O43678 99 aa9.58□□□□□ -0.88
COL28A1-203ENST00000435823 WBP4O75554 376 aaKnown RBP9.58□□□□□ -0.88
COL28A1-203ENST00000435823 PITPNBP48739 271 aa9.58□□□□□ -0.88
COL28A1-203ENST00000435823 GNB2P62879 340 aa9.58□□□□□ -0.88
COL28A1-203ENST00000435823 MRPL28Q13084 256 aaKnown RBP9.58□□□□□ -0.88
COL28A1-203ENST00000435823 SMN1Q16637 294 aaKnown RBP9.58□□□□□ -0.88
COL28A1-203ENST00000435823 FAM76BQ5HYJ3 339 aa9.58□□□□□ -0.88
COL28A1-203ENST00000435823 TMEM244Q5VVB8 128 aa9.58□□□□□ -0.88
COL28A1-203ENST00000435823 FDX2Q6P4F2 183 aa9.58□□□□□ -0.88
COL28A1-203ENST00000435823 WDR82Q6UXN9 313 aa9.58□□□□□ -0.88
COL28A1-203ENST00000435823 Q6ZSR3 168 aa9.58□□□□□ -0.88
COL28A1-203ENST00000435823 C11orf53Q8IXP5 236 aa9.58□□□□□ -0.88
COL28A1-203ENST00000435823 PRSS35Q8N3Z0 413 aa9.58□□□□□ -0.88
COL28A1-203ENST00000435823 SCCPDHQ8NBX0 429 aa9.58□□□□□ -0.88
COL28A1-203ENST00000435823 OR52I1Q8NGK6 324 aa9.58□□□□□ -0.88
COL28A1-203ENST00000435823 OR10Z1Q8NGY1 313 aa9.58□□□□□ -0.88
COL28A1-203ENST00000435823 OR2G2Q8NGZ5 317 aa9.58□□□□□ -0.88
COL28A1-203ENST00000435823 HAVCR2Q8TDQ0 301 aa9.58□□□□□ -0.88
COL28A1-203ENST00000435823 RPL3LQ92901 407 aaKnown RBP9.58□□□□□ -0.88
COL28A1-203ENST00000435823 SSBP3Q9BWW4 388 aaPredicted RBP9.58□□□□□ -0.88
COL28A1-203ENST00000435823 ERVK13-1Q9NX77 482 aa9.58□□□□□ -0.88
COL28A1-203ENST00000435823 LOC107986453A0A1B0GWG9 222 aa9.57□□□□□ -0.88
COL28A1-203ENST00000435823 H3BSH0 61 aa9.57□□□□□ -0.88
COL28A1-203ENST00000435823 GATBO75879 557 aaKnown RBP9.57□□□□□ -0.88
COL28A1-203ENST00000435823 SERPINA3P01011 423 aa9.57□□□□□ -0.88
COL28A1-203ENST00000435823 LHBP01229 141 aa9.57□□□□□ -0.88
COL28A1-203ENST00000435823 MUC1P15941 1255 aaPredicted RBP9.57□□□□□ -0.88
COL28A1-203ENST00000435823 EGR1P18146 543 aa9.57□□□□□ -0.88
COL28A1-203ENST00000435823 ZFP36P26651 326 aaKnown RBP9.57□□□□□ -0.88
COL28A1-203ENST00000435823 DCKP27707 260 aa9.57□□□□□ -0.88
COL28A1-203ENST00000435823 CFHR2P36980 270 aa9.57□□□□□ -0.88
COL28A1-203ENST00000435823 KIR3DL2P43630 455 aa9.57□□□□□ -0.88
COL28A1-203ENST00000435823 CCR9P51686 369 aa9.57□□□□□ -0.88
COL28A1-203ENST00000435823 SEC61A1P61619 476 aaKnown RBP9.57□□□□□ -0.88
COL28A1-203ENST00000435823 MED21Q13503 144 aa9.57□□□□□ -0.88
COL28A1-203ENST00000435823 ALKBH1Q13686 389 aaKnown RBP9.57□□□□□ -0.88
COL28A1-203ENST00000435823 MICBQ29980 383 aa9.57□□□□□ -0.88
COL28A1-203ENST00000435823 KRTAP21-3Q3LHN1 58 aa9.57□□□□□ -0.88
COL28A1-203ENST00000435823 TEX36Q5VZQ5 186 aa9.57□□□□□ -0.88
COL28A1-203ENST00000435823 TMEM42Q69YG0 159 aa9.57□□□□□ -0.88
COL28A1-203ENST00000435823 ZNF671Q8TAW3 534 aa9.57□□□□□ -0.88
COL28A1-203ENST00000435823 C10orf35Q96D05 121 aa9.57□□□□□ -0.88
COL28A1-203ENST00000435823 PELI1Q96FA3 418 aa9.57□□□□□ -0.88
COL28A1-203ENST00000435823 TECTBQ96PL2 329 aa9.57□□□□□ -0.88
COL28A1-203ENST00000435823 VCX3BQ9H321 246 aa9.57□□□□□ -0.88
COL28A1-203ENST00000435823 FGF20Q9NP95 211 aaPredicted RBP9.57□□□□□ -0.88
COL28A1-203ENST00000435823 GPR173Q9NS66 373 aa9.57□□□□□ -0.88
COL28A1-203ENST00000435823 ERVK-18Q9QC07 812 aa9.57□□□□□ -0.88
COL28A1-203ENST00000435823 CLN8Q9UBY8 286 aa9.57□□□□□ -0.88
COL28A1-203ENST00000435823 POLR3KQ9Y2Y1 108 aaPredicted RBP9.57□□□□□ -0.88
COL28A1-203ENST00000435823 NAV3Q8IVL0 2385 aa9.57□□□□□ -0.88
COL28A1-203ENST00000435823 ANKRD61A6NGH8 418 aa9.56□□□□□ -0.88
COL28A1-203ENST00000435823 A6NIN4 97 aa9.56□□□□□ -0.88
COL28A1-203ENST00000435823 SRRM5B3KS81 715 aa9.56□□□□□ -0.88
COL28A1-203ENST00000435823 PHF1O43189 567 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms