RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 UBE2V2Q15819 145 aa10.22□□□□□ -0.77
HMGCS1-202ENST00000433297 VAX1Q5SQQ9 334 aa10.22□□□□□ -0.77
HMGCS1-202ENST00000433297 TGIF2LXQ8IUE1 241 aa10.22□□□□□ -0.77
HMGCS1-202ENST00000433297 ZNF2Q9BSG1 426 aaPredicted RBP10.22□□□□□ -0.77
HMGCS1-202ENST00000433297 PBOV1Q9GZY1 135 aa10.22□□□□□ -0.77
HMGCS1-202ENST00000433297 TXNIPQ9H3M7 391 aa10.22□□□□□ -0.77
HMGCS1-202ENST00000433297 MED29Q9NX70 200 aa10.22□□□□□ -0.77
HMGCS1-202ENST00000433297 A8MVM7 634 aa10.21□□□□□ -0.77
HMGCS1-202ENST00000433297 SLC33A1O00400 549 aaPredicted RBP10.21□□□□□ -0.77
HMGCS1-202ENST00000433297 CDC14BO60729 498 aa10.21□□□□□ -0.77
HMGCS1-202ENST00000433297 C5AR1P21730 350 aa10.21□□□□□ -0.77
HMGCS1-202ENST00000433297 OMGP23515 440 aa10.21□□□□□ -0.77
HMGCS1-202ENST00000433297 AFF3P51826 1226 aaKnown RBP10.21□□□□□ -0.77
HMGCS1-202ENST00000433297 LSM6P62312 80 aaKnown RBP10.21□□□□□ -0.77
HMGCS1-202ENST00000433297 C19orf47Q8N9M1 422 aaKnown RBP10.21□□□□□ -0.77
HMGCS1-202ENST00000433297 HOXB13Q92826 284 aaPredicted RBP10.21□□□□□ -0.77
HMGCS1-202ENST00000433297 MUCL1Q96DR8 90 aa10.21□□□□□ -0.77
HMGCS1-202ENST00000433297 ABHD14AQ9BUJ0 271 aa10.21□□□□□ -0.77
HMGCS1-202ENST00000433297 PISDQ9UG56 409 aa10.21□□□□□ -0.77
HMGCS1-202ENST00000433297 WASF3Q9UPY6 502 aa10.21□□□□□ -0.77
HMGCS1-202ENST00000433297 ARHGEF17Q96PE2 2063 aaPredicted RBP10.21□□□□□ -0.77
HMGCS1-202ENST00000433297 IGKV1D-43A0A0B4J1Z2 117 aa10.21□□□□□ -0.77
HMGCS1-202ENST00000433297 GAPDHP04406 335 aaKnown RBP10.21□□□□□ -0.77
HMGCS1-202ENST00000433297 BLVRBP30043 206 aaPredicted RBP10.21□□□□□ -0.77
HMGCS1-202ENST00000433297 ERVFRD-1P60508 538 aa10.21□□□□□ -0.77
HMGCS1-202ENST00000433297 IL15RAQ13261 267 aa10.21□□□□□ -0.77
HMGCS1-202ENST00000433297 TSPO2Q5TGU0 170 aa10.21□□□□□ -0.77
HMGCS1-202ENST00000433297 NAXEQ8NCW5 288 aa10.21□□□□□ -0.77
HMGCS1-202ENST00000433297 LYPD6BQ8NI32 183 aa10.21□□□□□ -0.77
HMGCS1-202ENST00000433297 SCRT1Q9BWW7 348 aa10.21□□□□□ -0.77
HMGCS1-202ENST00000433297 UNKLQ9H9P5 680 aaKnown RBP10.21□□□□□ -0.77
HMGCS1-202ENST00000433297 B3GALT1Q9Y5Z6 326 aa10.21□□□□□ -0.77
HMGCS1-202ENST00000433297 HS3ST3B1Q9Y662 390 aa10.21□□□□□ -0.77
HMGCS1-202ENST00000433297 ASCC3Q8N3C0 2202 aaKnown RBP10.21□□□□□ -0.78
HMGCS1-202ENST00000433297 FIGNL2A6NMB9 653 aa10.21□□□□□ -0.78
HMGCS1-202ENST00000433297 TMEM14DPA8MWL7 114 aa10.21□□□□□ -0.78
HMGCS1-202ENST00000433297 MASP2O00187 686 aa10.21□□□□□ -0.78
HMGCS1-202ENST00000433297 SCGNO76038 276 aa10.21□□□□□ -0.78
HMGCS1-202ENST00000433297 ISG15P05161 165 aa10.21□□□□□ -0.78
HMGCS1-202ENST00000433297 GP1BBP13224 206 aa10.21□□□□□ -0.78
HMGCS1-202ENST00000433297 G0S2P27469 103 aa10.21□□□□□ -0.78
HMGCS1-202ENST00000433297 FXYD4P59646 89 aa10.21□□□□□ -0.78
HMGCS1-202ENST00000433297 DLK1P80370 383 aa10.21□□□□□ -0.78
HMGCS1-202ENST00000433297 BEND4Q6ZU67 534 aa10.21□□□□□ -0.78
HMGCS1-202ENST00000433297 LYPD6Q86Y78 171 aa10.21□□□□□ -0.78
HMGCS1-202ENST00000433297 C1QL4Q86Z23 238 aa10.21□□□□□ -0.78
HMGCS1-202ENST00000433297 KCNG3Q8TAE7 436 aa10.21□□□□□ -0.78
HMGCS1-202ENST00000433297 EMG1Q92979 244 aaKnown RBP10.21□□□□□ -0.78
HMGCS1-202ENST00000433297 NUDT22Q9BRQ3 303 aa10.21□□□□□ -0.78
HMGCS1-202ENST00000433297 CCDC163A0A0D9SF12 145 aa10.2□□□□□ -0.78
HMGCS1-202ENST00000433297 C2orf72A6NCS6 295 aa10.2□□□□□ -0.78
HMGCS1-202ENST00000433297 OR5H15A6NDH6 313 aa10.2□□□□□ -0.78
HMGCS1-202ENST00000433297 PRR19A6NJB7 356 aa10.2□□□□□ -0.78
HMGCS1-202ENST00000433297 OR5H1A6NKK0 313 aa10.2□□□□□ -0.78
HMGCS1-202ENST00000433297 ZNF705GA8MUZ8 300 aaPredicted RBP10.2□□□□□ -0.78
HMGCS1-202ENST00000433297 TCAPO15273 167 aa10.2□□□□□ -0.78
HMGCS1-202ENST00000433297 GSTP1P09211 210 aaKnown RBP10.2□□□□□ -0.78
HMGCS1-202ENST00000433297 SNRPCP09234 159 aaKnown RBP10.2□□□□□ -0.78
HMGCS1-202ENST00000433297 RPS2P15880 293 aaKnown RBP10.2□□□□□ -0.78
HMGCS1-202ENST00000433297 PKIAP61925 76 aa10.2□□□□□ -0.78
HMGCS1-202ENST00000433297 CHAF1BQ13112 559 aa10.2□□□□□ -0.78
HMGCS1-202ENST00000433297 SGCBQ16585 318 aa10.2□□□□□ -0.78
HMGCS1-202ENST00000433297 PCK2Q16822 640 aa10.2□□□□□ -0.78
HMGCS1-202ENST00000433297 C17orf78Q8N4C9 275 aa10.2□□□□□ -0.78
HMGCS1-202ENST00000433297 COMMD1Q8N668 190 aa10.2□□□□□ -0.78
HMGCS1-202ENST00000433297 ZNF519Q8TB69 540 aa10.2□□□□□ -0.78
HMGCS1-202ENST00000433297 VWCEQ96DN2 955 aa10.2□□□□□ -0.78
HMGCS1-202ENST00000433297 SLAMF6Q96DU3 332 aa10.2□□□□□ -0.78
HMGCS1-202ENST00000433297 TBL1XR1Q9BZK7 514 aa10.2□□□□□ -0.78
HMGCS1-202ENST00000433297 A0A087WZY1 265 aa10.2□□□□□ -0.78
HMGCS1-202ENST00000433297 NPIPA5E9PKD4 350 aa10.2□□□□□ -0.78
HMGCS1-202ENST00000433297 MBPP02686 304 aaPredicted RBP10.2□□□□□ -0.78
HMGCS1-202ENST00000433297 SEC11BP0C7V7 166 aa10.2□□□□□ -0.78
HMGCS1-202ENST00000433297 IL12BP29460 328 aa10.2□□□□□ -0.78
HMGCS1-202ENST00000433297 ELOBQ15370 118 aa10.2□□□□□ -0.78
HMGCS1-202ENST00000433297 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.2□□□□□ -0.78
HMGCS1-202ENST00000433297 ARMC6Q6NXE6 501 aa10.2□□□□□ -0.78
HMGCS1-202ENST00000433297 CPEB2Q7Z5Q1 589 aaKnown RBP10.2□□□□□ -0.78
HMGCS1-202ENST00000433297 PRSS58Q8IYP2 241 aa10.2□□□□□ -0.78
HMGCS1-202ENST00000433297 DAZLQ92904 295 aaKnown RBP10.2□□□□□ -0.78
HMGCS1-202ENST00000433297 CPNE4Q96A23 557 aaPredicted RBP10.2□□□□□ -0.78
HMGCS1-202ENST00000433297 ELSPBP1Q96BH3 223 aa10.2□□□□□ -0.78
HMGCS1-202ENST00000433297 ATG101Q9BSB4 218 aa10.2□□□□□ -0.78
HMGCS1-202ENST00000433297 URM1Q9BTM9 101 aaKnown RBP10.2□□□□□ -0.78
HMGCS1-202ENST00000433297 VSX1Q9NZR4 365 aaPredicted RBP10.2□□□□□ -0.78
HMGCS1-202ENST00000433297 NPIPA1Q9UND3 350 aa10.2□□□□□ -0.78
HMGCS1-202ENST00000433297 LIPGQ9Y5X9 500 aa10.2□□□□□ -0.78
HMGCS1-202ENST00000433297 SEC16AO15027 2179 aa10.2□□□□□ -0.78
HMGCS1-202ENST00000433297 A0A0J9YY10 115 aa10.2□□□□□ -0.78
HMGCS1-202ENST00000433297 SRSF10O75494 262 aaKnown RBP10.2□□□□□ -0.78
HMGCS1-202ENST00000433297 TRGC1P0CF51 173 aa10.2□□□□□ -0.78
HMGCS1-202ENST00000433297 ZNF385CQ66K41 422 aaPredicted RBP10.2□□□□□ -0.78
HMGCS1-202ENST00000433297 ADAM19Q9H013 955 aa10.2□□□□□ -0.78
HMGCS1-202ENST00000433297 PRODH2Q9UF12 536 aa10.2□□□□□ -0.78
HMGCS1-202ENST00000433297 OSGIN2Q9Y236 505 aa10.2□□□□□ -0.78
HMGCS1-202ENST00000433297 TMED7-TICAM2A0A0A6YYA0 188 aa10.19□□□□□ -0.78
HMGCS1-202ENST00000433297 RBFOX3A6NFN3 312 aa10.19□□□□□ -0.78
HMGCS1-202ENST00000433297 CYTIPO60759 359 aa10.19□□□□□ -0.78
HMGCS1-202ENST00000433297 GJA4P35212 333 aa10.19□□□□□ -0.78
HMGCS1-202ENST00000433297 TM4SF4P48230 202 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms